Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0015280 | OGI:02042770 | 10/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:15465309-15466730 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATGCTGTGAGCTCAGCTCCTACCACTACCTGAAAAATAAAATGCATAAGGGGTTTATACAAGACAAGTGTAAGCCATACAACAACCGATGATTCAGTAATTGATTGCTACATTATAACATATTACAAGCACCATACAAGACACAAGTTTAATTTTTGTGAAGGTTCAATCTAGTTGACAATCAGTGAATATTTGGAGTAGTCGGAAGAATTCGAAAGGAAGTAAAACAGTAAACTTAATGAGTGAAGCATTATCAACTTTAGATAGTGTCTATAATTAGACAAAAGAGTGCATACCTGACTGATCCCGAGTTAGTAGTGCTGCATTTTCATCGTACTTGATCTATAAAAAGTTAATAGGAGTTAGTAGTATATATGCAGATCACACATAGGTAAAAACACAAATAATTTAGCCTATACATTACATGAGTACGTGGCCAAGCAATTGATCGCCCGAAAGCATTTGCCATTGTTTGTATGCTCCCATATGGACGAGGAAGCACTACATCCCTTTTAATGACTGAGTTCACAACCACTTCATAGAATCTTGGACCAATAGCAGTTCCACCCACCAATGTGCCGGGGTTACTTGTTTGCACAGTAGCCTTCGCCACAGGAAGATTGTATGGAGCCACAAGATAAAGAAGTGTGACTTCTTGGCCACCCTACAACAATATAACACGGTTTTCACAAAAGTAGGACTACAATTTATTTATCAAACTAAAGCTGAAACATAGATATTAACATAAGGACTTTGTAAGAAATTATACCCCCATATTTCTTCTTTCTGGGACTGCAACTGTCTTACGTGGTAACTACACATTCATATAGTTAAGTGTCACCATTTTTTACTTAGTCCGACATAAAACACATAAAAACAATCTAGAACCAATAGCAAAGTGTTGCATACCTGCTGCCTGTAAGCATGGTTGCTAACTTCATGATCACTCACTTGTTGATCAACCTACAATGATGTGGCACAAGGTTTAGAGAAGAATATAACAAGTAATTTATTAGATCGAAACCAAAAACAGAAACATTGTAAAGTAGGACGAGTCTAAATTTATTAGGCTGGGGCCAAAACATAAACATTGACAGCAAGAATATCTAAGAAGTTATACCCCATCATGTCTTCCTTCGGGGATCGCAGCTCTCCTACGTGGTAACTACACATTTTTAAAGTTTGTCACTTTTTTCAGTAAGATCTATATGAAAAGATGAAAAATAAGCCAATAGCTAATGTTGCATACCTTCTGCCTGTAAGCGTGGCTGCTCAGTTCTTGGTCACTCACTTGTTGGTTGACCTACAACAATATAGCAGATTGTTTATAAAAGAATATTCAAAGTGAGAAAAGAGCACCGTTAGAGACTGTTGCTTACATGCTGCCTGTAGTCATGGTTTCTCACTTCGTGGTCATTCAT
More
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| CDS seq | ATGAATGACCACGAAGTGAGAAACCATGACTACAGGCAGCATGTCAACCAACAAGTGAGTGACCAAGAACTGAGCAGCCACGCTTACAGGCAGAAGGTTGATCAACAAGTGAGTGATCATGAAGTTAGCAACCATGCTTACAGGCAGCAGGTAGTGGTAGGAGCTGAGCTCACAGCATGA |
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| Protein seq | MNDHEVRNHDYRQHVNQQVSDQELSSHAYRQKVDQQVSDHEVSNHAYRQQVVVGAELTA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0015280 | OsIR64_02g0015280.01 | Chr02 | 15465309 | 15466730 | - | NAM | ||
| CDS seq | ATGAATGACCACGAAGTGAGAAACCATGACTACAGGCAGCATGTCAACCAACAAGTGAGTGACCAAGAACTGAGCAGCCACGCTTACAGGCAGAAGGTTGATCAACAAGTGAGTGATCATGAAGTTAGCAACCATGCTTACAGGCAGCAGGTAGTGGTAGGAGCTGAGCTCACAGCATGA |
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| Protein seq | MNDHEVRNHDYRQHVNQQVSDQELSSHAYRQKVDQQVSDHEVSNHAYRQQVVVGAELTA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0001300 | RBH | 29.250967 | 35.822304 | 15.774426 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0243500 | RBH | 0.0980605 | 0.42316 | 0.3404755 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0004170 | RBH | 0.084812 | 0.000000 | 0.711988 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0022170 | SBH | 0.257880 | 0.228424 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0015390 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0001360 | SBH | 14.673465 | 22.786509 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
