Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_08g0004940 | OGI:08011680 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr08:4279653-4287228 | ||||||||
| Gene Symbol | SDRLP-1, MAK10 | ||||||||||
| DNA seq | atgaatcaatcgtccgcgacgctgtcactgaccgaccagggcgagatagttgcgtctgattcattaggtggcactctatggaagatgaacagcagcaagaacattgctggtggaggtactagatcatccgcgacggtgttgcttaacacggggaacctggtcatccggtcattcgatggaaccatcatgtgggagaactttgatcgcccaactgacactttcctacctggcatgaaaatctggttgctccgtgatgatcatattgccgttgagccctttcatttcttggaagagccccgatgacccttccaatggtgacttctcccttggtagtggcttgaagccataccctcagctctttgtgcggcatggatttaatccctgttggcgtggatcaggctcaacgtggaatggacctttactcaaaaagctttttgttgtatttggctcctatcagggataagaattactcatacctgatgatctctacatcgtacagttcaacaagtgtgcgctttgtactggacagctccggcaaagtgcagtttctgagctgggactctggtcactcactgtgggcagtacagtacatcttatctgttcaaggttgcggtcgctatggctcatgtggcccatatggtcattgcgacttgacaggcgtccatacatgcaagtgccttgatggatttgaacctgtctccggtaactcctcacaaggctgtcgagaaaggaggagctgcgatgtggtgatcatgagcatttcttgctgttgcctggcatgaaattgccagataagttcgtgtacatcagtggtataagctttgaggagtgcacagtgttatgcagtaggaactgttcgtgcacagcttatgcttacaccaattcaacaagtttacttccaccccagtgcttgctatggatgggagagcttattgacacagcaaagcttggtgaaaatggtgagaatttatatctccggcttgccagtccagttgtaggtaggataaaatgtagttggtgtgtgaaatttgtattggatgttctcctctaccttgatgttggtcacttcgggcatatcactaaatggcctgcaggaagagagaaaaaaaggcatgatcaagttgtttattctgaaaccatggtctgttctcatgaagacatacaaaagaaactatgtggatattacttattaattaacaTttgtgtcctcttgactttaattcgaacccccacaagcaattgccagaggatggaaattggaataatatatttttcatggtaaatgtttattatgttaataaataaaaattcttgatgtttaaattttctcatagtagatattttgaaatccttttaaaaaaatattttgaaatcctgattctcaccaggaattaatttcggaaagagcaaatggaggataatggaaatagtactgcctgttgtgtcaagcttgctgatgctcttatgtctatggcttgtatggatctgcaactgcaaaggtgaagcggagtttttagttatattctgatccgcttatccTttttttttctctccatgttgtctaactgcagttgcattagccacttcactttttaacagtcatgtactcatgttgtccttgtgaattcacaagttttttttaaggcattgcaaactattcttatcaggcaaacaagaaaactaggagatttcaaaaagacaaatgcaaagagcTttgagtgtttcagaaggacttgggggaaacaaaggtagaatttcctgttataagctttagagaaattactgttgcaacccaataTtttgctgattccaatattctcgggcgaggaggttttggcaatttttacaaggtaatgataattcttatattggtagaaagtttgtaggatatacttgctctattaacttatgcccattttatttgtttaaatgatatgcaacttggcagggaacattggaaggtggtactgagattgcagtgaaaaggctaagcaagagttctggccaaggattagaggagttcagaatgaagtgattctaattgccaagttgcaacacagaaacctagttaagcttcttggttgctgtactcgcggagaagaaaaaatattgatttatgaatacttgcccaacaaaagcttagatgccttccgtttcagtatgttctggtgattatgatggcaaagatagatcagacgataaggtctcctctaaaataaactcctgtaaaaaagttatagagattctaaagaacttttattaaagcaaaccacccactttgttacctacttactgcttaatttctttaaacttacgtaatcatctccttttggaatgcacaaaattcttttcaataaataattagttaagtaacatgcatggctgattatgttttttttattgatttctatccttggtagatgatgcaagaaaattctcaaacgcagatgcaagaaaatcaatgcttgattggccaacaaggtttaagacaataaagggagtagccaaaggacttctttatctccaccaagattcaagattaacagtagttcacagggatctcaaagctagcaacaaattgctggatgctgacatgagccccaaggtatcagattttggcatggcaatgatttttggtagtgcccaacaacaagcaaatactaaccgattagttggaacatagtgagtaatttcatacgtaaattgtacttaagtttaataatcttcactgaaaactaaatcaattgtgtttctttctgggaaatgattcatcaaacagtggttacatgtcacctgaatatgcattggaaggcacttgttcggtgaagtccgatattagcttcggtgtgttacttttgaaaattgtttctggcttaaagatcagccatccacgccgaatcacagactttctcaatctcatagctttcgtaagttctgtaaaatgctcaaagtctcaaaatttattttaacttttgtgcaattaggctttgtttggcaaatgggattgggaaataatatctcaccctctaaagggcaatattgcatcctaaccatccattcttcacacctcatttaatcctagccattcatccatttccattttctaatcccacctcccatatcccatttgccaaacacacccttaagaattatatccttttttttatttattcaggcatggagttcatggaaagatcagaacacaaaggatttagtcgactcgtcaatctcagggagttgctcacttgatgaaatttcacggtgtatccatctggggcttttgtgtgttcaggacaacccaaattctcgaccaatagagaacttacgtcagcagtataatatcaattgttctttttttttgcggggataatatcaattgttcatattctagttttctaacctttttctgaacttgctaaaatataaatatgtcaattgttcccagcttagcaccgaagatggatctgaacctggatggctttcgcatgggtaagttgctttgctgtaaaataaaccagatgtttagcctattaaatattataaatttaatatgctattaaatgaaacctgtcttgttctcatttcctacaagttgcctagtagaaacttgttagtttatctgaattggattctacttaacacacacaagtttttatctcttcatatacctttagttccatcatgtgaatatgtagtagagaaggaaatctggaaattattgactaggaatgatgattaaatgaaccttaccacctgaaacctggaaattattgactacgaaacctgaatctttttaactttcagagaaaatacgttaagacctttCcccccagatatttccctaattccgtggtattaaaaaactttaagtgacctacaaggctacaaggaataacttgtcttctttctggtgtgaattttttgcttgaaatgatttttctttttgcatttaacttaaaattgaggggatgagtagagcattcagaatatcacatcatgattagtatcatttccagaaaacagttgacaataggagccagtaccaattttagaacagcttaacttcccttttgttccttggttctggcttttaaggcaacttgaccctttaattgcttctatatcccattagcatccatggttgcataacccatttcattacaagcagggcaccaagaatgccaatgtgttcccttcatgcctctaccatgatttttcttctttattggatattcagttcaattcatctctgtgcatccgacaaccgccttgtccctggtaagccgctctctcctggtagcaccattatctctgatgatggaacatttgccctGggttttttctccccatccaaccccaagaaacactattatgttggcatatggtacaataacatccccaagttcaccgttgtgtgggtagcgaaccgtgctgcgccaatcactgttccttcatctgcagtgttcaccttgaccaggagctccaacctcaccttgtctgatggcaatggccatgtcctttggacgacaatggccaaaagcagaatcagcatcagctccccccgaaacaccaaaaacatctcaacagaagccatgctagacaacaccggaaacctcattctccggtcattggctgacaatgccatcatatggcagagcttcgaccacccgaccgacactctcctgcctggcatgaacctcaggctcagccacaatacacacccactgcagcgcctcatttcttggaaagacatacgagacccatcccctggtcccttctcctacggtgcagaccccaacaacctgcttcagcgcttcatctggcatggctcggtgccgcaccggcgaagccctgtgtggaacaactacctcctcattggtaaatacatgaacaacctcaattccacgatttacatggcgataaaccatgacagcgatgaggtgtacatgtcctttggcatgccaactggccccttcagtgtgctgatcaggatgaaaataacctacctaggcaaggtaaatatgttaggttggcagagcaacatctcagcatggacaaccctgtactcggagcctgtgcatgactgcaatatctacggctattgcggtcccaacagttactgcgacaacacagatgctgtcccagcatgcaagtgccttgatgggtttgagccaagggaggaggaaaggcggaccaacaacagaagctttttgctgggatgccgccgcaggaaggccctaagatgtcaccatgggaacagtttcttgacttatccgagcatgaaggtccctgacaacttcatctacattcacaaaagaagctttgacgagtgcatggtggaatgcaggagcaactgctcctgtgtggcatatgcttactccaacattagcagcgggattattgatgacacgaggtgcctattgtggacgggggagctcatcgacatggagaaggttacccaaggaggggagaacctctatattcgagctaacagattaaacggtatgagttcttgcttctcttcatctgctaactgcttaccttcatacagacatttttcaattcttccgagccctagtgagaggggccttttgatagtggggaaagaggaatcaatatggccgtcttttttaaacaattagacgAaaaaaatcagagaggtagtatgaacattaattactctaccttatatgtgttgtgtgagatggatggttctctatgaatcgtatacaggtaacaggaaaacaaccgatatcctagaatttgtactaccagctgtggcaagtttgctgatactgatatgcatgcttatttggatctgcggcgttcgaggtacatacgaataagtgttgtcattttgatttgtccctaactccaaacaaattagtggcacctacattcctttcaggtaaacaaaggggcgatgagatctacggtggactgatgctgggagatattagcacctcccgtgagctctctgatagaaaagtagattttccaatttttagcttcagagaaattgcttccgcgacaaataatttctctgattccaacatacttggtcatggaggatttggcactgtttacaaggtaatgaggccggcacagattaatctcagcactagaaatttaatggaatttataactcgtttggtttgagatttattcaatttttcagggaacaatggatggtgataaggaaattgctgtcaaaaggctcggtaaaggttctgcacaaggtgtagtggaattcaaaaacgaagtacttctgattgccaagttgcaacacagaaacttagttaaacttcttggttgctgcattcatggagatgaaaaactattagtttatgaatatctacctaacaaaagcttggatgccttccttttcagtatgttctggccacctattgcaaatgcccaatttttagtggaatgaatgtgggtgtattgataatgcacatgtgattctatcattgacagatgcttcaagaaattcagcgcttgactggacaacaaggttcaagataataaaaggtgttgctcgaggcattctttatctccaccaggactcaagactgacaataattcatagagatcttaaagcaagcaatgtattgttggatgctgatatgcaccccaagatatctgattttggtacagccaggatctttggtgggaacgaacaacaatcaaataccaacagagtggttggaacatagtgagtacctccacacttcagatatatatattttttctttctacttcgagatttaagttgtgtgtgccccgtgtggtgaattgtcaatgtagtggctacatggcgcctgaatatgcactggaaggcataatatctgtcaaatcagacgtctatagcttcggtgtgctactcctggagattgtgagtggcttgaagatcagcggaatcatagacccaaccacgggccattccaacctcatagcctatgtaagtggtttgaagtattcaaaacttaactaacgattcacccttaatatgggatgatcaactgatttaggcatggagcttatggaagaacgggaacatgagtacttttgttgatgcctcgatctcggagagttcttcactcaatgaagctctaagatgcatccatatagcgctcttgtcgatacAaaacaacccgaatgctcggccgctcatgtcgtgggtggtttcgagcttggataacaaagacatcgagctcccagagcccaaagagcctatgtactttgcacacaggagttatggagctgatggagcaggcgaaagctttgtgaatgacatgagcattgcatcggtggaagcgcgctagaaattatctaaactatatatgtatagtagctttggtaaggtatttcattttcatatctattgaaccaagtggtagctcaaaaacagtgagagagagcaaatatttgtggtgagcaaagagtagctccgtatctgtctgaatggcatcttggcctgattagctctgatatgttcattgactcattgtattgtatctgtaccccaagtgctcatatcaagaaagcttaggcgaaacctttctctgtcagg
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| CDS seq | atgaatcaatcgtccgcgacgctgtcactgaccgaccagggcgagatagttgcgtctgattcattaggtggcactctatggaagatgaacagcagcaagaacattgctggtggaggtactagatcatccgcgacggtgttgcttaacacggggaacctggtcatccggtcattcgatggaaccatcatgtgggagaactttgatcgcccaactgacactttcctacctggcatgaaaatctgggataagaattactcatacctgatgatctctacatcgtacagttcaacaagtgtgcgctttgtactggacagctccggcaaagtgcagtttctgagctgggactctggtcactcactgtgggcagtacagtacatcttatctgttcaaggttgcggtcgctatggctcatgtggcccatatggtcattgcgacttgacaggcgtccatacatgcaagtgccttgatggatttgaacctgtctccgataagttcgtgtacatcagtggtataagctttgaggagtgcacagtgttatgcagtaggaactgttcgtgcacagcttatgcttacaccaattcaacaagtttacttccaccccagtgcttgctatggatgggagagcttattgacacagcaaagcttggtgaaaatggaattaatttcggaaagagcaaatggaggataatggaaatagtactgcctgttgtgtcaagcttgctgatgctcttatgtctatggcttgtatggatctgcaactgcaaagatgatgcaagaaaattctcaaacgcagatgcaagaaaatcaatgcttgattggccaacaaggtttaagacaataaagggagtagccaaaggacttctttatctccaccaagattcaagattaacagtagttcacagggatctcaaagctagcaacaaattgctggatgctgacatgagccccaaggtatcagattttggcatggcaatgatttttggtagtgcccaacaacaagcaaatactaaccgattagttggaacatatggttacatgtcacctgaatatgcattggaaggcacttgttcggtgaagtccgatattagcttcggtgtgttacttttgaaaattgtttctggcttaaagatcagccatccacgccgaatcacagactttctcaatctcatagctttcttttctaacctttttctgaacttgctaaaatataaatatgtcaattgttcccagcttagcaccgaagatggatctgaacctggatggctttcgcatggttcaattcatctctgtgcatccgacaaccgccttgtccctggtaagccgctctctcctggtagcaccattatctctgatgatggaacatttgccctGggttttttctccccatccaaccccaagaaacactattatgttggcatatggtacaataacatccccaagttcaccgttgtgtgggtagcgaaccgtgctgcgccaatcactgttccttcatctgcagtgttcaccttgaccaggagctccaacctcaccttgtctgatggcaatggccatgtcctttggacgacaatggccaaaagcagaatcagcatcagctccccccgaaacaccaaaaacatctcaacagaagccatgctagacaacaccggaaacctcattctccggtcattggctgacaatgccatcatatggcagagcttcgaccacccgaccgacactctcctgcctggcatgaacctcaggctcagccacaatacacacccactgcagcgcctcatttcttggaaagacatacgagacccatcccctggtcccttctcctacggtgcagaccccaacaacctgcttcagcgcttcatctggcatggctcggtgccgcaccggcgaagccctgtgtggaacaactacctcctcattggtaaatacatgaacaacctcaattccacgatttacatggcgataaaccatgacagcgatgaggtgtacatgtcctttggcatgccaactggccccttcagtgtgctgatcaggatgaaaataacctacctaggcaaggtaaatatgttaggttggcagagcaacatctcagcatggacaaccctgtactcggagcctgtgcatgactgcaatatctacggctattgcggtcccaacagttactgcgacaacacagatgctgtcccagcatgcaagtgccttgatgggtttgagccaagggaggaggaaaggcggaccaacaacagaagctttttgctgggatgccgccgcaggaaggccctaagatgtcaccatgggaacagtttcttgacttatccgagcatgaaggtccctgacaacttcatctacattcacaaaagaagctttgacgagtgcatggtggaatgcaggagcaactgctcctgtgtggcatatgcttactccaacattagcagcgggattattgatgacacgaggtgcctattgtggacgggggagctcatcgacatggagaaggttacccaaggaggggagaacctctatattcgagctaacagattaaacggtaacaggaaaacaaccgatatcctagaatttgtactaccagctgtggcaagtttgctgatactgatatgcatgcttatttggatctgcggcgttcgaggtaaacaaaggggcgatgagatctacggtggactgatgctgggagatattagcacctcccgtgagctctctgatagaaaagtagattttccaatttttagcttcagagaaattgcttccgcgacaaataatttctctgattccaacatacttggtcatggaggatttggcactgtttacaagggaacaatggatggtgataaggaaattgctgtcaaaaggctcggtaaaggttctgcacaaggtgtagtggaattcaaaaacgaagtacttctgattgccaagttgcaacacagaaacttagttaaacttcttggttgctgcattcatggagatgaaaaactattagtttatgaatatctacctaacaaaagcttggatgccttccttttcaatgcttcaagaaattcagcgcttgactggacaacaaggttcaagataataaaaggtgttgctcgaggcattctttatctccaccaggactcaagactgacaataattcatagagatcttaaagcaagcaatgtattgttggatgctgatatgcaccccaagatatctgattttggtacagccaggatctttggtgggaacgaacaacaatcaaataccaacagagtggttggaacatatggctacatggcgcctgaatatgcactggaaggcataatatctgtcaaatcagacgtctatagcttcggtgtgctactcctggagattgtgagtggcttgaagatcagcggaatcatagacccaaccacgggccattccaacctcatagcctatgcatggagcttatggaagaacgggaacatgagtacttttgttgatgcctcgatctcggagagttcttcactcaatgaagctctaagatgcatccatatagcgctcttgtcgatacAaaacaacccgaatgctcggccgctcatgtcgtgggtggtttcgagcttggataacaaagacatcgagctcccagagcccaaagagcctatgtactttgcacacaggagttatggagctgatggagcaggcgaaagctttgtgaatgacatgagcattgcatcggtggaagcgcgctag
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| Protein seq | MNQSSATLSLTDQGEIVASDSLGGTLWKMNSSKNIAGGGTRSSATVLLNTGNLVIRSFDGTIMWENFDRPTDTFLPGMKIWDKNYSYLMISTSYSSTSVRFVLDSSGKVQFLSWDSGHSLWAVQYILSVQGCGRYGSCGPYGHCDLTGVHTCKCLDGFEPVSDKFVYISGISFEECTVLCSRNCSCTAYAYTNSTSLLPPQCLLWMGELIDTAKLGENGINFGKSKWRIMEIVLPVVSSLLMLLCLWLVWICNCKDDARKFSNADARKSMLDWPTRFKTIKGVAKGLLYLHQDSRLTVVHRDLKASNKLLDADMSPKVSDFGMAMIFGSAQQQANTNRLVGTYGYMSPEYALEGTCSVKSDISFGVLLLKIVSGLKISHPRRITDFLNLIAFFSNLFLNLLKYKYVNCSQLSTEDGSEPGWLSHGSIHLCASDNRLVPGKPLSPGSTIISDDGTFALGFFSPSNPKKHYYVGIWYNNIPKFTVVWVANRAAPITVPSSAVFTLTRSSNLTLSDGNGHVLWTTMAKSRISISSPRNTKNISTEAMLDNTGNLILRSLADNAIIWQSFDHPTDTLLPGMNLRLSHNTHPLQRLISWKDIRDPSPGPFSYGADPNNLLQRFIWHGSVPHRRSPVWNNYLLIGKYMNNLNSTIYMAINHDSDEVYMSFGMPTGPFSVLIRMKITYLGKVNMLGWQSNISAWTTLYSEPVHDCNIYGYCGPNSYCDNTDAVPACKCLDGFEPREEERRTNNRSFLLGCRRRKALRCHHGNSFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGELIDMEKVTQGGENLYIRANRLNGNRKTTDILEFVLPAVASLLILICMLIWICGVRGKQRGDEIYGGLMLGDISTSRELSDRKVDFPIFSFREIASATNNFSDSNILGHGGFGTVYKGTMDGDKEIAVKRLGKGSAQGVVEFKNEVLLIAKLQHRNLVKLLGCCIHGDEKLLVYEYLPNKSLDAFLFNASRNSALDWTTRFKIIKGVARGILYLHQDSRLTIIHRDLKASNVLLDADMHPKISDFGTARIFGGNEQQSNTNRVVGTYGYMAPEYALEGIISVKSDVYSFGVLLLEIVSGLKISGIIDPTTGHSNLIAYAWSLWKNGNMSTFVDASISESSSLNEALRCIHIALLSIQNNPNARPLMSWVVSSLDNKDIELPEPKEPMYFAHRSYGADGAGESFVNDMSIASVEAR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [UniProtKB/Swiss-Prot:O81906] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_08g0004940 | OsGoSa_08g0004940.02 | Chr08 | 4279653 | 4287174 | + | NAM | ||
| CDS seq | atgaatcaatcgtccgcgacgctgtcactgaccgaccagggcgagatagttgcgtctgattcattaggtggcactctatggaagatgaacagcagcaagaacattgctggtggaggtactagatcatccgcgacggtgttgcttaacacggggaacctggtcatccggtcattcgatggaaccatcatgtgggagaactttgatcgcccaactgacactttcctacctggcatgaaaatctgggataagaattactcatacctgatgatctctacatcgtacagttcaacaagtgtgcgctttgtactggacagctccggcaaagtgcagtttctgagctgggactctggtcactcactgtgggcagtacagtacatcttatctgttcaaggttgcggtcgctatggctcatgtggcccatatggtcattgcgacttgacaggcgtccatacatgcaagtgccttgatggatttgaacctgtctccgataagttcgtgtacatcagtggtataagctttgaggagtgcacagtgttatgcagtaggaactgttcgtgcacagcttatgcttacaccaattcaacaagtttacttccaccccagtgcttgctatggatgggagagcttattgacacagcaaagcttggtgaaaatggaattaatttcggaaagagcaaatggaggataatggaaatagtactgcctgttgtgtcaagcttgctgatgctcttatgtctatggcttgtatggatctgcaactgcaaagatgatgcaagaaaattctcaaacgcagatgcaagaaaatcaatgcttgattggccaacaaggtttaagacaataaagggagtagccaaaggacttctttatctccaccaagattcaagattaacagtagttcacagggatctcaaagctagcaacaaattgctggatgctgacatgagccccaaggtatcagattttggcatggcaatgatttttggtagtgcccaacaacaagcaaatactaaccgattagttggaacatatggttacatgtcacctgaatatgcattggaaggcacttgttcggtgaagtccgatattagcttcggtgtgttacttttgaaaattgtttctggcttaaagatcagccatccacgccgaatcacagactttctcaatctcatagctttcttttctaacctttttctgaacttgctaaaatataaatatgtcaattgttcccagcttagcaccgaagatggatctgaacctggatggctttcgcatggttcaattcatctctgtgcatccgacaaccgccttgtccctggtaagccgctctctcctggtagcaccattatctctgatgatggaacatttgccctGggttttttctccccatccaaccccaagaaacactattatgttggcatatggtacaataacatccccaagttcaccgttgtgtgggtagcgaaccgtgctgcgccaatcactgttccttcatctgcagtgttcaccttgaccaggagctccaacctcaccttgtctgatggcaatggccatgtcctttggacgacaatggccaaaagcagaatcagcatcagctccccccgaaacaccaaaaacatctcaacagaagccatgctagacaacaccggaaacctcattctccggtcattggctgacaatgccatcatatggcagagcttcgaccacccgaccgacactctcctgcctggcatgaacctcaggctcagccacaatacacacccactgcagcgcctcatttcttggaaagacatacgagacccatcccctggtcccttctcctacggtgcagaccccaacaacctgcttcagcgcttcatctggcatggctcggtgccgcaccggcgaagccctgtgtggaacaactacctcctcattggtaaatacatgaacaacctcaattccacgatttacatggcgataaaccatgacagcgatgaggtgtacatgtcctttggcatgccaactggccccttcagtgtgctgatcaggatgaaaataacctacctaggcaaggtaaatatgttaggttggcagagcaacatctcagcatggacaaccctgtactcggagcctgtgcatgactgcaatatctacggctattgcggtcccaacagttactgcgacaacacagatgctgtcccagcatgcaagtgccttgatgggtttgagccaagggaggaggaaaggcggaccaacaacagaagctttttgctgggatgccgccgcaggaaggccctaagatgtcaccatgggaacagtttcttgacttatccgagcatgaaggtccctgacaacttcatctacattcacaaaagaagctttgacgagtgcatggtggaatgcaggagcaactgctcctgtgtggcatatgcttactccaacattagcagcgggattattgatgacacgaggtgcctattgtggacgggggagctcatcgacatggagaaggttacccaaggaggggagaacctctatattcgagctaacagattaaacggtaacaggaaaacaaccgatatcctagaatttgtactaccagctgtggcaagtttgctgatactgatatgcatgcttatttggatctgcggcgttcgaggtaaacaaaggggcgatgagatctacggtggactgatgctgggagatattagcacctcccgtgagctctctgatagaaaagtagattttccaatttttagcttcagagaaattgcttccgcgacaaataatttctctgattccaacatacttggtcatggaggatttggcactgtttacaagggaacaatggatggtgataaggaaattgctgtcaaaaggctcggtaaaggttctgcacaaggtgtagtggaattcaaaaacgaagtacttctgattgccaagttgcaacacagaaacttagttaaacttcttggttgctgcattcatggagatgaaaaactattagtttatgaatatctacctaacaaaagcttggatgccttccttttcaatgcttcaagaaattcagcgcttgactggacaacaaggttcaagataataaaaggtgttgctcgaggcattctttatctccaccaggactcaagactgacaataattcatagagatcttaaagcaagcaatgtattgttggatgctgatatgcaccccaagatatctgattttggtacagccaggatctttggtgggaacgaacaacaatcaaataccaacagagtggttggaacatatggctacatggcgcctgaatatgcactggaaggcataatatctgtcaaatcagacgtctatagcttcggtgtgctactcctggagattgtgagtggcttgaagatcagcggaatcatagacccaaccacgggccattccaacctcatagcctatgcatggagcttatggaagaacgggaacatgagtacttttgttgatgcctcgatctcggagagttcttcactcaatgaagctctaagatgcatccatatagcgctcttgtcgatacAaaacaacccgaatgctcggccgctcatgtcgtgggtggtttcgagcttggataacaaagacatcgagctcccagagcccaaagagcctatgtactttgcacacaggagttatggagctgatggagcaggcgaaagctttgtgaatgacatgagcattgcatcggtggaagcgcgctag
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| Protein seq | MNQSSATLSLTDQGEIVASDSLGGTLWKMNSSKNIAGGGTRSSATVLLNTGNLVIRSFDGTIMWENFDRPTDTFLPGMKIWDKNYSYLMISTSYSSTSVRFVLDSSGKVQFLSWDSGHSLWAVQYILSVQGCGRYGSCGPYGHCDLTGVHTCKCLDGFEPVSDKFVYISGISFEECTVLCSRNCSCTAYAYTNSTSLLPPQCLLWMGELIDTAKLGENGINFGKSKWRIMEIVLPVVSSLLMLLCLWLVWICNCKDDARKFSNADARKSMLDWPTRFKTIKGVAKGLLYLHQDSRLTVVHRDLKASNKLLDADMSPKVSDFGMAMIFGSAQQQANTNRLVGTYGYMSPEYALEGTCSVKSDISFGVLLLKIVSGLKISHPRRITDFLNLIAFFSNLFLNLLKYKYVNCSQLSTEDGSEPGWLSHGSIHLCASDNRLVPGKPLSPGSTIISDDGTFALGFFSPSNPKKHYYVGIWYNNIPKFTVVWVANRAAPITVPSSAVFTLTRSSNLTLSDGNGHVLWTTMAKSRISISSPRNTKNISTEAMLDNTGNLILRSLADNAIIWQSFDHPTDTLLPGMNLRLSHNTHPLQRLISWKDIRDPSPGPFSYGADPNNLLQRFIWHGSVPHRRSPVWNNYLLIGKYMNNLNSTIYMAINHDSDEVYMSFGMPTGPFSVLIRMKITYLGKVNMLGWQSNISAWTTLYSEPVHDCNIYGYCGPNSYCDNTDAVPACKCLDGFEPREEERRTNNRSFLLGCRRRKALRCHHGNSFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGELIDMEKVTQGGENLYIRANRLNGNRKTTDILEFVLPAVASLLILICMLIWICGVRGKQRGDEIYGGLMLGDISTSRELSDRKVDFPIFSFREIASATNNFSDSNILGHGGFGTVYKGTMDGDKEIAVKRLGKGSAQGVVEFKNEVLLIAKLQHRNLVKLLGCCIHGDEKLLVYEYLPNKSLDAFLFNASRNSALDWTTRFKIIKGVARGILYLHQDSRLTIIHRDLKASNVLLDADMHPKISDFGTARIFGGNEQQSNTNRVVGTYGYMAPEYALEGIISVKSDVYSFGVLLLEIVSGLKISGIIDPTTGHSNLIAYAWSLWKNGNMSTFVDASISESSSLNEALRCIHIALLSIQNNPNARPLMSWVVSSLDNKDIELPEPKEPMYFAHRSYGADGAGESFVNDMSIASVEAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_08g0004940 | OsGoSa_08g0004940.01 | Chr08 | 4279653 | 4287228 | + | NAM | ||
| CDS seq | atgaatcaatcgtccgcgacgctgtcactgaccgaccagggcgagatagttgcgtctgattcattaggtggcactctatggaagatgaacagcagcaagaacattgctggtggaggtactagatcatccgcgacggtgttgcttaacacggggaacctggtcatccggtcattcgatggaaccatcatgtgggagaactttgatcgcccaactgacactttcctacctggcatgaaaatctgggataagaattactcatacctgatgatctctacatcgtacagttcaacaagtgtgcgctttgtactggacagctccggcaaagtgcagtttctgagctgggactctggtcactcactgtgggcagtacagtacatcttatctgttcaaggttgcggtcgctatggctcatgtggcccatatggtcattgcgacttgacaggcgtccatacatgcaagtgccttgatggatttgaacctgtctccgataagttcgtgtacatcagtggtataagctttgaggagtgcacagtgttatgcagtaggaactgttcgtgcacagcttatgcttacaccaattcaacaagtttacttccaccccagtgcttgctatggatgggagagcttattgacacagcaaagcttggtgaaaatgatgatgcaagaaaattctcaaacgcagatgcaagaaaatcaatgcttgattggccaacaaggtttaagacaataaagggagtagccaaaggacttctttatctccaccaagattcaagattaacagtagttcacagggatctcaaagctagcaacaaattgctggatgctgacatgagccccaaggtatcagattttggcatggcaatgatttttggtagtgcccaacaacaagcaaatactaaccgattagttggaacatatggttacatgtcacctgaatatgcattggaaggcacttgttcggtgaagtccgatattagcttcggtgtgttacttttgaaaattgtttctggcttaaagatcagccatccacgccgaatcacagactttctcaatctcatagctttccttagcaccgaagatggatctgaacctggatggctttcgcatggttcaattcatctctgtgcatccgacaaccgccttgtccctggtaagccgctctctcctggtagcaccattatctctgatgatggaacatttgccctGggttttttctccccatccaaccccaagaaacactattatgttggcatatggtacaataacatccccaagttcaccgttgtgtgggtagcgaaccgtgctgcgccaatcactgttccttcatctgcagtgttcaccttgaccaggagctccaacctcaccttgtctgatggcaatggccatgtcctttggacgacaatggccaaaagcagaatcagcatcagctccccccgaaacaccaaaaacatctcaacagaagccatgctagacaacaccggaaacctcattctccggtcattggctgacaatgccatcatatggcagagcttcgaccacccgaccgacactctcctgcctggcatgaacctcaggctcagccacaatacacacccactgcagcgcctcatttcttggaaagacatacgagacccatcccctggtcccttctcctacggtgcagaccccaacaacctgcttcagcgcttcatctggcatggctcggtgccgcaccggcgaagccctgtgtggaacaactacctcctcattggtaaatacatgaacaacctcaattccacgatttacatggcgataaaccatgacagcgatgaggtgtacatgtcctttggcatgccaactggccccttcagtgtgctgatcaggatgaaaataacctacctaggcaaggtaaatatgttaggttggcagagcaacatctcagcatggacaaccctgtactcggagcctgtgcatgactgcaatatctacggctattgcggtcccaacagttactgcgacaacacagatgctgtcccagcatgcaagtgccttgatgggtttgagccaagggaggaggaaaggcggaccaacaacagaagctttttgctgggatgccgccgcaggaaggccctaagatgtcaccatgggaacagtttcttgacttatccgagcatgaaggtccctgacaacttcatctacattcacaaaagaagctttgacgagtgcatggtggaatgcaggagcaactgctcctgtgtggcatatgcttactccaacattagcagcgggattattgatgacacgaggtgcctattgtggacgggggagctcatcgacatggagaaggttacccaaggaggggagaacctctatattcgagctaacagattaaacggtaacaggaaaacaaccgatatcctagaatttgtactaccagctgtggcaagtttgctgatactgatatgcatgcttatttggatctgcggcgttcgaggtaaacaaaggggcgatgagatctacggtggactgatgctgggagatattagcacctcccgtgagctctctgatagaaaagtagattttccaatttttagcttcagagaaattgcttccgcgacaaataatttctctgattccaacatacttggtcatggaggatttggcactgtttacaagggaacaatggatggtgataaggaaattgctgtcaaaaggctcggtaaaggttctgcacaagatgcttcaagaaattcagcgcttgactggacaacaaggttcaagataataaaaggtgttgctcgaggcattctttatctccaccaggactcaagactgacaataattcatagagatcttaaagcaagcaatgtattgttggatgctgatatgcaccccaagatatctgattttggtacagccaggatctttggtgggaacgaacaacaatcaaataccaacagagtggttggaacatatggctacatggcgcctgaatatgcactggaaggcataatatctgtcaaatcagacgtctatagcttcggtgtgctactcctggagattgtgagtggcttgaagatcagcggaatcatagacccaaccacgggccattccaacctcatagcctatgcatggagcttatggaagaacgggaacatgagtacttttgttgatgcctcgatctcggagagttcttcactcaatgaagctctaagatgcatccatatagcgctcttgtcgatacAaaacaacccgaatgctcggccgctcatgtcgtgggtggtttcgagcttggataacaaagacatcgagctcccagagcccaaagagcctatgtactttgcacacaggagttatggagctgatggagcaggcgaaagctttgtgaatgacatgagcattgcatcggtggaagcgcgctag
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| Protein seq | MNQSSATLSLTDQGEIVASDSLGGTLWKMNSSKNIAGGGTRSSATVLLNTGNLVIRSFDGTIMWENFDRPTDTFLPGMKIWDKNYSYLMISTSYSSTSVRFVLDSSGKVQFLSWDSGHSLWAVQYILSVQGCGRYGSCGPYGHCDLTGVHTCKCLDGFEPVSDKFVYISGISFEECTVLCSRNCSCTAYAYTNSTSLLPPQCLLWMGELIDTAKLGENDDARKFSNADARKSMLDWPTRFKTIKGVAKGLLYLHQDSRLTVVHRDLKASNKLLDADMSPKVSDFGMAMIFGSAQQQANTNRLVGTYGYMSPEYALEGTCSVKSDISFGVLLLKIVSGLKISHPRRITDFLNLIAFLSTEDGSEPGWLSHGSIHLCASDNRLVPGKPLSPGSTIISDDGTFALGFFSPSNPKKHYYVGIWYNNIPKFTVVWVANRAAPITVPSSAVFTLTRSSNLTLSDGNGHVLWTTMAKSRISISSPRNTKNISTEAMLDNTGNLILRSLADNAIIWQSFDHPTDTLLPGMNLRLSHNTHPLQRLISWKDIRDPSPGPFSYGADPNNLLQRFIWHGSVPHRRSPVWNNYLLIGKYMNNLNSTIYMAINHDSDEVYMSFGMPTGPFSVLIRMKITYLGKVNMLGWQSNISAWTTLYSEPVHDCNIYGYCGPNSYCDNTDAVPACKCLDGFEPREEERRTNNRSFLLGCRRRKALRCHHGNSFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGELIDMEKVTQGGENLYIRANRLNGNRKTTDILEFVLPAVASLLILICMLIWICGVRGKQRGDEIYGGLMLGDISTSRELSDRKVDFPIFSFREIASATNNFSDSNILGHGGFGTVYKGTMDGDKEIAVKRLGKGSAQDASRNSALDWTTRFKIIKGVARGILYLHQDSRLTIIHRDLKASNVLLDADMHPKISDFGTARIFGGNEQQSNTNRVVGTYGYMAPEYALEGIISVKSDVYSFGVLLLEIVSGLKISGIIDPTTGHSNLIAYAWSLWKNGNMSTFVDASISESSSLNEALRCIHIALLSIQNNPNARPLMSWVVSSLDNKDIELPEPKEPMYFAHRSYGADGAGESFVNDMSIASVEAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr08 | 4282579 | 4283098 | + | OsGoSa_08g0004940.02 | OsGoSa_08g0004940.01,OsGoSa_08g0004940.02 | All |
| SE | Chr08 | 4280611 | 4282073 | + | OsGoSa_08g0004940.02 | OsGoSa_08g0004940.01,OsGoSa_08g0004940.02 | All |
| A5 | Chr08 | 4285891 | 4286133 | + | OsGoSa_08g0004940.02 | OsGoSa_08g0004940.01,OsGoSa_08g0004940.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.602334 | 3.834400 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0179000 | RBH | 0.433721 | 0.119548 | 1.624010 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g08140 | RBH | 0.000000 | 0.101814 | 0.677814 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0179000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0005390 | RBH | 0.000000 | 0.564771 | 2.993837 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0005400 | RBH | 0.000000 | 0.271223 | 1.215260 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005450 | RBH | 0.000000 | 0.000000 | 5.715254 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0005420 | RBH | 0.000000 | 0.014877 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0005120 | RBH | 0.0 | 3.997302 | 5.362953 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0068800 | RBH | 0.9645235 | 1.238768 | 1.660416 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0004960 | RBH | 0.0 | 0.000000 | 0.780818 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0074700 | RBH | 1.277417 | 1.272955 | 4.670356 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0005080 | RBH | 0.000000 | 0.062137 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0005150 | RBH | 0.046002 | 3.218636 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027330 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0005220 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0005130 | RBH | 0.032409 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G005070 | RBH | 0.000000 | 0.447898 | 0.500868 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005040 | RBH | 0.000000 | 1.020672 | 6.215721 |
