Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0027930 | OGI:04093890 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:31826348-31838874 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggcagagtcggtggccatccgcggtgcacagtgggttgtgagcaaggcgctgagcccgctgtccgatggcttggtagaggcgtgggcggccagctcggcgctcggccccaacatcgaagctctcaagacagagcttctctacgcacaggccatgctcgacaatgcccgtggcagggagatccgaagccatgctctggtggagttgctgcagaagctacggcggctagcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacgagctcgaaggcaccttcgagaccgtcgaccgtgggtgcttccacgacctcgtccgtgatgcacgccacacaaccaaggctgctgccaagcagctcgagtgcacctcctgcttctcttcttcgtccatgccagaacatggtggcgcaagaaggcgggtgctgtgtggcgcttggctgtgctgcggcgccgatgagaaacaatcctgcaagtgcgcgtgccagctcgtcaaccgtgctagcagcactgtccgcgctgtcggtaaacgactctcttctcttctaccaatacatgatgatggtaaaacaccaaagatggattttgatagagtggatgcctctagaagaatgaggcgcatagtagaacaactacaacccatatgtgctaaagtatctaccattcttgatctagagttgttaggctctgccattgccaaattggagttcatgggctctaggcgtggcattggcggtgatattactacaagcagatccacaactacctcagaaagtatagagcctaaactgtatggaagggatcctgagaagaataccattgtagaaaatattaccaagggtgtgcactgccatcaacatctatcagttcttcctatagttggtcttgggggcataggaaagacaacccttacacagtacatatataatactaaagaagtgcaagatcatttccaaattagagtttgggcatgtgtgtcgcttgacttcaacgtgtacaagttgacacaagagattttaaattctatccctaaagctgaagatgaaatagatgatagtcagctgcaaagtttggaccaacttcagaagttgattgaaaagagattaaaacaaaaaaggtttttagttgttttggatgatatatggaagtgtggtgaagaagagtgggaaaggctcctagttccatttagaaaaagtcaagtaaatgggaacataattctagtcacaacccgattctttgatgtggcagaaaaggttaaaactaccagttgtaaagtgacacaacttgacagattgaatcctgaagaattttggaagttctttatggcatgtgtgtttgggtatggtgaaactaagcaacacaaagaagatagggacttgattaacattgggaaacaaatagttgaaaaactaaaaggttctcccctagcagccaaaactgtaggtaggttattgagaaataacactactcgagactattggacaagagttcttcaaagtaaagaatgggatttacaaaccaatgattatgatattatgcctgctttgaagcttagctatgactacctcccttttcatcttcaacagtgcttctcttattgtgctttgtttcctgaggaccacaagtttagcagtgaggagctaattcacttctggatagggctagacattctacatccagatcacccaagccaaacaattgaagatatagggcacaactacttgaatcagttggttaattatgagtttttcaaaaaagaaatagatgagcagaaaacatactatgctatgcatgacctgctacatgatctagcacaaaaggtttcatcacaagaatgtctacatatagattcttccagtacaacacctatagaaatacctccaactatctatcacttgtccattagtctaagctctactaatagtgaggatggagctaccaaaggaagtttcaagaaagaactagatagaatagggagtagattgaaatctgaaaatctccactccttaatgatttttggacaatatgatcaaagctttgttgttactttatgtgatatgtttaaacatgcaaaatccctacgtcttgttcatttgtcaacaatgacacacccagtggattccatactttacaacttctcaaaacttctgcaccttcgctacataaagcttgagtcaaattatagagataaatcacatttaccagcaagcctctcaagattttatcacttaagggtcttggacattcaagaattgcggggtgctcacagtttccctaaggatatggccaatctatcaaagttgcgtcatttccttgtcccacctgatgcttctgaactccactccaatatttctagcgtgggaaaacttcattgtttacaagagctcaagcatttcgaagtaaaaaagaagggtgatggttttagcttaaaggaattgggggaactgacagaacttggaggaacactaagcatctttaatcttgagtacgtacaagtaaaggaagcacatgaagctaacctgctatacaaaagacgcttacatcatttagcattaaactggagtgacaaccgatctgacaagaatcctggcatagaaaatcaaatacttgagagccttcagccacatagcaatcttagtgagctacggatccaacatggaggctcaacttgcccaacatggctaggtacaagcctctcagtcaaaggtttagaggctctttgtctagttggtacaaattggaaaatgcatcctcctcttggtgaagtgtggcttattgatatgtctggtggagagtattttggttgtactaccagccaatactttcgaaacttaaaaagactggaaattattggactgtcaaattttagaaaatgggatgcaaaagaaatttgccctatgtggttttcagtcctagaaacactcactgtgacagattgcagtgaactaatagaactaccattttcatattatactcaacagccattggaaggtgatgggaaagaaacttggtttcctaggctaagagaggctaaaattatgaggtgtccgaaattggtgtcattgcctcctattccttacactcggactttgcgctatgttgaaataaataacgtagggataagcttggaaaagttatgttacgagagcgcaacatacaccttagaaattagagtaaaagatggtctaaatggcttagatgataaggttctagctttctataatttatcccaactacaagagttgatgatcaaggattgcccacctttggcggggtgttaccttcaaatgttgacttcactgaagatactcagacttgatagttcaagtgtcgtgttccatctgtcagaaagtttgagtgactataagtggcaagttccagttgagtacctatctatttctagctaccatggaagtgggaaagcattgtcacaggttctctctcatctcccaaagctctcagagttgactcttcgggactgcaacaagattacacggatgtgtatagctgtagaacagcagcaaacaactgctgttgagctggaggatacacaagcagtcgaatctattcagcagcagcaagtagcagaggatctggtggaggaagagggagtggtaccccagctagccatggatcaagaagatgacgatgggatgctgatcttcccagcacacctctccaactctctacagcgactagatctctccagttgcccggagcttatcctagatgttgctcgtcctgttcttcccaccagccacgaggaagggacaggaggatgggggctccaatccctgcactccctccagatactatatatatggcattgccccaagtttctctccacctacaatgccccaggctgccctttcccgtcctccctgcaatgcctcaacattgatggctgtatggagggcgtgcagaccctggatttcatctcaaacctcaacttcctcacagaactacacatcgaagattgtggggaggatttgagatgcgagggtctgtggcctctcctcacccagggtcagctcagcgaattaataagagtctatggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagcttcctcctcctcttcagtgttcctccaagctgcaggagctcaggacggatgactttgcaggtgtcctcgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggattcaacggcgaggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctccgggacctccaatttttggcatgcaggaagttgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcgtcagctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcggatactgcaacaacgagaagctcaaacagcggtgcaggaagctaaagggaaccatcccaaaaatcatactagactaacaaaggtaacaaatgcttccttgttccctctacctagtaagtcccatggcatcatctgttggggttttgatgtagtacttactacacaatctgattaaatgtttgttttttgcaatctgtcatgcagggcactgccttcaagttgtacattcctgtagccttgtagaacttcacaatctatccatgcactgttccccaacatgtggatctcatgtgatatcctctacctgtacatagatcttgtaagtaaacgttgaatggaacttgactcctgatgtaccatatccttgcctagatattcccagaaaactttttaaaacccatatataagaaacagctgtcatataggtctgatccctgtcatgaacaagttgctgcttgttgtaagcttgtctttgattaaacatgaatatatcttatgcttcaaggtagcatagtgtttttcttacgggctgtgtatttagggaatggttatggttaattagttgatgcaaactatttccattatctaaaaaatggtattacatagttgcataatcttgtaaatttacttaacaagtgagatgtcccaaatattttaattcctatcaaacagatgcactaagacgacctgtttctaatttttcctctttagtaatggatgtttccaatttttcctccgtagtaatggaagtaataagaatagatatttaaaatcatttttgagattttcttataagttgcaaatactaatttaatccacagttaatgccatttcagagttatgtggcaatcagattactcaccgttgttttggggtttgttgcgcaggtgttcttatgtgagttccagtagacttcttaatactttgggtgcatatttctggtcatcactcctgaagactaagtggtgtttagctagttgaattggcatacattatggatcaaaataccatcatggcttattggcttaataactgtggaaaatgataagtttgcagtgttctgcaactgatattaaggtttgcatttatttttgctccagctctatatttgctaccataaaatgtgttctagcagcatttaagttcttagttaccatttcttagagaaatttaatggcatcacaataatagcatcaaatcacattagtccatcatggagtcccttcagactcaggctaatattctgcccaacatgttcctatgaagattaatatgaactgatgtacggttccaaactttcagatttagatctgattattggattgcaagacagatgtggcagaaacacatctttggaaaccaacaatgtggcagttacgtgcttgaaggtataactcccatagtctcatctcgaatggtacgcagtcttgaacatttgcatttcaaatgatggcaatgcttcgatgctactgctttgagttgaccagagcattccagagcacaacataacatatgtcaggagatcttatttttcatgtttggactataaatagactaccatttgatccccctgtgtcgctaattttataccattcctggaaaatgtgtatatcattttctttgctcgatctagtaaacaccgttggaaaatgttcttctcctcatctccattttctgaacattgagttatgtgattacttaatggccttctcattgctttccatgtaaaagtaatttgatttttgttctgtccactaaataaggatgccagtattcaacaagctgcccacttgcaacctcagtgttttgattacgatgaatttccagcgttttgatatttgcttttggctttaatttttgccacccatacaaggttttgagcattagtcatagctattgttgcttaacataatttaatggtgaacagggccttcacaagaataaccatcttatcatgtcagtgtatcatggagtcccttcagatttcagtctattattatgctcaataggttcttatggaaggtacttttgtaattgttttatgttccatttgcagagaagtagaaatatgaactgatatgtggttcccaaactttcagattcataagtatgacttttgaattgcttgctagttgtgcgctgtagtacgctagcacagctttgaaagtgaatagcgtggcaataaacaggcctgatagctgccatagactcaatgtgtgttcaagtgccaagtagtcctggacactatttgcacttcaaattatatgaatgctttcatgttattgaacagaccataattttccgctgcagcgttgtacaggttaggaggactacttattcatgttacaagtatcattgtattattcttatctttatatcgggttatgtggctacttaattgtttctcattgctttgcatcacaacgttcaattttgtattaggagtctttggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagctttctcctcttcagtgttcctccaagctgcaggagcttcatacggatgacttcgcaggtgtccacgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacgaggtggagcgtttcacgaaggagcaagaggaggcacttcagcttctcatctccctccaggacctccatttttggggatgcactaatctgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcatcggctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcagagctagctggaacgagaagttcaaacagcggtgcaggaagctaaagggaaccatcccagaaatcatactagactaataaaggtaacaaatgcttccctgttccccatacctaagtcccatggcatcatctgttgatcttgtgcaatatcctcttcctgtacatatattatgtaagtagatgtagaatggaacttcactcctgatgtaccatttccatgcatgcacaacaaacatttttaaaatccatactgaagaaagagatgccaatatgccatataggtatcccacctgtcatgaattgttgctgttgttgtacacttgcctttgattaaaaacgaatatatcttaatcttatgctttaaggttgcatggtttttcagtaccatcagtgtatttagggaatcgttatggttagttgatgtaaaccatttctgttatgtgaaaaaatgttcatggttagttgcataatcctgtaaattcacttgtgctgtaagatgttccaaacactatatcaaacagatgcactaagttgaccagtttccaatttttactctttagtagtggaattagtgagaacaggtaacttaaatcattttggagatttttttctcataagattcaaatactaatttaatccatagttaatgccatttcagagttatgttgcaatcagattactcaccattgttttgggagtttgttgtgcaggtgttcttttgtgagttccagtaggcttcttaatacttcggttgtattatattttggtcatcactcctgaagaaccagtggtgttcagctagttgcactgacatacattatggatcaaaatatcatcacggcataataatggtggaacatggtaaattccagtgctctgcaactgatattgtttttcactccagtggtacgtttgctactataaaaggtgttctaacattgtttaatttattagttaccatttcttagtgaaatttaatggcgtaccggaccgtcacaagaaaacccaatcaaatcatatcagtgcatcatggagtcccttcagactctggctagtattatgctcaacatgttctcatgaaacagtagttgtataactatttttatgttctccttgtgaaaaagtagtaatatgaactgacgtatggttccaaactttcagattcagaactacgattattggattgctagatagtgcggcagcggcacagctttggaaaccaacagtgtggcaaactggcagttacatgcttgaaggttttagttcccatactctcagtgttctcaaatggtatgcagtcttgaacatttgcatttcggaagatgggtatgcttctgtgttactgcttaggtatttagctaaccagatattccagcaaagcagaacagatttcaggagtatttatttttcatgtttgagctataaatagactactatttgatccacctgtgacgctaatttataccattcctgggagttgttaagtatgtcattttgtttccttgatggtcgatctagtaaacaccgttggaaaatgttttcctcctttagttcatgttgttttatcttaaaacttcagaacatctccaatttctgaacatgtacagtactgatatttgaagtaaaattgtgtattttttatctattttttggaaacattccaccctcttatcactggatgaatattacaaacaagggaacaaactgtacaatggcaagacaagtgaacgacacgatggtcaaaagaagagaagaaaaactagtgtgcctagcacactcttgaagcgcaattgaacctctgtaactccggtctgtcggcttcttcatattgagttgtacggttacttaattgccttctcactgatgtccatgtcaaagtaattcattttttttgttatgtccactaaatcaggatgcacagtatttaacgtgctgcccaacttcatacttgcaatctcgcttaactagtgacagaatggtaacattgtaagtgcctcactactattaatcttcttcctttacaattagatgcatactgttggaagttaatgtcaaattatattattacaatgatacttcagttctgtatatcatctccttggaatccccatgtcctcacaaaaagtgtgattggttcaggcagtcttcttctactgacagaggcatgaaaatggtactttctggtggatgcaactttatctgttcaaaatgctaatgtgtcaatggtagacgtaatttttggaccacaggttgtaaaatcagttctgaatctcctaggaccttgatgtcttggttgcagcctctgcaagctacaaatctcttcccttgtgctatcctcaatgacttgctcttcattttgttcatccatttatgcagtgaaccaaagcgccttagattagactgtttgcactctattaccgggaattgttgcagcgaacttccaaacaggtatcctaaatcattatttgacattttttctcaaagtttgcaaatactaatttgatccacagttattgtcatttcatagtaacttctcattgagattacacactattgttttggggttttttcggcaggttgtcacttatgaggaattagtagtgtttggctagtcatggcataacaactgtggaaaacaatgagtgttcagtgttttgctacttggattaaggtttgcagttctcttgctccagtgctatatttctgacacatacaaggtgtactagaatccttcattcttatagttatgttgcttaacgaaatttactggtgtacagaacactcacaagaatagccattacatcatattagttcattgtggagtcccttcagatctcaggttaatattatatggaacgcgttaatatgagaggtacgtctttagctgttttatgttctactcacgaaaaagtagtaatatgaagatatgtatggtttttaactttcagattcataactatgattgttggattgcttgatatgtatcgatatatgacccagcttttggaaccaacaatgcagtagtaatatgcttgaaggtatagcttccataatctccaaatattttaaactattttgccatcttgactcctgaacacgatttgcactttaatggatgtgaatgcttccatgtatataaaagaagaaatcgcgatgtggagggtagctgggatcttctcccaattcggcgagtaatcgttgttgtattgtctctttctccttcgtttgttcacgatgtgtctgggatctctcccggactagcgcgacattgtaatgtcgctgtaacattcctttgttttcctccccaatcttaatgaaattggtcggccaacctttggccgacccagcaaaaaagaatgcttccatgttactgcttagttattcaactgacctgcactccatagcacaccagtacaagtttgcaggagaacttatattttcattgtttgagctacaaatagattaccatttgattctcatgtgtcagttctttgtgctattcatgaaaacttccttattaagtatgccatgttctttccttcaatctagtattggaattaccattgggaaatatttttctttcccaatccaactttgttgatcttaaggcttcagaacttctacgttttctaaacatttaaattgataatgtttgaagggcattgttttttattcttcatatcaagttgtgctgttatgtatttttcttctcattgctttccatgataaactggttagatttttgaaatgtccatctcttccgaatatttacatcctgcccaactacatggaatcctcatatgagctgacaaaaggtgtattggtttaggtaaatcttctattgacaccaactacatgaaatcggtactgtccaagggatgcagcttaatctgttcaaggcgctaatgtgccaatgccagatgtaatttttgaaccacatgttgcataatatgtagtgagttcccttgttccctatgaacttaaagtcttgtttgcatcctctgcaccccaaaatcccttgcttgtggtatcgtcaatgacttgatgtgcattctgttcatcccttatgcagggaacaaaaggcttagttcaatgaacataaatgactggaattattgcaatgaacgtccaaacagtctagctccttccctttatatggtgagtgctatacaacttgttctagttctttcaaactttagtagctactgcaaagtatttactctgttgagaagtacttacatttttgttgtccactttggcagaagaagacataatatggataagtgctcaattgcactgtctcttctcagcggataaatggcaattgggcaattgatctccacccggtgatctccacccaagctcaacttgaattagatatgcttatgacgactttacaatcccagcagatacatcctgaaagaccagataacagaagctgtacactgagcccggttggatttacgacaacagcatactatgagctaataacatatcatggcatcctatggcgcccggcacacttcatctggattaaagcaataccaaacacctgcaaaatcttcctttggctagcctttcggggaaggctaaacacaaatgataacagggtgaagaaatgctgggcatctgatccacattgtgcggtttgcccggctatagaaacagctaatcacatcattctacgctgcaagttagccactgaaatctggaacaaactcaacctccttgatcaggcaattcagagtgctgacattctacagttcaccgagcatgtcctgggaattctaccgactcaacttaaactgggatggccaatatgcttcgctgcctgttcacacagcttatgaaaagcacgcaatcatagaaccttcagagaagaagaactctccgtaactaatgtgacgcatcaaatcaaggactgcctacacttatggaaaaaccgagttaaaccacaatgtcagccgccaatatgtagttgggcagctctactagcatagatgttgtttttctgtttgtttgtggttctctctaatccctttcttccttcttttctacctcttctttttcttgcctttctgcttgaatgtatttttgttatatctttttttaccaccattaatacaatggttataaggtagagcctctctaccttttcagtcaaaaaaaatatggataaa
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| CDS seq | atggcagagtcggtggccatccgcggtgcacagtgggttgtgagcaaggcgctgagcccgctgtccgatggcttggtagaggcgtgggcggccagctcggcgctcggccccaacatcgaagctctcaagacagagcttctctacgcacaggccatgctcgacaatgcccgtggcagggagatccgaagccatgctctggtggagttgctgcagaagctacggcggctagcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacgagctcgaaggcaccttcgagaccgtcgaccgtgggtgcttccacgacctcgtccgtgatgcacgccacacaaccaaggctgctgccaagcagctcgagtgcacctcctgcttctcttcttcgtccatgccagaacatggtggcgcaagaaggcgggtgctgtgtggcgcttggctgtgctgcggcgccgatgagaaacaatcctgcaagtgcgcgtgccagctcgtcaaccgtgctagcagcactgtccgcgctgtcgaaagtttgagtgactataagtggcaagttccagttgagtacctatctatttctagctaccatggaagtgggaaagcattgtcacaggttctctctcatctcccaaagctctcagagttgactcttcgggactgcaacaagattacacggatgtgtatagctgtagaacagcagcaaacaactgctgttgagctggaggatacacaagcagtcgaatctattcagcagcagcaagtagcagaggatctggtggaggaagagggagtggtaccccagctagccatggatcaagaagatgacgatgggatgctgatcttcccagcacacctctccaactctctacagcgactagatctctccagttgcccggagcttatcctagatgttgctcgtcctgttcttcccaccagccacgaggaagggacaggaggatgggggctccaatccctgcactccctccagatactatatatatggcattgccccaagtttctctccacctacaatgccccaggctgccctttcccgtcctccctgcaatgcctcaacattgatggctgtatggagggcgtgcagaccctggatttcatctcaaacctcaacttcctcacagaactacacatcgaagattgtggggaggatttgagatgcgagggtctgtggcctctcctcacccagggtcagctcagcgaattaataagagtctatggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagcttcctcctcctcttcagtgttcctccaagctgcaggagctcaggacggatgactttgcaggtgtcctcgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggattcaacggcgaggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctccgggacctccaatttttggcatgcaggaagttgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcgtcagctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcggatactgcaacaacgagaagctcaaacagcgatttagatctgattattggattgcaagacagatgtggcagaaacacatctttggaaaccaacaatgtggcagttacgtgcttgaaggtataactcccatagtctcatctcgaatgggccttcacaagaataaccatcttatcatgtcagtgtatcatggagtcccttcagatttcagtctattattatgctcaataggttcttatggaaggtacttttaccataattttccgctgcagcgttgtacaggagtctttggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagctttctcctcttcagtgttcctccaagctgcaggagcttcatacggatgacttcgcaggtgtccacgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacgaggtggagcgtttcacgaaggagcaagaggaggcacttcagcttctcatctccctccaggacctccatttttggggatgcactaatctgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcatcggctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcagagctagctggaacgagaagttcaaacagcggtgcaggaagctaaagggaaccatcccagaaatcatactagactaa
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| Protein seq | MAESVAIRGAQWVVSKALSPLSDGLVEAWAASSALGPNIEALKTELLYAQAMLDNARGREIRSHALVELLQKLRRLAYNAEDVLDELDYFRIQDELEGTFETVDRGCFHDLVRDARHTTKAAAKQLECTSCFSSSSMPEHGGARRRVLCGAWLCCGADEKQSCKCACQLVNRASSTVRAVESLSDYKWQVPVEYLSISSYHGSGKALSQVLSHLPKLSELTLRDCNKITRMCIAVEQQQTTAVELEDTQAVESIQQQQVAEDLVEEEGVVPQLAMDQEDDDGMLIFPAHLSNSLQRLDLSSCPELILDVARPVLPTSHEEGTGGWGLQSLHSLQILYIWHCPKFLSTYNAPGCPFPSSLQCLNIDGCMEGVQTLDFISNLNFLTELHIEDCGEDLRCEGLWPLLTQGQLSELIRVYGTPRFFAGLDPILGGLQDGQEQQLPPPLQCSSKLQELRTDDFAGVLVKPICRLLSSSLTKLVLGFNGEVERFMKEQEEALQLLTSLRDLQFLACRKLQCLPAGLHRLTSLKRLEIVSCPSIRSLPKGGLPSSLQELDVGYCNNEKLKQRFRSDYWIARQMWQKHIFGNQQCGSYVLEGITPIVSSRMGLHKNNHLIMSVYHGVPSDFSLLLCSIGSYGRYFYHNFPLQRCTGVFGTPRFFAGLDPILGGLQDGQEQQLSPLQCSSKLQELHTDDFAGVHVKPICRLLSSSLTKLVLGWNDEVERFTKEQEEALQLLISLQDLHFWGCTNLQCLPAGLHRLTSLKRLEIIGCPSIRSLPKGGLPSSLQELDVRASWNEKFKQRCRKLKGTIPEIILD |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0027930 | OsCMeo_04g0027930.01 | Chr04 | 31826348 | 31838874 | + | NAM | ||
| CDS seq | atggcagagtcggtggccatccgcggtgcacagtgggttgtgagcaaggcgctgagcccgctgtccgatggcttggtagaggcgtgggcggccagctcggcgctcggccccaacatcgaagctctcaagacagagcttctctacgcacaggccatgctcgacaatgcccgtggcagggagatccgaagccatgctctggtggagttgctgcagaagctacggcggctagcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacgagctcgaaggcaccttcgagaccgtcgaccgtgggtgcttccacgacctcgtccgtgatgcacgccacacaaccaaggctgctgccaagcagctcgagtgcacctcctgcttctcttcttcgtccatgccagaacatggtggcgcaagaaggcgggtgctgtgtggcgcttggctgtgctgcggcgccgatgagaaacaatcctgcaagtgcgcgtgccagctcgtcaaccgtgctagcagcactgtccgcgctgtcgaaagtttgagtgactataagtggcaagttccagttgagtacctatctatttctagctaccatggaagtgggaaagcattgtcacaggttctctctcatctcccaaagctctcagagttgactcttcgggactgcaacaagattacacggatgtgtatagctgtagaacagcagcaaacaactgctgttgagctggaggatacacaagcagtcgaatctattcagcagcagcaagtagcagaggatctggtggaggaagagggagtggtaccccagctagccatggatcaagaagatgacgatgggatgctgatcttcccagcacacctctccaactctctacagcgactagatctctccagttgcccggagcttatcctagatgttgctcgtcctgttcttcccaccagccacgaggaagggacaggaggatgggggctccaatccctgcactccctccagatactatatatatggcattgccccaagtttctctccacctacaatgccccaggctgccctttcccgtcctccctgcaatgcctcaacattgatggctgtatggagggcgtgcagaccctggatttcatctcaaacctcaacttcctcacagaactacacatcgaagattgtggggaggatttgagatgcgagggtctgtggcctctcctcacccagggtcagctcagcgaattaataagagtctatggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagcttcctcctcctcttcagtgttcctccaagctgcaggagctcaggacggatgactttgcaggtgtcctcgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggattcaacggcgaggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctccgggacctccaatttttggcatgcaggaagttgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcgtcagctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcggatactgcaacaacgagaagctcaaacagcgatttagatctgattattggattgcaagacagatgtggcagaaacacatctttggaaaccaacaatgtggcagttacgtgcttgaagaccataattttccgctgcagcgttgtacaggagtctttggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagctttctcctcttcagtgttcctccaagctgcaggagcttcatacggatgacttcgcaggtgtccacgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacgaggtggagcgtttcacgaaggagcaagaggaggcacttcagcttctcatctccctccaggacctccatttttggggatgcactaatctgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcatcggctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcagagctagctggaacgagaagttcaaacagcggtgcaggaagctaaagggaaccatcccagaaatcatactagactaa
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| Protein seq | MAESVAIRGAQWVVSKALSPLSDGLVEAWAASSALGPNIEALKTELLYAQAMLDNARGREIRSHALVELLQKLRRLAYNAEDVLDELDYFRIQDELEGTFETVDRGCFHDLVRDARHTTKAAAKQLECTSCFSSSSMPEHGGARRRVLCGAWLCCGADEKQSCKCACQLVNRASSTVRAVESLSDYKWQVPVEYLSISSYHGSGKALSQVLSHLPKLSELTLRDCNKITRMCIAVEQQQTTAVELEDTQAVESIQQQQVAEDLVEEEGVVPQLAMDQEDDDGMLIFPAHLSNSLQRLDLSSCPELILDVARPVLPTSHEEGTGGWGLQSLHSLQILYIWHCPKFLSTYNAPGCPFPSSLQCLNIDGCMEGVQTLDFISNLNFLTELHIEDCGEDLRCEGLWPLLTQGQLSELIRVYGTPRFFAGLDPILGGLQDGQEQQLPPPLQCSSKLQELRTDDFAGVLVKPICRLLSSSLTKLVLGFNGEVERFMKEQEEALQLLTSLRDLQFLACRKLQCLPAGLHRLTSLKRLEIVSCPSIRSLPKGGLPSSLQELDVGYCNNEKLKQRFRSDYWIARQMWQKHIFGNQQCGSYVLEDHNFPLQRCTGVFGTPRFFAGLDPILGGLQDGQEQQLSPLQCSSKLQELHTDDFAGVHVKPICRLLSSSLTKLVLGWNDEVERFTKEQEEALQLLISLQDLHFWGCTNLQCLPAGLHRLTSLKRLEIIGCPSIRSLPKGGLPSSLQELDVRASWNEKFKQRCRKLKGTIPEIILD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0027930 | OsCMeo_04g0027930.04 | Chr04 | 31834724 | 31838544 | + | NAM | ||
| CDS seq | atggagtcccttcagactctggctagtattatgctcaacatattcagaactacgattattggattgctagatagtgcggcagcggcacagctttggaaaccaacagtgtggcaaactggcagttacatgcttgaaggttttagttcccatactctcagtgttctcaaatgtgaaccaaagcgccttagattagactgtttgcactctattaccgggaattgttgcagcgaacttccaaacagatttttgaaatgtccatctcttccgaatatttacatcctgcccaactacatggaatcctcatatgagctgacaaaagggaacaaaaggcttagttcaatgaacataaatgactggaattattgcaatgaacgtccaaacagtctagctccttccctttatatgcggataaatggcaattgggcaattgatctccacccggtgatctccacccaagctcaacttgaattagatatgcttatgacgactttacaatcccagcagatacatcctgaaagaccagataacagaagctgtacactgagcccggttggatttacgacaacagcatactatgagctaataacatatcatggcatcctatggcgcccggcacacttcatctggattaaagcaataccaaacacctgcaaaatcttcctttggctagcctttcggggaaggctaaacacaaatgataacagggtgaagaaatgctgggcatctgatccacattgtgcggtttgcccggctatagaaacagctaatcacatcattctacgctgcaagttagccactgaaatctggaacaaactcaacctccttgatcaggcaattcagagtgctgacattctacagttcaccgagcatgtcctgggaattctaccgactcaacttaaactgggatggccaatatgcttcgctgcctgttcacacagcttatga
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| Protein seq | MESLQTLASIMLNIFRTTIIGLLDSAAAAQLWKPTVWQTGSYMLEGFSSHTLSVLKCEPKRLRLDCLHSITGNCCSELPNRFLKCPSLPNIYILPNYMESSYELTKGNKRLSSMNINDWNYCNERPNSLAPSLYMRINGNWAIDLHPVISTQAQLELDMLMTTLQSQQIHPERPDNRSCTLSPVGFTTTAYYELITYHGILWRPAHFIWIKAIPNTCKIFLWLAFRGRLNTNDNRVKKCWASDPHCAVCPAIETANHIILRCKLATEIWNKLNLLDQAIQSADILQFTEHVLGILPTQLKLGWPICFAACSHSL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0027930 | OsCMeo_04g0027930.03 | Chr04 | 31826348 | 31838873 | + | NAM | ||
| CDS seq | atggcagagtcggtggccatccgcggtgcacagtgggttgtgagcaaggcgctgagcccgctgtccgatggcttggtagaggcgtgggcggccagctcggcgctcggccccaacatcgaagctctcaagacagagcttctctacgcacaggccatgctcgacaatgcccgtggcagggagatccgaagccatgctctggtggagttgctgcagaagctacggcggctagcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacgagctcgaaggcaccttcgagaccgtcgaccgtgggtgcttccacgacctcgtccgtgatgcacgccacacaaccaaggctgctgccaagcagctcgagtgcacctcctgcttctcttcttcgtccatgccagaacatggtggcgcaagaaggcgggtgctgtgtggcgcttggctgtgctgcggcgccgatgagaaacaatcctgcaagtgcgcgtgccagctcgtcaaccgtgctagcagcactgtccgcgctgtcgaaagtttgagtgactataagtggcaagttccagttgagtacctatctatttctagctaccatggaagtgggaaagcattgtcacaggttctctctcatctcccaaagctctcagagttgactcttcgggactgcaacaagattacacggatgtgtatagctgtagaacagcagcaaacaactgctgttgagctggaggatacacaagcagtcgaatctattcagcagcagcaagtagcagaggatctggtggaggaagagggagtggtaccccagctagccatggatcaagaagatgacgatgggatgctgatcttcccagcacacctctccaactctctacagcgactagatctctccagttgcccggagcttatcctagatgttgctcgtcctgttcttcccaccagccacgaggaagggacaggaggatgggggctccaatccctgcactccctccagatactatatatatggcattgccccaagtttctctccacctacaatgccccaggctgccctttcccgtcctccctgcaatgcctcaacattgatggctgtatggagggcgtgcagaccctggatttcatctcaaacctcaacttcctcacagaactacacatcgaagattgtggggaggatttgagatgcgagggtctgtggcctctcctcacccagggtcagctcagcgaattaataagagtctatggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagcttcctcctcctcttcagtgttcctccaagctgcaggagctcaggacggatgactttgcaggtgtcctcgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggattcaacggcgaggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctccgggacctccaatttttggcatgcaggaagttgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcgtcagctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcggatactgcaacaacgagaagctcaaacagcgatttagatctgattattggattgcaagacagatgtggcagaaacacatctttggaaaccaacaatgtggcagttacgtgcttgaaggtataactcccatagtctcatctcgaatggttcttatggaagaccataattttccgctgcagcgttgtacaggagtctttggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagctttctcctcttcagtgttcctccaagctgcaggagcttcatacggatgacttcgcaggtgtccacgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacgaggtggagcgtttcacgaaggagcaagaggaggcacttcagcttctcatctccctccaggacctccatttttggggatgcactaatctgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcatcggctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcagagctagctggaacgagaagttcaaacagcggtgcaggaagctaaagggaaccatcccagaaatcatactagactaa
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| Protein seq | MAESVAIRGAQWVVSKALSPLSDGLVEAWAASSALGPNIEALKTELLYAQAMLDNARGREIRSHALVELLQKLRRLAYNAEDVLDELDYFRIQDELEGTFETVDRGCFHDLVRDARHTTKAAAKQLECTSCFSSSSMPEHGGARRRVLCGAWLCCGADEKQSCKCACQLVNRASSTVRAVESLSDYKWQVPVEYLSISSYHGSGKALSQVLSHLPKLSELTLRDCNKITRMCIAVEQQQTTAVELEDTQAVESIQQQQVAEDLVEEEGVVPQLAMDQEDDDGMLIFPAHLSNSLQRLDLSSCPELILDVARPVLPTSHEEGTGGWGLQSLHSLQILYIWHCPKFLSTYNAPGCPFPSSLQCLNIDGCMEGVQTLDFISNLNFLTELHIEDCGEDLRCEGLWPLLTQGQLSELIRVYGTPRFFAGLDPILGGLQDGQEQQLPPPLQCSSKLQELRTDDFAGVLVKPICRLLSSSLTKLVLGFNGEVERFMKEQEEALQLLTSLRDLQFLACRKLQCLPAGLHRLTSLKRLEIVSCPSIRSLPKGGLPSSLQELDVGYCNNEKLKQRFRSDYWIARQMWQKHIFGNQQCGSYVLEGITPIVSSRMVLMEDHNFPLQRCTGVFGTPRFFAGLDPILGGLQDGQEQQLSPLQCSSKLQELHTDDFAGVHVKPICRLLSSSLTKLVLGWNDEVERFTKEQEEALQLLISLQDLHFWGCTNLQCLPAGLHRLTSLKRLEIIGCPSIRSLPKGGLPSSLQELDVRASWNEKFKQRCRKLKGTIPEIILD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0027930 | OsCMeo_04g0027930.02 | Chr04 | 31826348 | 31838873 | + | NAM | ||
| CDS seq | atggcagagtcggtggccatccgcggtgcacagtgggttgtgagcaaggcgctgagcccgctgtccgatggcttggtagaggcgtgggcggccagctcggcgctcggccccaacatcgaagctctcaagacagagcttctctacgcacaggccatgctcgacaatgcccgtggcagggagatccgaagccatgctctggtggagttgctgcagaagctacggcggctagcgtacaacgccgaggacgtgctggacgagctggactacttccgcatccaggacgagctcgaaggcaccttcgagaccgtcgaccgtgggtgcttccacgacctcgtccgtgatgcacgccacacaaccaaggctgctgccaagcagctcgagtgcacctcctgcttctcttcttcgtccatgccagaacatggtggcgcaagaaggcgggtgctgtgtggcgcttggctgtgctgcggcgccgatgagaaacaatcctgcaagtgcgcgtgccagctcgtcaaccgtgctagcagcactgtccgcgctgtcgaaagtttgagtgactataagtggcaagttccagttgagtacctatctatttctagctaccatggaagtgggaaagcattgtcacaggttctctctcatctcccaaagctctcagagttgactcttcgggactgcaacaagattacacggatgtgtatagctgtagaacagcagcaaacaactgctgttgagctggaggatacacaagcagtcgaatctattcagcagcagcaagtagcagaggatctggtggaggaagagggagtggtaccccagctagccatggatcaagaagatgacgatgggatgctgatcttcccagcacacctctccaactctctacagcgactagatctctccagttgcccggagcttatcctagatgttgctcgtcctgttcttcccaccagccacgaggaagggacaggaggatgggggctccaatccctgcactccctccagatactatatatatggcattgccccaagtttctctccacctacaatgccccaggctgccctttcccgtcctccctgcaatgcctcaacattgatggctgtatggagggcgtgcagaccctggatttcatctcaaacctcaacttcctcacagaactacacatcgaagattgtggggaggatttgagatgcgagggtctgtggcctctcctcacccagggtcagctcagcgaattaataagagtctatggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagcttcctcctcctcttcagtgttcctccaagctgcaggagctcaggacggatgactttgcaggtgtcctcgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggattcaacggcgaggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctccgggacctccaatttttggcatgcaggaagttgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcgtcagctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcggatactgcaacaacgagaagctcaaacagcgatttagatctgattattggattgcaagacagatgtggcagaaacacatctttggaaaccaacaatgtggcagttacgtgcttgaaggtataactcccatagtctcatctcgaatgggccttcacaagaataaccatcttatcatgtcagtgtatcatggagtcccttcagatttcagtctattattatgctcaataggttcttatggaaggtacttttaccataattttccgctgcagcgttgtacaggagtctttggaacacccagattctttgctggtttggatcccatactcggggggctgcaggacggacaagagcagcagctttctcctcttcagtgttcctccaagctgcaggagcttcatacggatgacttcgcaggtgtccacgtgaagcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacgaggtggagcgtttcacgaaggagcaagaggaggcacttcagcttctcatctccctccaggacctccatttttggggatgcactaatctgcagtgcctccctgcggggctacatagacttaccagcctcaagagattagagatcatcggctgtccatccatccggtcgctgcccaagggtggcctccccagttcactgcaagaactagatgtcagagctagctggaacgagaagttcaaacagcggtgcaggaagctaaagggaaccatcccagaaatcatactagactaa
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| Protein seq | MAESVAIRGAQWVVSKALSPLSDGLVEAWAASSALGPNIEALKTELLYAQAMLDNARGREIRSHALVELLQKLRRLAYNAEDVLDELDYFRIQDELEGTFETVDRGCFHDLVRDARHTTKAAAKQLECTSCFSSSSMPEHGGARRRVLCGAWLCCGADEKQSCKCACQLVNRASSTVRAVESLSDYKWQVPVEYLSISSYHGSGKALSQVLSHLPKLSELTLRDCNKITRMCIAVEQQQTTAVELEDTQAVESIQQQQVAEDLVEEEGVVPQLAMDQEDDDGMLIFPAHLSNSLQRLDLSSCPELILDVARPVLPTSHEEGTGGWGLQSLHSLQILYIWHCPKFLSTYNAPGCPFPSSLQCLNIDGCMEGVQTLDFISNLNFLTELHIEDCGEDLRCEGLWPLLTQGQLSELIRVYGTPRFFAGLDPILGGLQDGQEQQLPPPLQCSSKLQELRTDDFAGVLVKPICRLLSSSLTKLVLGFNGEVERFMKEQEEALQLLTSLRDLQFLACRKLQCLPAGLHRLTSLKRLEIVSCPSIRSLPKGGLPSSLQELDVGYCNNEKLKQRFRSDYWIARQMWQKHIFGNQQCGSYVLEGITPIVSSRMGLHKNNHLIMSVYHGVPSDFSLLLCSIGSYGRYFYHNFPLQRCTGVFGTPRFFAGLDPILGGLQDGQEQQLSPLQCSSKLQELHTDDFAGVHVKPICRLLSSSLTKLVLGWNDEVERFTKEQEEALQLLISLQDLHFWGCTNLQCLPAGLHRLTSLKRLEIIGCPSIRSLPKGGLPSSLQELDVRASWNEKFKQRCRKLKGTIPEIILD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 31832250 | 31832843 | + | OsCMeo_04g0027930.02 | OsCMeo_04g0027930.02,OsCMeo_04g0027930.03 | All |
| A3 | Chr04 | 31837852 | 31838005 | + | OsCMeo_04g0027930.02,OsCMeo_04g0027930.03,OsCMeo_04g0027930.01 | OsCMeo_04g0027930.04,OsCMeo_04g0027930.01,OsCMeo_04g0027930.02,OsCMeo_04g0027930.03 | All |
| A5 | Chr04 | 31832855 | 31833124 | + | OsCMeo_04g0027930.02 | OsCMeo_04g0027930.02,OsCMeo_04g0027930.03 | All |
| A5 | Chr04 | 31834744 | 31834856 | + | OsCMeo_04g0027930.04 | OsCMeo_04g0027930.01,OsCMeo_04g0027930.02,OsCMeo_04g0027930.04,OsCMeo_04g0027930.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.544536 | 1.443015 | 6.525374 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0626500 | RBH | 1.449855 | 1.839052 | 2.533673 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g53496 | RBH | 0.332108 | 0.119212 | 0.141505 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0626500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027430 | RBH | 0.000000 | 2.896392 | 3.144222 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028110 | RBH | 0.000000 | 0.000000 | 0.769872 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005940 | SBH | 0.559543 | 9.146810 | 0.293873 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0027670 | RBH | 0.015382 | 0.066013 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0027950 | SBH | 1.853218 | 19.699261 | 5.510958 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0503000 | SBH | 1.1102425 | 2.785596 | 3.067995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026620 | RBH | 0.066260 | 0.133214 | 0.369819 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0507000 | SBH | 0.2745435 | 0.2969485 | 0.9896195 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027030 | RBH | 0.000000 | 0.258998 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0026890 | RBH | 0.093515 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0026930 | RBH | 0.0 | 7.217812 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027460 | RBH | 1.428781 | 3.802756 | 1.482755 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027550 | RBH | 0.406676 | 3.068031 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G026840 | RBH | 0.173872 | 1.972238 | 1.368266 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0026690 | SBH | 0.0 | 1.515105 | 0.351088 |
