Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_03g0012280 | OGI:03023930 | 15/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr03:9020730-9024127 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CAGCCCCCTTAATAGTTTTAATTTCAACACAAGCAAATCTGATTCCAAAGTCCGGTGGCGGGTGTACTCGTTCATTTGTTACTGCCCCCATTTCCAATATAATACAACAGTGAACCGAATGTACACGTACAACAATGTTGACTATAGTTGATTGTAACTCTACAAATGATCGTTACTTGCTGTAAGCTCTGCCTTTTGTGTGTAGGCAGGTAAGGGGGGAAAATAATCGGTCATCCAAAATTACTGGATCGTTGCATATGTTTCTTGTTTCATTTTCATTAAGTTGCTCTCTATGCCTCTTAACACAGGTCTATATCTGCATAAGTGATGGCAACAGTTAAATTTCACCAAACAGAGGGGAAAATAAAATGCAGAATCGGACAAACAATAATAGTATACTTACAGGCGTGCGAGGTTATTCTGCGCTTGCACCGCTTTTCTGAGTTCAGCTGAAAGTTTCATTATTTCTGCCGACAACCCCTCGGATCTGCTCTGTTCTTTGATGAGCTGATCCTGTAGACAATGAAATATGCAGTTGTAAACCAATGACATGACAATAAATAGATTTGACTAGTCATGGTATAGACAAGAAAATATTCTCGACAGCTCCAGCAATCAACCTTTAGGGAGAGATTCTCAGTTACAAACTCTGGCGGGAATGAAATGCTGGTCTCGTTCTGCCCATCTGGCTGGATAGTGGTATTACTTGTTTTCAATAGAGTAGCTTGCTCAAGTCTTAACTTCTCTAAGTGAGAGCGTAGCTCTTCATTTTGCTTGAGACAATCTTTTACCTGGAAATTGTGATTAATTGAACACGCAAGATGCTGGTATCATCCATAAATGATAAATGTTTGTCTCTCCATGCATGAAATGACTGATAACAGCACACCTGGTTTTCCCATTGCATTGTAACAGCTACAGCTTCTTGGTATGAAGTAGACAAGGCTGAGTTCTCCTCAAACAGCTTTTCTATTTCTGATGATTGAGAATCAATCTGTCAAACACAATCCAAAACTTAGCCAGCTCATTGGGAACTTATTTTGTTCAAAGAAAAGGAAGGCAGCATCAAACACCTCCATTAACAACTTTTGGCGGCTGCCCTCTAGCCTCTCAACCATCAAAGCCATATCATGCAATTGGCTTTCAAGTTTTTCCCTATCTTCCTGCATAATTAAAAAATGGCCAGTACAGTTTAAGATTGATTCGAGCCCAGCAAGAAGATTACGGCGAACACTTAGCATTACAAGTTTCTAATCACCCCTGAAAATTTTGAATTAAGACAAGGGCATTCAGGCTTACAGGTGTCCACCTAGCCTGTTGTAATGCAAGATCTCATCTCAGTTTTACTTTTGAGTCCTTGATAACTATGGACTAACACATGAAGTATTTACCTTGGCAAAATCTTAACTCATGGAAAAACAAAAAACTTGAAGTTTGTTCGATACATTACCATTGAAAATGCCTTGCGTGCAGCAAATTCAGAAGCTTCATCTGCATGGTAGGGGAAACTTATTTCATGCAGTTTACCAGTAAAATATGGAATATCTGAAGGAACGGAAAGCAGAGCAGCATGACAAATGTGGAAGTAAAAGACTATGCTGAATGGCACGTTTACTAGAGATAGAGTACCCTATATGAAGCTACAAAATATGTTTCATATGCACCTGATGCTTTCTTCGTCAAGGCAGCAATTTTTTCTTCCAACTCTTTCTTTTCCGCAACCAAGGAAGCAGCATGAGACTGTTCTCCAGTTAGCTTTTGTTGCTCTTGTTGCCTTAATAGGGACTCTTCAGAAAGTTTCTGTTGCTCCTGCTGCCTTAGCAATGATTCTTGCTGCATTAACCATTTTATATGTTAGTTTGCTTAGATAGAATAATCAATAATAAGGACAAGCATAACACTGAAGCAAGACAAAATGACCTACCTTCAGCTGAGCCTGCAAATTTTCTACCTCCTTTTCCATAGCAAGAATGTGCTCATTTGATACACCAACTGGAAATCCAGTATAAGAGTTGCTCATTACTTGCTGCTGCAGGGTATTTAACTGTGCTCTCAATGATGCAGAGTCCTCTTCTGCCTGTAAATCATAAGATTAGCACACTAATGATATGACTAAGGATGCACAATTTTTCAAAATACCCTGTATTGCTCCTCTTCTGCCTCCTTCAGTCGTTTCTTCATGCTCCTTAGTTGTGCGAGAGCATCCTCCTACTTAGCATACCAGGTAGAAGTGATAATGGGGATTAGACATATCAGAATCGTGAATACCATAAACACGAAGACAGTCAAGTACCTTAGCAACAGCTGCGGCATCTTTCTCCAAAGAAATGTCATTCACAGCCTTTTTCAAGGAGGGTACTATATTCCGCTCCTGCAAACAGCGAATTAATCCCCAAAGTAAAACGCGTGCAAAATGTAAGCCATATGCATCAAACTGCAACACAAGTACCAAATTAAAATGCACAATATGAAACTCACAAGGTCGTTCAAGCGGTTAACGAGGGAATCCTTCTCGACTTCCTTCTCAGCAATCTAGACGAAGCTATGCTTTGTTAATACTACTTCATCCTTCAGGTAACTGTACCACAACAATACTGAACTGCAGAGAAAATACCTTGGATAACAGCATTTGGTTTTCCCTCTCCAATGCTATGTTCCCATTTTCAAGTTCTCTAACTCGACCAAGAAGCTACCATTCATACCAAAAGCCTTAGTTATAGTCTAGAAACAACATGAGAATTTGGATACGTACTTGCCACGATCAATGTTCATCCGAACTATTCGACACAAAGGAAAGGGGGGCAAACCTCAGCTCCGGCTCCTGGGTTCCCTACAGAAAACAATCGCCATTAAGCCCACAAGATTAGCACTGAACTACGAACTGTTCCAGGGGAAGAGAGGGATGGACCAACCGTAAGGGTCGACAAGGGACGCCGCGGCGGCCGGGTTGTGCTGCTGCTGCATCCTCTCGGCGGCTCTCTTCTGCCGGATCTCCTCCAGCTGCCAGACAAACGCGCACACAAACCCCAACACAAATTTGAGCCTCAAATCCCAGATACAAACGAGACGCGGATCTGAAACGCCTCGCGTCACAGAGAAGCAGGAGGGAGAGGAGAGGAGAGGCATACGGTGCGGCGCCCCCGCGAGGCGTGATTGGCTTCCATCTCCGGCGACCGGCCGACGAACCGGTCGGCTTTCTGGAAGCTCGGGATCCGGAGGCGCGACGCGAAGGAGGATGGCCGATGGCGGGGGCTCCTCCGGTATCGCCTCGATCCTGTGATGCCCGGAGAAGAGAAGGGGAAGAAACCCAAACTCGTGGGCCTAGCCAACGTGTTGGCCTTCTAGAGTTCACAAGCCGGCCCGTACGAGCCCGATCGGGCAGGTTATTCAGTACCCCC
More
|
||||||||||
| CDS seq | ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA
More
|
||||||||||
| Protein seq | MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNPGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0012280 | OsAzu_03g0012280.04 | Chr03 | 9020730 | 9024127 | - | NAM | ||
| CDS seq | ATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA
More
|
|||||||
| Protein seq | MLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0012280 | OsAzu_03g0012280.02 | Chr03 | 9020730 | 9024127 | - | NAM | ||
| CDS seq | ATGAACATTGATCGTGGCAAAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA
More
|
|||||||
| Protein seq | MNIDRGKELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0012280 | OsAzu_03g0012280.03 | Chr03 | 9020730 | 9024127 | - | NAM | ||
| CDS seq | ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA
More
|
|||||||
| Protein seq | MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0012280 | OsAzu_03g0012280.01 | Chr03 | 9020730 | 9024127 | - | NAM | ||
| CDS seq | ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA
More
|
|||||||
| Protein seq | MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNPGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0012280 | OsAzu_03g0012280.05 | Chr03 | 9020751 | 9024038 | - | IsoSeq | ||
| CDS seq | GGTTTCTTCCCCTTCTCTTCTCCGGGCATCACAGGATCGAGGCGATACCGGAGGAGCCCCCGCCATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGGTTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGGTGTTTGATGCTGCCTTCCTTTTCTTTGAACAAAATAAGTTCCCAATGAGCTGGCTAAGTTTTGGATTGTGTTTGACA
More
|
|||||||
| Protein seq | GFFPFSSPGITGSRRYRRSPRHRPSSFASRLRIPSFQKADRFVGRSPEMEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNPGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEVFDAAFLFFEQNKFPMSWLSFGLCLT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr03 | 9023550 | 9023642 | - | OsAzu_03g0012280.01,OsAzu_03g0012280.02,OsAzu_03g0012280.05 | OsAzu_03g0012280.03,OsAzu_03g0012280.01,OsAzu_03g0012280.05,OsAzu_03g0012280.02 | All |
| RI | Chr03 | 9023537 | 9023729 | - | OsAzu_03g0012280.04 | OsAzu_03g0012280.01,OsAzu_03g0012280.04,OsAzu_03g0012280.05 | All |
| RI | Chr03 | 9023537 | 9023729 | - | OsAzu_03g0012280.04 | OsAzu_03g0012280.03,OsAzu_03g0012280.04 | All |
| RI | Chr03 | 9021619 | 9021892 | - | OsAzu_03g0012280.05 | OsAzu_03g0012280.03,OsAzu_03g0012280.04,OsAzu_03g0012280.02,OsAzu_03g0012280.01,OsAzu_03g0012280.05 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.987327 | 2.770998 | 9.213886 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0268100 | RBH | 1.863191 | 3.299580 | 4.152690 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g16120 | RBH | 1.139460 | 2.070731 | 0.971619 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0268100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0012110 | RBH | 0.271310 | 2.510860 | 3.537359 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0012130 | RBH | 1.326301 | 14.269515 | 8.897238 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0012080 | RBH | 0.017639 | 0.442867 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0011960 | RBH | 10.796139 | 1.816466 | 16.108459 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0150400 | RBH | 5.3292135 | 11.9536435 | 24.6678675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0011860 | RBH | 0.265680 | 1.306938 | 1.411816 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0151800 | RBH | 7.4919275 | 12.342806 | 15.7954365 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0011990 | RBH | 0.449252 | 0.042357 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0012060 | RBH | 1.521585 | 1.589186 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0012060 | RBH | 7.127318 | 19.021690 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0012000 | RBH | 1.031113 | 1.717305 | 1.343534 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0011940 | RBH | 0.310219 | 5.830701 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G011910 | RBH | 0.966715 | 7.029445 | 3.432235 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
