Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_12g0015310 | OGI:03082670 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr12:20254014-20259920 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aacaaatgcagtggagaatatatatttcaatccgtggagtaaataatccatttcaacaatcccaccatgaataatatgaaaactaacagggtcttatatcttcttgcttgaattccaaataacatagtactgctctttatagagagccaactaaacaactccattctaatttcatggaatggaaacaaccaaaacaactggtagatagatagatagatagatagatagatagataaactgataatttcacccactctgttgcatcgcctgttgttcgtgtgctcccttgttgggcttacgatgatagattgcaggtgatactgaatgaccataattacatgacgagtaagacgcctgcaacaccaagttagtttttattaaatctactattgaatatatttttatcgtattttactttgctttggaaatgttgttatttgatcaaacttgaataagtttgatttaggaaaaaacccttcatcgatttgtagtgtgaaaaggagtacaaggtaaaaaaaaaagtctcaattgaatgattatttgtgccgtacagataaaaaaaaccatgcaaatatctaaccatgcaaatatgcagaaatttggctagttggaaattaacttggagtgacccacgcatataagcattatttagagatgcacttgatactgcagtggtaagaggtgtatggtttcaaccctgagatcacgtgttcaatccctaacatactcgtaatttcttgaaaaaaaaactttggatggatgtttctccctccaaatcttgtttttttttaatataagcattatttacaatgagatgtcagattacgtaacatagttgacacttgactgcaatggcataaaagaaatcatctcaatataacaattctcttacgtaacgatatagggggaggggaaaaaaggaatgtataactaggagtaagaagttgattgcacgctgatatgctaacgttcataaagagttttttggttttttttaagataatgaataacctggcagctgcatcaaagacgtacataggccatcatgcattactgtgcaccaagcaaagacagaaaaaattaacgttcataaagatacatcatacgagtattaaacgttgagtgggaggcttggtggacctagcattatataatggctagtacatgaaaaaaaaggttgttgattaggggaagaaatcagcttagtacctgagttagttcatcatcatcgattgtattttgagcgctgcttgattaggatagtccttaagtgcctcttcaataacagccttgctgtcatcatcaaaggaataaatggttgcatgccgaagggagtagagattctccaaacctaaatcatttaagccacccctccttagtctggtccaaatagaaagataaagcctttcaaggtggggcatagctcctggttgaaacgatggcatcatggggctataaaactgaaaatcttttaaactccgaaatgcacatgcacctctgtggatagtgagcttttcctgtagttgttccaaaacaaatgctaactgtagcctgagaaagcgaagagatggaagctcagcgaggcgatcaaggtggtcagactggagatattcgaaatccagacaaatggataaggtggtgaggtgggagagcatcaatgaattgatccaacatgggaatgctttcataaacgaatcgggcatgaacaacctttggagaccggaaggaacctgttgcatgtctatgatttcttcaaaactaatattatttctcaaatctaggtcttgcaaattggtgagcctttgtatagacgtttgaatggattcctttaactcaaatgttttttcactaccgaaaacgatcctaagagtccttagctctgtcaaattaccaatctcttttattacctttcgggtagcttctattacaagctcctgtaaagatttcatattccccagcatcagaccttgcgccagcttcactctgccagcatatagccgcaacagtttccttagtttggcaaaagacattggaaacagtaccttatgagatttaaaagaacttggtttacgtgcacctcttatgtccaaggtttcgagagattccagtttcccaatgctttcagggagctcagtggcactatagtgccctagacgcagaaatcttaggaggcgtagcttatcgagatgattaagatggttcttgtccattccactgcagtcctcaagctgcaacacacgcaggacatgaaagctcgacaagggtggtatcgagtcgaccttgccgaagatagtaatggaccttactttggacaattgttctcttgcttctggtgaggcataggatttattgctgttatggagagataatcggcgaatcttcttcttttgtgctgtacatgtatgtttacctgtttgttgaccatctgataaatacgttgtaacaaaatcttcttctactgacagctgatttattagctcaagcaccatgtcatgtactttgcatgcatgcaccttaccatcttcatcccaaaaaacatgcaccttaccatcttcatcccaaaaattgtcctcactcatcggctggatcaagcttcgattgatgagctcgttgaagtagctctctccaatctcctgcaagcttgtccctacaggtcgtgtttcatctgtaataaaaccctcagctaaccaaccccatatcaaaacatcttttctaattagttcatcctcaggatatttgcttagagacaacaagcaagtcttcaaatgaaaaggtagatcgttgtaactgaggcttaatatcttccgcatcttgtccacatcaaggttgttctcaagccccaaactgatagacttattgaccttgtcccattcctctgaattccttggtttgctagcaagtaggcatgctgtagtgatgattgctagcggtacaccaccacatttcttcaaaattttctcagtgacaccacacaaatcagcaggacagtcatcgttagagtcaaatattcgtttgcagaacaattgtctggaatcatcatcagataagggtttcatttcataaacaccactgcctgcatgttctgcaacgaccttgtttcgcgtggttacaattattttgctaccaagtttagcatcttgcacagcaagtttgatagtatcccacgctgattttttccatacatcatcaatcacgcacaagaacctaaagatggtagcatatacacatgttattgaacctagatataaatcatgtgaagcctgtccaaaaaagataggaatatgtatcttgcacattgaatatcgaaaatgatgtgcagctttaaatgtgtaattttccaacaattttgacacaataagtgcagctttgtgaatttctattcacaaagttacaaagatacttaattatgcgtaaatagggcagatttctgaataactatgtgttccattggaaaaccaaaactttatttacaagccagttatattataatagtataaaaacttgagctaggattcccggttatattagaatacaataaaaacttgagccaggactcttattcgtacaacaaaaggtatcttcaaataatgataaaaggtaggtataacatagaaatgtaccttctattgttgaggaagtctctaattttgtcgatgagctgcttcgtttcccatgtttcatctatgtgggaatacattttctcatcaagttggagaagaatgttcttgagaatcttgtttatatcaggattcaaggacaccgaaacaaaacaatagctgtcaaattttgccttaagctcctgaaataatgaattggcaagagttgtctttcctaagcctccgaatccaacaatagaaattatatttgattgttggctggatgagccgtcatattccaagagttgcttagttagctcattttttggcttgctaatgccaatgagttctgtcgcctttcggtacatagcttctaggcgagaatcaacatccacaacagttggcctggcagcattgtcgtcgactatgtacctatcacgacgttcgctgaccttcttgacctggtccatgatgtctttcatgacaccgtggatctgatggttggttttgaacttgttgaacaaattggtgaccttcttgaagctcgtggcaggttcatgccccttgcactttaacatgaaggtgtcgatggcatcctcgatgtcgtaagatagctctctcacctcgctggcccagatcttgacctgctggtcaagttgatccacaggtgtctcagccaccttgtggagtgctgcggtcatacctttcaactctttctcaagttcttcgatctctcccttgacacccttttgcagcttgtattcgccaaccagcagctccccaagcttggggaggagggtgttcattgcccctgtggcgatgttcatcttggcctatctgatgttgaatgcctgcacgggtacacacagatgcacttaaatgagcctcttgagtttattagtatgtatcaggattcaggaatgatcaagcaaccgcaaaaacatggagaaaaacgacatctgaataattaagctgctatgtagcatgtcaaatcgagactagattgaggtaacaaccgtgtgctgcatcacctaatcgatccaagcaaagctcatcaccgtgagcagcgcaagatagcgacctctcaacgctgtacggtatactagtaacaggaaggaccaagcaacgacgcccaaacacacatggagaaaatcagcatctggatcaaccgggccgtaccggaatcggaggtcgatcgggacagtggatgcggtcgcgccgtcgctggctccgctccgctccgccccgcccttgctgcgccgcgaatcgggtccgccgccactcagccacgtcgcccgcgatcgatcgatgccgtggtggaagcggccggcggcgagagtaggggagctcgggtcaacgggtgggagacctggagtcaagcttgctccagccgaagaggatagaataatgagaggataaccaacggactccgcttcagtgacttagctaaggcaagtcacagcgtgacataccatgtatctcggccgtccaaaacgaatccaatggagatggcgcttggtcccgcacgcaggcaaaaaaaaatctccgtttcggcctaacaggaagcccgcacgcgcacaggacgcgcttaacctcgccctcgtccgcgtacaccggcgcagcctgagacggactcaacttcgcctcgccctcaggtccgcgtacgccggcgcttcatctcgccctcgtccggccgccgccgcgagtcagctgggaggcgcgtcgctgcgaccggagaggcaccaggctgccctgccctgccgccgcgaccgggggcgcgtggaggcggccggccgccgggcctgacggcgcggtggtgcaggcgggcagccgcgcagcccgagcccggcgcgtggaggaggccgcgctgctcctgccgcgccacacgtcccgatttcggcggcctcaactccacgatggatttcagcgtccgagcccgcatccagagcccgcaccagtcggccgcccacttcgtcgccggcgagaggtgacaccgccgcccggcttcgtccaaggtaggagtcactggtggttgagtttgtggagaacgacgcaccttttcctgtgcccgcgaggtgtttgtggaaatgacctgccgtctgggatgatgcagagtcctgattgaaagtgaattgttattgtttggctttgtgagattagaagcaaattgattctgtaatctttgattgagattgatttggttgtatgactcatatatgctgtaatttgaatgaatgaatgaataaatcagtaacttctgacgatgttttctaaaaaattttgagatgtttgagatgttgcccaggtccat
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| CDS seq | atggacctgggcaacatctcaaacatctcaaaattttttagaaaacatcgtcagaagttactgatttattcattcattcattcaaattacagcatatatgagtcatacaaccaaatcaatctcaatcaaagattacagaatcaatttgcttctaatctcacaaagccaaacaataacaattcactttcaatcaggactctgcatcatcccagacggcaggtcatttccacaaacacctcgcgggcacaggaaaaggtgcgtcgttctccacaaactcaaccaccagtgactcctaccttggacgaagccgggcggcggtgtcacctctcgccggcgacgaagtgggcggccgactggtgcgggctctggatgcgggctcggacgctgaaatccatcgtggagttgaggccgccgaaatcgggacgtgtggcgcggcaggagcagcgcggcctcctccacgcgccgggctcgggctgcgcggctgcccgcctgcaccaccgcgccgtcaggcccggcggccggccgcctccacgcgcccccggtcgcggcggcagggcagggcagcctggtgcctctccggtcgcagcgacgcgcctcccagctgactcgcggcggcggccggacgagggcgagatgaagcgccggcgggcaatgaacaccctcctccccaagcttggggagctgctggttggcgaatacaagctgcaaaagggtgtcaagggagagatcgaagaacttgagaaagagttgaaaggtatgaccgcagcactccacaaggtggctgagacacctgtggatcaacttgaccagcaggtcaagatctgggccagcgaggtgagagagctatcttacgacatcgaggatgccatcgacaccttcatgttaaagtgcaaggggcatgaacctgccacgagcttcaagaaggtcaccaatttgttcaacaagttcaaaaccaaccatcagatccacggtgtcatgaaagacatcatggaccaggtcaagaaggtcagcgaacgtcgtgataggtacatagtcgacgacaatgctgccaggccaactgttgtggatgttgattctcgcctagaagctatgtaccgaaaggcgacagaactcattggcattagcaagccaaaaaatgagctaactaagcaactcttggaatatgacggctcatccagccaacaatcaaatataatttctattgttggattcggaggcttaggaaagacaactcttgccaattcattatttcaggagcttaaggcaaaatttgacagctattgttttgtttcggtgtccttgaatcctgatataaacaagattctcaagaacattcttctccaacttgatgagaaaatgtattcccacatagatgaaacatgggaaacgaagcagctcatcgacaaaattagagacttcctcaacaatagaaggttcttgtgcgtgattgatgatgtatggaaaaaatcagcgtgggatactatcaaacttgctgtgcaagatgctaaacttggtagcaaaataattgtaaccacgcgaaacaaggtcgttgcagaacatgcaggcagtggtgtttatgaaatgaaacccttatctgatgatgattccagacaattgttctgcaaacgaatatttgactctaacgatgactgtcctgctgatttgtgtggtgtcactgagaaaattttgaagaaatgtggtggtgtaccgctagcaatcatcactacagcatgcctacttgctagcaaaccaaggaattcagaggaatgggacaaggtcaataagtctatcagtttggggcttgagaacaaccttgatgtggacaagatgcggaagatattaagcctcagttacaacgatctaccttttcatttgaagacttgcttgttgtctctaagcaaatatcctgaggatgaactaattagaaaagatgttttgatatggggttggttagctgagggttttattacagatgaaacacgacctgtagggacaagcttgcaggagattggagagagctacttcaacgagctcatcaatcgaagcttgatccagccgatgagtgaggacaatttttgggatgaagatggtaaggtgcatgttttttgggatgaagatggtaaggtgcatgcatgcaaagtacatgacatggtgcttgagctaataaatcagctgtcagtagaagaagattttgttacaacgtatttatcagatggtcaacaaacaggtaaacatacatgtacagcacaaaagaagaagattcgccgattatctctccataacagcaataaatcctatgcctcaccagaagcaagagaacaattgtccaaagtaaggtccattactatcttcggcaaggtcgactcgataccacccttgtcgagctttcatgtcctgcgtgtgttgcagcttgaggactgcagtggaatggacaagaaccatcttaatcatctcgataagctacgcctcctaagatttctgcgtctagggcactatagtgccactgagctccctgaaagcattgggaaactggaatctctcgaaaccttggacataagaggtgcacgtaaaccaagttcttttaaatctcataaggtactgtttccaatgtcttttgccaaactaaggaaactgttgcggctatatgctggcagagtgaagctggcgcaaggtctgatgctggggaatatgaaatctttacaggagcttgtaatagaagctacccgaaaggtaataaaagagattggtaatttgacagagctaaggactcttaggatcgttttcggtagtgaaaaaacatttgagttaaaggaatccattcaaacgtctatacaaaggctcaccaatttgcaagacctagatttgagaaataatattagttttgaagaaatcatagacatgcaacaggttccttccggtctccaaaggttgttcatgcccgattcgtttatgaaagcattcccatgttggatcaattcattgatgctctcccacctcaccaccttatccatttgtctggatttcgaatatctccagtctgaccaccttgatcgcctcgctgagcttccatctcttcgctttctcaggctacagttagcatttgttttggaacaactacaggaaaagctcactatccacagaggtgcatgtgcatttcggagtttaaaagattttcagttttatagccccatgatgccatcgtttcaaccaggagctatgccccaccttgaaaggctttatctttctatttggaccagactaaggaggggtggcttaaatgatttaggtttggagaatctctactcccttcggcatgcaaccatttattcctttgatgatgacagcaaggctgttattgaagaggcacttaaggactatcctaatcaagcagcgctcaaaatacaatcgatgatgatgaactaa
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| Protein seq | MDLGNISNISKFFRKHRQKLLIYSFIHSNYSIYESYNQINLNQRLQNQFASNLTKPNNNNSLSIRTLHHPRRQVISTNTSRAQEKVRRSPQTQPPVTPTLDEAGRRCHLSPATKWAADWCGLWMRARTLKSIVELRPPKSGRVARQEQRGLLHAPGSGCAAARLHHRAVRPGGRPPPRAPGRGGRAGQPGASPVAATRLPADSRRRPDEGEMKRRRAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTAALHKVAETPVDQLDQQVKIWASEVRELSYDIEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVMKDIMDQVKKVSERRDRYIVDDNAARPTVVDVDSRLEAMYRKATELIGISKPKNELTKQLLEYDGSSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYCFVSVSLNPDINKILKNILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIVTTRNKVVAEHAGSGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPRNSEEWDKVNKSISLGLENNLDVDKMRKILSLSYNDLPFHLKTCLLSLSKYPEDELIRKDVLIWGWLAEGFITDETRPVGTSLQEIGESYFNELINRSLIQPMSEDNFWDEDGKVHVFWDEDGKVHACKVHDMVLELINQLSVEEDFVTTYLSDGQQTGKHTCTAQKKKIRRLSLHNSNKSYASPEAREQLSKVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGMDKNHLNHLDKLRLLRFLRLGHYSATELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLRLYAGRVKLAQGLMLGNMKSLQELVIEATRKVIKEIGNLTELRTLRIVFGSEKTFELKESIQTSIQRLTNLQDLDLRNNISFEEIIDMQQVPSGLQRLFMPDSFMKAFPCWINSLMLSHLTTLSICLDFEYLQSDHLDRLAELPSLRFLRLQLAFVLEQLQEKLTIHRGACAFRSLKDFQFYSPMMPSFQPGAMPHLERLYLSIWTRLRRGGLNDLGLENLYSLRHATIYSFDDDSKAVIEEALKDYPNQAALKIQSMMMN |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0015310 | OsCMeo_12g0015310.01 | Chr12 | 20255228 | 20259920 | - | NAM | ||
| CDS seq | atggacctgggcaacatctcaaacatctcaaaattttttagaaaacatcgtcagaagttactgatttattcattcattcattcaaattacagcatatatgagtcatacaaccaaatcaatctcaatcaaagattacagaatcaatttgcttctaatctcacaaagccaaacaataacaattcactttcaatcaggactctgcatcatcccagacggcaggtcatttccacaaacacctcgcgggcacaggaaaaggtgcgtcgttctccacaaactcaaccaccagtgactcctaccttggacgaagccgggcggcggtgtcacctctcgccggcgacgaagtgggcggccgactggtgcgggctctggatgcgggctcggacgctgaaatccatcgtggagttgaggccgccgaaatcgggacgtgtggcgcggcaggagcagcgcggcctcctccacgcgccgggctcgggctgcgcggctgcccgcctgcaccaccgcgccgtcaggcccggcggccggccgcctccacgcgcccccggtcgcggcggcagggcagggcagcctggtgcctctccggtcgcagcgacgcgcctcccagctgactcgcggcggcggccggacgagggcgagatgaagcgccggcgggcaatgaacaccctcctccccaagcttggggagctgctggttggcgaatacaagctgcaaaagggtgtcaagggagagatcgaagaacttgagaaagagttgaaaggtatgaccgcagcactccacaaggtggctgagacacctgtggatcaacttgaccagcaggtcaagatctgggccagcgaggtgagagagctatcttacgacatcgaggatgccatcgacaccttcatgttaaagtgcaaggggcatgaacctgccacgagcttcaagaaggtcaccaatttgttcaacaagttcaaaaccaaccatcagatccacggtgtcatgaaagacatcatggaccaggtcaagaaggtcagcgaacgtcgtgataggtacatagtcgacgacaatgctgccaggccaactgttgtggatgttgattctcgcctagaagctatgtaccgaaaggcgacagaactcattggcattagcaagccaaaaaatgagctaactaagcaactcttggaatatgacggctcatccagccaacaatcaaatataatttctattgttggattcggaggcttaggaaagacaactcttgccaattcattatttcaggagcttaaggcaaaatttgacagctattgttttgtttcggtgtccttgaatcctgatataaacaagattctcaagaacattcttctccaacttgatgagaaaatgtattcccacatagatgaaacatgggaaacgaagcagctcatcgacaaaattagagacttcctcaacaatagaaggttcttgtgcgtgattgatgatgtatggaaaaaatcagcgtgggatactatcaaacttgctgtgcaagatgctaaacttggtagcaaaataattgtaaccacgcgaaacaaggtcgttgcagaacatgcaggcagtggtgtttatgaaatgaaacccttatctgatgatgattccagacaattgttctgcaaacgaatatttgactctaacgatgactgtcctgctgatttgtgtggtgtcactgagaaaattttgaagaaatgtggtggtgtaccgctagcaatcatcactacagcatgcctacttgctagcaaaccaaggaattcagaggaatgggacaaggtcaataagtctatcagtttggggcttgagaacaaccttgatgtggacaagatgcggaagatattaagcctcagttacaacgatctaccttttcatttgaagacttgcttgttgtctctaagcaaatatcctgaggatgaactaattagaaaagatgttttgatatggggttggttagctgagggttttattacagatgaaacacgacctgtagggacaagcttgcaggagattggagagagctacttcaacgagctcatcaatcgaagcttgatccagccgatgagtgaggacaatttttgggatgaagatggtaaggtgcatgttttttgggatgaagatggtaaggtgcatgcatgcaaagtacatgacatggtgcttgagctaataaatcagctgtcagtagaagaagattttgttacaacgtatttatcagatggtcaacaaacaggtaaacatacatgtacagcacaaaagaagaagattcgccgattatctctccataacagcaataaatcctatgcctcaccagaagcaagagaacaattgtccaaagtaaggtccattactatcttcggcaaggtcgactcgataccacccttgtcgagctttcatgtcctgcgtgtgttgcagcttgaggactgcagtggaatggacaagaaccatcttaatcatctcgataagctacgcctcctaagatttctgcgtctagggcactatagtgccactgagctccctgaaagcattgggaaactggaatctctcgaaaccttggacataagaggtgcacgtaaaccaagttcttttaaatctcataaggtactgtttccaatgtcttttgccaaactaaggaaactgttgcggctatatgctggcagagtgaagctggcgcaaggtctgatgctggggaatatgaaatctttacaggagcttgtaatagaagctacccgaaaggtaataaaagagattggtaatttgacagagctaaggactcttaggatcgttttcggtagtgaaaaaacatttgagttaaaggaatccattcaaacgtctatacaaaggctcaccaatttgcaagacctagatttgagaaataatattagttttgaagaaatcatagacatgcaacaggttccttccggtctccaaaggttgttcatgcccgattcgtttatgaaagcattcccatgttggatcaattcattgatgctctcccacctcaccaccttatccatttgtctggatttcgaatatctccagtctgaccaccttgatcgcctcgctgagcttccatctcttcgctttctcaggctacagttagcatttgttttggaacaactacaggaaaagctcactatccacagaggtgcatgtgcatttcggagtttaaaagattttcagttttatagccccatgatgccatcgtttcaaccaggagctatgccccaccttgaaaggctttatctttctatttggaccagactaaggaggggtggcttaaatgatttaggtttggagaatctctactcccttcggcatgcaaccatttattcctttgatgatgacagcaaggctgttattgaagaggcacttaaggactatcctaatcaagcagcgctcaaaatacaatcgatgatgatgaactaa
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| Protein seq | MDLGNISNISKFFRKHRQKLLIYSFIHSNYSIYESYNQINLNQRLQNQFASNLTKPNNNNSLSIRTLHHPRRQVISTNTSRAQEKVRRSPQTQPPVTPTLDEAGRRCHLSPATKWAADWCGLWMRARTLKSIVELRPPKSGRVARQEQRGLLHAPGSGCAAARLHHRAVRPGGRPPPRAPGRGGRAGQPGASPVAATRLPADSRRRPDEGEMKRRRAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTAALHKVAETPVDQLDQQVKIWASEVRELSYDIEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVMKDIMDQVKKVSERRDRYIVDDNAARPTVVDVDSRLEAMYRKATELIGISKPKNELTKQLLEYDGSSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYCFVSVSLNPDINKILKNILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIVTTRNKVVAEHAGSGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPRNSEEWDKVNKSISLGLENNLDVDKMRKILSLSYNDLPFHLKTCLLSLSKYPEDELIRKDVLIWGWLAEGFITDETRPVGTSLQEIGESYFNELINRSLIQPMSEDNFWDEDGKVHVFWDEDGKVHACKVHDMVLELINQLSVEEDFVTTYLSDGQQTGKHTCTAQKKKIRRLSLHNSNKSYASPEAREQLSKVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGMDKNHLNHLDKLRLLRFLRLGHYSATELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLRLYAGRVKLAQGLMLGNMKSLQELVIEATRKVIKEIGNLTELRTLRIVFGSEKTFELKESIQTSIQRLTNLQDLDLRNNISFEEIIDMQQVPSGLQRLFMPDSFMKAFPCWINSLMLSHLTTLSICLDFEYLQSDHLDRLAELPSLRFLRLQLAFVLEQLQEKLTIHRGACAFRSLKDFQFYSPMMPSFQPGAMPHLERLYLSIWTRLRRGGLNDLGLENLYSLRHATIYSFDDDSKAVIEEALKDYPNQAALKIQSMMMN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0015310 | OsCMeo_12g0015310.02 | Chr12 | 20254014 | 20259029 | - | IsoSeq | ||
| CDS seq | atggtcaacaaacaggtaaacatacatgtacagcacaaaagaagaagattcgccgattatctctccataacagcaataaatcctatgcctcaccagaagcaagagaacaattgtcca |
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| Protein seq | MVNKQVNIHVQHKRRRFADYLSITAINPMPHQKQENNCP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.879800 | 8.909056 | 12.071543 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0516350 | RBH | 0.819384 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g33165 | RBH | 0.507228 | 0.0 | 0.151574 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0516350 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0008950 | SBH | 0.197351 | 8.965397 | 6.821876 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0009070 | SBH | 0.000000 | 4.725021 | 1.666354 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0015320 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0008980 | SBH | 0.0 | 0.206512 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0014640 | RBH | 15.126895 | 4.928723 | 13.624816 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0234500 | SBH | 0 | 0 | 0.333826 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006100 | SBH | 0.0 | 0.088325 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0300700 | RBH | 10.2455155 | 11.7344715 | 12.761187 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0008750 | SBH | 0.000000 | 0.213022 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0006250 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006110 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0027390 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0009100 | SBH | 0.088794 | 0.569195 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G026920 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0002440 | RBH | 0.0 | 0.0 | 0.0 |
