Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsGoSa_04g0027330 | OGI:04027370 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr04:34426145-34433012 | ||||||||
Gene Symbol | RLCK164, OsRLCK164, SDK14 | ||||||||||
DNA seq | atggcctgcctgagccacaacctcccagttctcatccacttgctactactaatctctttctgcagatgcgatgaccagttgagacatgcgaagcgactaatctctcctagcgacatgctcatctccaaaggtggagactttgcgctcggattcttctccccggccacctccaaccagagcttattccttggtatatggtatcacaatatctccgagcgcacctatgtttgggttgccaaccgcgacgacccgatcgctgcatcttcatccgcgacgctctccatcagcaacaattctgctcttgtattgtcagattccaaaggccgcaccctatggacgacgatggcaagtcccaacagtattgtcaccgaagacgacggagtttacgcggtgctgctcgactcaggaaatttggttcttcggctatcgaacaatacaaccatatggcaaagctttgatcaaccaactgataccattctgcccaacatgaagtttttagtgagatcctacggacaagtcgccatgcggttcatcgcttggaagggcccagatgacccatccaccggggatttctccttcagcggcgatcccacgtcaaactttcagatcttcatctggcacgagacaaggccatattaccgtttcattctgtttgatagtgtctcggtgtccggtgcaacatacttgcacaacagcacctcttttgtctatgaaacagtcgtgaacactaaggatgagttttacctcaagtacacaatctctgatgattcaccatacacgcgcgtcatgattgactacatgggcaactttaggttcatgagttggaacagcagcttgtcctcatggactgtcgcaaatcaactcccaagggcccctggctgcgatacctatggctcgtgtggcccattcggctactgcgacctcacgtcggccgtcccaagttgccaatgcctcgatgggtttgagcctgttggctccaattcttcttcaggatgccggagaaagcaacaattgagatgtggagatgaccattttgtgatcatgtctagaatgaaggttcctgacaagttcttgcatgtccagaacagaaacttcgacgagtgcacggacgagtgtacccgcaactgctcgtgcacggcctacgcctacaccaacttgaccgcaaccggcaccatgtccaaccagccaaggtgtttgctttggacaggggagcttgccgacgcgtggagtgtcacatcctgatttttgtttcaggatttataaatttatattaaatgttcataaatttacaagtgaagttaaatatgggaaataaaatttcttaaatgtaaagcatggatgaatttaatttttattaaattctccatggttaattatactctctggaattttctcggatttttcggagctcaattgttaattttaatcaaacaaagagaagttcagcaattatttaaatattaaattaatcattaaaaggtttaattataattgttaagtgcttttcttgtttaaaatccttaaattataaattgttgtttaaaaggaattattagaaatgattttttaaaagcttaaaagagaagttctaattttaatttgctaaatctcaatataaaattgagttagataaaattttattaaatactttgcttgttcctctattttctagaattttctgggaattatttgagcaagggaagtatttttaataaatgaaacatcatttcacgaattattttaattgaaaaagttttaaaaaccctcctttaagtcgttgggccgaattcggcccaactcttctctctcccgcccgcggccgagccggcccaaacggcccagccgacgccagcccgccctctcctcctcgggtcaccgacatgtgggacccacatgtcggatcctccttcaacctccggccggctgccctagccgagtccgaccgcgccgcgccgcttctcctctcaaatccgcctcaatccgatccgtttttcttcggatttttgaggggttttgatcctctcattctcctctttctttcccctcaagaaacggagcaatccattgagtatcttgcccgaatcaaattcgttttcgagtttatctccaaaaccgagttttgattttcttggatcgattcctctcgtttggagctcaaactcttcaatccaatgctataaatagcttcacctcgtcgctctctttcgtttgccctctctctcgtggtctcccatgccccctagccgccgcgccgcgtcgccctagccgccgccgtcgccggtcgtcgttcagccgcgccgcgccgcgcagccttctccgccgtcgccgccaccttttctcaccgccgttaggtgcgtgggagtgaagggaagctcggccgctcgttccccgttgtcgccggccaccggagctcgccgccgacgtccaacccgagccgccgccatcgtccttctcgtcgccggccgtcatccgtcgtcgttcgtcgctttggagagtaccatcgggttcgtctcgtcgtcctctacgcgtaggtgccctccttttccccggccaaggcccctagctccggcgaggttgtcgccttagccggccggccatggatgacgtcatgctgacgtcatcatccccttttcctttctttttcccttcttcttttaatagtttaaatcttctgaaaatcatatctaaataaccgtagatccgtttcaggtggttcaagttgctaaatttttctaaaataaagatctacatattaaaattgtccataaattgaattaatttatttaattctttttaaatgggctttaattagatttaatcttgtaaaattcataataaatttatttgaagtcagaatgaggccgttcaagtatcataattcatctaaaattatgatctacatgtttgtttactttttatgtactgtttatttggtttttattagtctttttcttcgttttgcgtgttagcttgtcgtttccgtcgttgcgaaggttcgtgagtgcgtcggaagtgatcaagaagattaattgaagaccgattattgcaaggcaagtcacacagatcctaaacacaatcctttgagcatgttgatcctatatttaaattctctatttatttcaactgtgcatttattttcgaatgtcaccgggtggtgtgaacctattcctttgttatggccaaattgcattgaatgccctattccttgataccttgggtaataaattgattagcttgaaccttatatattggattggttcagctaaatgctatatgtaagtttgcttagctatgcttagaaacattagctaactaatggggttaattataaactatgttaaattattattaattatggttacacttaatggtagctcacgatggttaatcgtgtgatgttaattaattgataaataaaacctggttaaggtgggttgtgagcatatggttttgatggttgtgctcatgacaattaaggaccggttcgcgagctactgttgtgaaacattaaccgtgccaaccacaagccagcgtgggcaacggctttatcttttgtatagcatgattcattatagtgtgccagactgtgaagtggcgagaagtccatgggggtcgctggggagtccatgcctctggttgtagagggggtgattatgatccaggaatggtgcactgtggtgagttgtgttatgcagggggtattgtcacagcctctattcgggtactttccagtatcgcgacgcatggtagacatgatgttgaggctgtgtcttgtgggtacagtggtacacctctggccagagtaaaaatattcgaatagccgtgctcgcggttatgggcgagttgagcaatgtttttcgtgattagtctcacatctctcacaataattatggatactataattggtaataatttgcttagctcctggtttggagttagatctgtacagccgggtatggttgttcaggatggttgggcctgtgcagcatgggtgtgttgttcagtgttgataaaaattctgattaattactccactgttttacttctcttaaatgttttgctaaatgctgctttcgcaaatgagcctatattatgccatcctttggaacctttgtgtacttgcatacttgctgtgtggcttgttgagtatgtcatatgctcattcttgcaataatcaatcaaacctCAGttgaagaaaaaggatccagaaggagaagacgtttggcttataccccagttgagctgcctgtgggagtggagctgaagccatcgctagaccgttaattccgctgctgttttcttttcttttgtaagtgtgtaacgttattattatgatggatttgtatattaaattgtcagtttgtgtacctcggctgattcctggacgaggattttatgcacaaataagttcggaaattactagtgaatttccgggcgtgacatggagggacatcagggacaccattgctgagaacctgtacctccggttggccgattctactggtatgcccaccctttttcccctgcgacgatagaatagctcttagattagcagtcctgaattttgttcacttatgttgataggacacacttcaaactcaacagaaagaaaaaagaatctagtgaaggtggtagtctaaatttagcatgcctgtttttgaacacgaccaccaggttactatctcccacaagcttgcaagctactgtatgtttgacgctgtaacttctgttcacccacattcttcacagggtcaaattctacagtaaacagaaagaagaagaggcacatggtggtaaatattgtactcccagctatagtgtgcctactaatactcacagcgtgcatatatcttgtcagtaaatgcaagtcaagaggtactataagcagtaggacctgcttaattgcaaagcgtgcatatatcttgtcagtaactgtaagtattgacattgttgattttactataaggcgtccgacaaaacaaggaaaaaacgaaaagacctgtcattcaacagttgagcactattcatgatttgtgggatcaaaatctggaatttccatgtattagctttgaagacatcactgctgcaacagacagtttccatgacaccaacatgcttggaaaaggaggttttggcaaagtatataaggtgatatataattttaccttgtcattctgtcaatgatatgaggaatagcgatgtcatttactcctattactttaataatgatgaaatcacacagggaacattggaggatggcaaggaaattgctgttaaaaggctcagcaagtgttctgagcaagggatggagcagttcagaaatgaactggttcttattgccaaactgcaacacaaaaacttagttagacttcttggttgctgtattcatggagatgagaagctgcttatttacgaatacttgcccaacaaaagcttagataaattccttttcagtatgttcgaccaatccaaagaaatactcttgcttggttaattatttgtttgattctactatcctaactgtgttctgggcagatcatacaacagaggctacacttgattggctgacaaggttcaacattatcaaaggggtagcaagaggacttctttatctccatcaagattcaagaatgaagataattcatagagatctcaaagcaagcaacatactgctcgatggagagatgaaccccaaaatatcggattttggtatggcgaggatatttggaggcaatgagcaacaagaaagtactagacgagttgttgggacatagtaagtaacttctgctcttgccaaccaaaattattcaaatacccaggttctggaaattattaaacttctttcttattcaaatagtggttacatgtcacctgaatatgcaatggaaggcaccttttcagtcaagtccgacacatatagctttggtattttgcttctagaaattgtaagtggattaaagatcagctcaCctcatcatcttgtgatggattttccaaaccttatagcttacgtaagtgttgccggtacccaatgcttcaaaatttaacaatcaaagaacaaacataacattgccagaacaaatattgaagttattctcttgtttcaggcatggaacttatggaaagatggaagacaaagggattttgtggacaaatcaattttggagagctgttccctcagcgaagtttttaaatgcatccatattggactcatgtgtgttcaggacagcccaaatgctaggccactgatgtcattcgttgtgTCtatgctggagaacgaggacatgccacacccaattccaacacaacctatataTtttgtgcagaggcattatgaatcagaagaaccaagagaatactcagataaatctgttaataatgtgagtctgactatactagaaggccgctgaataaatgttttagcataagctctaaacagatggatggttgtatagtacattagtacggaatacttcctccgtttcacaatgtaagtcattctagcatttttcatattcatatagatgttaatgaatctAaatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaGggagtagtaaacaatgaactgaaagatattggaaagaatgcattccgtaggtggttgtgcgcttgtgctacttgtttttttctcatctgctttgctctatcaatatattaggcagagctaatttatgttcAaaaaATTGAATAGATACTCCTCTAACAGAATAATGATTAGAGATCCACACAAGTGATCATTTGCCATGCGTCTTTTCTTTTGTGAAATATATTGAGCAGGTATTTGAAAGGTCATCTAA
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CDS seq | atggcctgcctgagccacaacctcccagttctcatccacttgctactactaatctctttctgcagatgcgatgaccagttgagacatgcgaagcgactaatctctcctagcgacatgctcatctccaaaggtggagactttgcgctcggattcttctccccggccacctccaaccagagcttattccttggtatatggtatcacaatatctccgagcgcacctatgtttgggttgccaaccgcgacgacccgatcgctgcatcttcatccgcgacgctctccatcagcaacaattctgctcttgtattgtcagattccaaaggccgcaccctatggacgacgatggcaagtcccaacagtattgtcaccgaagacgacggagtttacgcggtgctgctcgactcaggaaatttggttcttcggctatcgaacaatacaaccatatggcaaagctttgatcaaccaactgataccattctgcccaacatgaagtttttagtgagatcctacggacaagtcgccatgcggttcatcgcttggaagggcccagatgacccatccaccggggatttctccttcagcggcgatcccacgtcaaactttcagatcttcatctggcacgagacaaggccatattaccgtttcattctgtttgatagtgtctcggtgtccggtgcaacatacttgcacaacagcacctcttttgtctatgaaacagtcgtgaacactaaggatgagttttacctcaagtacacaatctctgatgattcaccatacacgcgcgtcatgattgactacatgggcaactttaggttcatgagttggaacagcagcttgtcctcatggactgtcgcaaatcaactcccaagggcccctggctgcgatacctatggctcgtgtggcccattcggctactgcgacctcacgtcggccgtcccaagttgccaatgcctcgatgggtttgagcctgttggctccaattcttcttcaggatgccggagaaagcaacaattgagatgtggagatgaccattttgtgatcatgtctagaatgaaggttcctgacaagttcttgcatgtccagaacagaaacttcgacgagtgcacggacgagtgtacccgcaactgctcgtgcacggcctacgcctacaccaacttgaccgcaaccggcaccatggtcaaattctacagtaaacagaaagaagaagaggcacatggtggcgtccgacaaaacaaggaaaaaacgaaaagacctgtcattcaacagttgagcactattcatgatttgtgggatcaaaatctggaatttccatgtattagctttgaagacatcactgctgcaacagacagtttccatgacaccaacatgcttggaaaaggaggttttggcaaagtatataagggaacattggaggatggcaaggaaattgctgttaaaaggctcagcaagtgttctgagcaagggatggagcagttcagaaatgaactggttcttattgccaaactgcaacacaaaaacttagttagacttcttggttgctgtattcatggagatgagaagctgcttatttacgaatacttgcccaacaaaagcttagataaattccttttcaatcatacaacagaggctacacttgattggctgacaaggttcaacattatcaaaggggtagcaagaggacttctttatctccatcaagattcaagaatgaagataattcatagagatctcaaagcaagcaacatactgctcgatggagagatgaaccccaaaatatcggattttggtatggcgaggatatttggaggcaatgagcaacaagaaagtactagacgagttgttgggacatatggttacatgtcacctgaatatgcaatggaaggcaccttttcagtcaagtccgacacatatagctttggtattttgcttctagaaattgtaagtggattaaagatcagctcaCctcatcatcttgtgatggattttccaaaccttatagcttacgcatggaacttatggaaagatggaagacaaagggattttgtggacaaatcaattttggagagctgttccctcagcgaagtttttaaatgcatccatattggactcatgtgtgttcaggacagcccaaatgctaggccactgatgtcattcgttgtgTCtatgctggagaacgaggacatgccacacccaattccaacacaacctatataTtttGTCATCTAA
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Protein seq | MACLSHNLPVLIHLLLLISFCRCDDQLRHAKRLISPSDMLISKGGDFALGFFSPATSNQSLFLGIWYHNISERTYVWVANRDDPIAASSSATLSISNNSALVLSDSKGRTLWTTMASPNSIVTEDDGVYAVLLDSGNLVLRLSNNTTIWQSFDQPTDTILPNMKFLVRSYGQVAMRFIAWKGPDDPSTGDFSFSGDPTSNFQIFIWHETRPYYRFILFDSVSVSGATYLHNSTSFVYETVVNTKDEFYLKYTISDDSPYTRVMIDYMGNFRFMSWNSSLSSWTVANQLPRAPGCDTYGSCGPFGYCDLTSAVPSCQCLDGFEPVGSNSSSGCRRKQQLRCGDDHFVIMSRMKVPDKFLHVQNRNFDECTDECTRNCSCTAYAYTNLTATGTMVKFYSKQKEEEAHGGVRQNKEKTKRPVIQQLSTIHDLWDQNLEFPCISFEDITAATDSFHDTNMLGKGGFGKVYKGTLEDGKEIAVKRLSKCSEQGMEQFRNELVLIAKLQHKNLVRLLGCCIHGDEKLLIYEYLPNKSLDKFLFNHTTEATLDWLTRFNIIKGVARGLLYLHQDSRMKIIHRDLKASNILLDGEMNPKISDFGMARIFGGNEQQESTRRVVGTYGYMSPEYAMEGTFSVKSDTYSFGILLLEIVSGLKISSPHHLVMDFPNLIAYAWNLWKDGRQRDFVDKSILESCSLSEVFKCIHIGLMCVQDSPNARPLMSFVVSMLENEDMPHPIPTQPIYFVI |
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Function | Putative serine/threonine-protein kinase receptor [UniProtKB/Swiss-Prot:Q09092] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsGoSa_04g0027330 | OsGoSa_04g0027330.01 | Chr04 | 34426145 | 34433012 | + | NAM | ||
CDS seq | atggcctgcctgagccacaacctcccagttctcatccacttgctactactaatctctttctgcagatgcgatgaccagttgagacatgcgaagcgactaatctctcctagcgacatgctcatctccaaaggtggagactttgcgctcggattcttctccccggccacctccaaccagagcttattccttggtatatggtatcacaatatctccgagcgcacctatgtttgggttgccaaccgcgacgacccgatcgctgcatcttcatccgcgacgctctccatcagcaacaattctgctcttgtattgtcagattccaaaggccgcaccctatggacgacgatggcaagtcccaacagtattgtcaccgaagacgacggagtttacgcggtgctgctcgactcaggaaatttggttcttcggctatcgaacaatacaaccatatggcaaagctttgatcaaccaactgataccattctgcccaacatgaagtttttagtgagatcctacggacaagtcgccatgcggttcatcgcttggaagggcccagatgacccatccaccggggatttctccttcagcggcgatcccacgtcaaactttcagatcttcatctggcacgagacaaggccatattaccgtttcattctgtttgatagtgtctcggtgtccggtgcaacatacttgcacaacagcacctcttttgtctatgaaacagtcgtgaacactaaggatgagttttacctcaagtacacaatctctgatgattcaccatacacgcgcgtcatgattgactacatgggcaactttaggttcatgagttggaacagcagcttgtcctcatggactgtcgcaaatcaactcccaagggcccctggctgcgatacctatggctcgtgtggcccattcggctactgcgacctcacgtcggccgtcccaagttgccaatgcctcgatgggtttgagcctgttggctccaattcttcttcaggatgccggagaaagcaacaattgagatgtggagatgaccattttgtgatcatgtctagaatgaaggttcctgacaagttcttgcatgtccagaacagaaacttcgacgagtgcacggacgagtgtacccgcaactgctcgtgcacggcctacgcctacaccaacttgaccgcaaccggcaccatggtcaaattctacagtaaacagaaagaagaagaggcacatggtggcgtccgacaaaacaaggaaaaaacgaaaagacctgtcattcaacagttgagcactattcatgatttgtgggatcaaaatctggaatttccatgtattagctttgaagacatcactgctgcaacagacagtttccatgacaccaacatgcttggaaaaggaggttttggcaaagtatataagggaacattggaggatggcaaggaaattgctgttaaaaggctcagcaagtgttctgagcaagggatggagcagttcagaaatgaactggttcttattgccaaactgcaacacaaaaacttagttagacttcttggttgctgtattcatggagatgagaagctgcttatttacgaatacttgcccaacaaaagcttagataaattccttttcaatcatacaacagaggctacacttgattggctgacaaggttcaacattatcaaaggggtagcaagaggacttctttatctccatcaagattcaagaatgaagataattcatagagatctcaaagcaagcaacatactgctcgatggagagatgaaccccaaaatatcggattttggtatggcgaggatatttggaggcaatgagcaacaagaaagtactagacgagttgttgggacatatggttacatgtcacctgaatatgcaatggaaggcaccttttcagtcaagtccgacacatatagctttggtattttgcttctagaaattgtaagtggattaaagatcagctcaCctcatcatcttgtgatggattttccaaaccttatagcttacgcatggaacttatggaaagatggaagacaaagggattttgtggacaaatcaattttggagagctgttccctcagcgaagtttttaaatgcatccatattggactcatgtgtgttcaggacagcccaaatgctaggccactgatgtcattcgttgtgTCtatgctggagaacgaggacatgccacacccaattccaacacaacctatataTtttGTCATCTAA
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Protein seq | MACLSHNLPVLIHLLLLISFCRCDDQLRHAKRLISPSDMLISKGGDFALGFFSPATSNQSLFLGIWYHNISERTYVWVANRDDPIAASSSATLSISNNSALVLSDSKGRTLWTTMASPNSIVTEDDGVYAVLLDSGNLVLRLSNNTTIWQSFDQPTDTILPNMKFLVRSYGQVAMRFIAWKGPDDPSTGDFSFSGDPTSNFQIFIWHETRPYYRFILFDSVSVSGATYLHNSTSFVYETVVNTKDEFYLKYTISDDSPYTRVMIDYMGNFRFMSWNSSLSSWTVANQLPRAPGCDTYGSCGPFGYCDLTSAVPSCQCLDGFEPVGSNSSSGCRRKQQLRCGDDHFVIMSRMKVPDKFLHVQNRNFDECTDECTRNCSCTAYAYTNLTATGTMVKFYSKQKEEEAHGGVRQNKEKTKRPVIQQLSTIHDLWDQNLEFPCISFEDITAATDSFHDTNMLGKGGFGKVYKGTLEDGKEIAVKRLSKCSEQGMEQFRNELVLIAKLQHKNLVRLLGCCIHGDEKLLIYEYLPNKSLDKFLFNHTTEATLDWLTRFNIIKGVARGLLYLHQDSRMKIIHRDLKASNILLDGEMNPKISDFGMARIFGGNEQQESTRRVVGTYGYMSPEYAMEGTFSVKSDTYSFGILLLEIVSGLKISSPHHLVMDFPNLIAYAWNLWKDGRQRDFVDKSILESCSLSEVFKCIHIGLMCVQDSPNARPLMSFVVSMLENEDMPHPIPTQPIYFVI
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.000000 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0633600 | RBH | 0.188416 | 0.343982 | 0.000000 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54110 | RBH | 0.122601 | 0.372555 | 0.000000 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0633600 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027890 | RBH | 0.000000 | 0.0 | 0.836688 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028560 | SBH | 0.047108 | 0.229314 | 0.848784 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028230 | SBH | 0.369437 | 0.739790 | 2.057186 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028030 | SBH | 0.031282 | 0.013722 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028290 | RBH | 28.615248 | 3.884939 | 5.803555 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0508000 | RBH | 0.2074425 | 0.4359805 | 0.457304 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026980 | SBH | 0.129210 | 0.011754 | 0.285752 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0510900 | RBH | 3.4301045 | 2.6218555 | 4.6655365 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027440 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027200 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004940 | RBH | 0.602334 | 3.834400 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027820 | SBH | 0.128691 | 0.086759 | 0.434129 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027880 | SBH | 0.0 | 0.604004 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G027290 | RBH | 0.343259 | 0.0 | 0.378354 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0027190 | RBH | 0.000000 | 0.0 | 0.181934 |