Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_11g0007780 OGI:11020290 | 6/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr11:6533569-6542838
Gene Symbol -
DNA seq

GACAGGGATAGAGGTAGGGGAGAGACAGAGAGAGAGGGGCCGGGGGATCGAGTGGTCAACATGGATGCTCCGGTACTTAGTTCTTCGCTTGCCCTTGGTGCCATGAGTCCCCTGCTCGGTAAGCTCGATGAACTCCTTGCTAGTACGGAGCACACGGCACCGAGCATCCAGCAAATCAGAGCCAATCTTGGCATCACAAGCACACGCCTGGTCGAGCTCTCCATGTTGCAAGATCCTCCCCTCGTGGCCAAGTACTGGATGAAGGATGCGCGCGAGCTGTCCTATGACATGGAGGACTGCCTCGACCTCGACCAGGTCGCCGGCGGCGGCGAGGAGGCGGATTGGATCGATCGCATCGCTGGGTTCAGATCTCGCGTGGAGGAGGCCAATAGACGGTACGAGAGGTACAATCTTGATTCCATCCTTGGCTCCTCCACAAACATTCCAATCGACCACCGCCTTAAGCCGGCCGTCGGGAAGCCGGCGATGGAGCATGTTGGTATGGAAGGGCCGATGGATGAGCTCCGCCGGTGGCTGACCGACGAGGCGCAGGAGCTCAAGGTGGTATCTATCGTCGGCGTTGGAGGGGTGGGTAAGAGCACGTTTGCGCAGAAACTATGGCGGAAACTTGGTGGACAATTCGATTGCCGGGCTTTTGTGCACACGGCCAAGAAGCCTGACATGAGGAGGATTTTGAGGAGCATACTCTCTCAAGTTCGTCCGCGACAACAGCCCGAGGTTTGTGAGGTGCATAACCTCTTAGAAGATCTCAGAAAACATCTACTAGATAAGAGGTAATCTTGATTCGCTACGTTTTACTGAAAAAGAAAGGGACCATTCACCATCAAACAACCGCATGCATTTTCCTTAAGTTTCAGGTGATTCTTAATTGCTGGATTTGATTTTAGGATCAATTTAATGAGCTTTTCTTGTCATTTTTGTTCAACAATGTTCTTTTCATTATTGCAAAAATATAAGTAAATAGTCCACCTAAAATCGTTCTTAAAAACCAAGCTTCAAAAATCAAAATTGCTTTGGCTTCTAAGAGAAGTTGAGCCATGCACAGCTGGCCATGTTGGTCCATGTGTTGAAGGATAATTTCTATTGAAGTCTTAAGAAAAAAAAAACTGTAACCATTCATCATCTACGTCTGCAGTTATCTGAACTTGGTTTCTGCCTAAAAAGCCTGTACCTGTATTGCTCCATTCTATTTTCTCTTTTGCTATTTACCTGACAAGACTTGTTATTGTGTTCAAAATTATTTCTCAGGTACTTCATTATAGTGGAAGATTTATGGGATACATCAGTATGGGATGTTGTTAGCCGTGCTTTTCCAAAGGGTAATTGTGGTAGCAGAATAGTAACAACGACAAAATTTGAGGAAGTTGCTCTGACTTCTTGTGGTTATCACTCTAAGTACGTATTTAAGATAAAACCTCTTAGTGAGGATCTCTCGAAGGAATTGATTGTCAGAAGAGTTTTTGTATCCGGCAAAGGATGTCCTCAACAATGCAGTGCCATTTTAGATGAGATTACAAACAAATGTGGCGGTTTACCACTAGCTCTAAACATCATCGCCAGTCTTCTATCTTGCCAACATGAAGTATTAGAGCACTGGAAACATGCAAGGGATTTTTTATGCAACAGTTTGAGGACAAATCCAACTTTTGATGAGATTCTGAAACAAGTAGTAAACCTTTGCTACAATAGTCTTCCCCATTGTTTGAAGACATGTCTACTTTATTTTAGCATATATCCAGAGAATTACACAGTTATGAAGGAAGATTTGGTGAAGCAGTGGGCAGCTGAAGGTTTTCTCTGTGCAACAAAAGGAGAAGAAATTATGGCAGTTGCAGTGAGCTGTTTTGACAGGCTTGTCAATTTAGGATTGATTCAACCTATTGATATCAATTATAATGATAAGGTGGTGCACTATGCAGTGAATAACATGGTACTTGATATTATTACTTATAAGTCCATAGAAGAAAATTTTATCACTGTAATGGATAAGGATTGTTATCAGATGAGTATAGAACTTTCTGACAAGGTTCGCCGACTGTCGCTCCACTTTGGCAGTGCAACATATGCAACTATACCAGCAGGTATTGGACTATCCCAAGTTCGATCACTTACCTTTATTGGTTTGTTCAATTGCCTGCCTTCCATTGTGAAATTTAAGCTTGTCCGAGTTGTGATCCTTCATTTTTTGGGTGATCATGGAAACTTGAGTTTGAATCTCAGAAAACTAGGTGAACTGTCTCAGTTGAAGTATCTGCAGATAAAATGTAATGTCACCGTGGAGCTACCATATCAGATGCAAGGGCTAAAACATTTGGAAGCATTGGAAATAAGAGCAAGAACAGTGTCTATTCCATCGGACATTTTTCATCTGCCGATGTTGTTTCATCTCCTCCTTCGAGCCGACAGAAATCTGTCCCCGCGGATTGCTAAATCTTTTTGTCTGGAACCTAATCCTTCAGGGAAGATCAGTTCCTTGGATAACCTGAACGTCCTGTCGTCACCTCCCATCTTTCTTCAGACATTTGAAGTGTTGCCACCTATTGGCGTCTATTCAAGACTTCCTGAGTGGATCCAACAACTCCGCAAACTCCGCATTCTGAAAATTGCGATCAGACAATTGATGAGGAATGATATTGATATTCTTTCAGGATTGCCTGTGCTCACTGCTGTCTCGCTGCATATTCGGCAATCCATGGAAGAAATCATTGTCTTCCACCGCGAGTCATTCCCAGCTCTCGACTGTTTGAAGCTATCATGTAGTGTACTGTACCTCACTTTTCAGGAAGAAGCAATGCCGAATCTTCGGAGGCTGAAGCTAGGATTCAATGCTCACAGAAGAGAGTTCTTTTACGTCAATATGCTTTCTGGCATTGAGCACCTGAAAACCCTGCAGGAGGTAGTAGGACAAATTGGTTTAGGCTTTGGTGCAGGGGAATCGGAGTGGGCAGCTGCAGAGTATGCATTCAAGAACGCCTTTAGCAGGCATTCAAACTTAACAAGCTTCAATATACGAAGAGTTGGTGGTGTTGATGAAGAGTAAGGGTCTTTTTCTTTTCTCTAATAGAACATTCAGTAATAGAGAAATAATTATTTCCTGTTCCTACTTCTTTTTTCAACCTATAGAAATAATTATTTCCTGTTCATACTTCTTTTTTCAACCTATTAAAAGGTAGAGATATTACTGAATGCGTTTAAATCCGATCTGGCGTGCAAAATACATAGTATAAAGTTTACGGTGGTCCCTACTGGTAGTAGTACTCTATTATTAATATTATCATCAGCAAAAATAATCTTAATAGTTGATTTATAATTTCTACTGTTAATAGAAAATTTTATTTTGCAACCAATAGTTGAGGCGATAGCATAGATAGATATGATGTATTAGATTATAAAATATGAACGATCTAAATTGATTCTATTAACATTCTTATTATTATTGCTTACTGTGAATTAGTGGGGTCCTACCTCTCACTTTCTTTCGTTTTTCACAATTACTCATTTTTCTTAGCATTGTTTTCGGTGTTGATGACATTTCTTCTTCCTTCTCATAATTAATTTTTTTTCTTATAAATTGTGTTGACATTGCATTCCCTTAATATAGGCGCTCTGGTGAGGAGTTGTTGCTGACAAGCACCTTGTGAGTAATCTAGCTTCTGTCTGCTAGTTCATTTATGAATTCTACAACTACTTGGTCACATAATCTAGAGAGCATTTCCACTGCTTGAGGGAGCTGAAATTTTACTAGCCGCATGCCCGCATCTACTCTAAGGATCAATAATCTCTAGCTCCCTCAAGCAGGGTCACAATATATATCTATGTTCTTATGTTCTGCGTTTGAGCAATATCTCGTGCAACACAATTGCTTACTCAACCTTTCTTTAATTTTTAACACATTATTATCTATTAAACATCCAAGTCCAACATTCATCTGCATGTACTGCAAAGTTGAACAACTAAGGCATAGTTCTGAATAGCTTAAGGGCTTACCTACTCCCTCATTTTTAGCGAGCATGTTTTCAGGCCGCTAAACAGTACATCTATCTATCTATTATATACTAAATGTCCATTAATCTTCCTACAAACGCTTCTAAACCGCCACGTGGTGTTCCTATAAACGCTCTTAGGTTGCCACGTGGCATTTATAATCTCACCGTCGATTTTCATTTAAATTGGTGAACCCATTATCTAGACCATTAGGTTAGATCTCTTTGCTTCCTCTTGATATCATATCATGTGTATACGAGTGAACTGTTTATACCAGAAAATCCTAGTTACCTACGCACAATGGAAAAAGAAGGAAAAATCTGACGTACGTACGCACAGTTGAAAAAAAAAACTTTTGGTACTGTTCATTTAAAAAAACGTACGTATGTACGATAGAAAACTATTAAAAGGTACTGTTTACTTTAAAAAAAATACGGACTTATATATGCAAGTAAAAAAGAAAAGCTATAAGATCAGAAAAATATATGTACGTGGGTAGAAAAAATAGATGGTTTTTAAAATAGTGTTTTCTATTGTAGAAAAACAAAATTTATTCATCCACAAATATGGTAAAAAATGTAGAATAAAAAATACATGATGTAAACATATATGATTTCAGTTGCACTACAGTAAAAAATATATGTTTTTAGCACACAGGCATTCTTCTTATTGGTGAGGCTTTAAAAAGTCGATCTAACAATATATCACTTTCTATTTTATTAAGGAATGCCTGTGAAGTGGTACAGGATGACATAATACATAGTCACTTTCTTTTTATAATTTTTCATATATGTTTGAATGACATGCAAAGGATAATAAATAGAACTTAGAAGAATATACATTTTACGAGTGAAGTAGAAAACATACGTCATAAATTCTAATTGTCCAAATAGATAAAAGAAATGAACGCATGATTTAAAAGTAAAAATTATGATGATCTAAAATATATATGATTTAAAAGTAAAAATTATGATGATCTAAAATATATTGTTACAAATAAATATACATAATTTAGAAGGTTGTGGTTATTTAAAATTTATTGTTGCAAATATTTTCATAAAGAGAAAAAGGGAGAAAAAGTAATCAAGAGGATAAACTTCCTACAAACGCTTCTAATCCATCACATAGTACCCTATAAACGCTTCTAAACCTCTATGTGGCGCTCTAGTTAATCATAGAAATTATAAGAAAAAAAAACATCCGAACATCTCACGTCGTCATGCCACTACCGGACAATATACATGCATGTAGATACGTAGGTATTCCACCTTAAGAAAAAATGTATGTATTTACGGTACATACACGCGTCGGGTCCTACATCCTTTTTTTTTTCTTCTCATTTAGATTAGATGGAAAACCAAACTAATAATCAAAAAACATATTAACTATGCTTTAAGTTGTAAAAATATATGCTATTTTGAATTGTATTCAAATTAGGCGCATGTCATCGAAACAAAAAATGAATTGCCCGTGCATCTGCACTGACTTCCTTCCTAGTTTACTTATAAAAGTTTCTTTAAAAAATCAAATAAATTAATCTTTTAATTTTGTAATAGTTAATACTCAAATAGTGATACACTAATGTCTTGCCCCGTTTCACGTGCAAGTGAAAAGCTCTAGCCAACTTGGTATTTATTAATTTTTATTTTATAATTTACTAAATCGTGGAAATATTATAAGCCAACTTGGTATTTATTAATTTTTATTTTATAATTTACTAAATCATGGAAATATTATAATTGAGATTTCAAACTGAGCACTACTTGGCATTACTATATTTGAATTTTACAATTATTAATTCGCTGAAAAACTAATTGATACTGAGACTATGTATTTCAAAATTTATTAATTTACTGTTCCCTCTGGTTTCATAATTCTTGACGTTTTAGACAAGGTTATGGTCAAACTTTAGAACTTTGGCTATCAATAAGTCTCAAAATATTAAGTTTGGAGATAATAGAATAACATGTATAAATTGGTCTTAAAAGGTACTATAATAAAAGTAAGTATTTATTTATTTATTGCATATATTATAATAGAAAATTATAGTTAAGATATGTTTTGAAAACCATATTATTGTTCAAAACATCAACAATTATGGAACCTAAGGGAGTACTAAATTTTATTAATTCCTAAATTTAGATTTATTAAATAAAGATAATGATTTAATTCGAACTCCAAATGGAGTATAAATAATTTGGTACGTATTAATTCAGATTTTGAATTATGAAATCATCAAAAAATAAAGTAAAGACTCTAAAGCCAATTACAACTAAATAGCATTTATTTATTTTGAATTCAGTAATTGTTGTGTGGTGAATATTTTGGCCATAGAATATAAGGATGCATATGATTTTATTTATATTAATGTGAGAATTGCTTACTTCTTCTCTTAATGAAGGAAATGCTAGGTAATTTCTCGTCTACTCATTCATTATGTGACAAAACCAATGAACATGCAACCAATAAGTACTAAAATGACTTCTTGAGTTTCGATAAAAAAAATTAATATAGCACATAGTGCCTACAAATAGGACTTAGACTTTTGGAAAACCAAAGAATGAAATAGGACTTAGACTTTTGGAAGGAGGGAGTAAAAAAAATGTATGGAGTAGGATAATAATAATGTGGACACTTCTATATGAGAGCTTCAAATTAGTATGAAGAAAGATTTCTGATACAATAACAAGATTATTAATTTCTATGGTATTATGGAACGTTGAGAGTGGCCTTGTATATGCAAGAACTATAAATCCTCAAGAAGATCCTAGAGTCTTAGACCAATCGTAAGTCAAATGCGAGATTTAATTTTGCAGAAATCTTGAAGAGTTGTTTGGATCCCAAGAGAAGTGAAATGTTTGTCTGACAAGTTAGCAAGAGAAGCTAGAAGTCATCAGATGGACTCTCCTGTTTATGACTGTCAAATTATAACACATATAGCTTATCCTGGAAGCTCATGCTATTCCTCGGCTGAAAGACTGTTTCAGTGAAACTAATTGCACAATAAACCAATTTTTAACCTTAAATTTGGAGCTGATTTTGGGATTTTTTTTATCGAAGTTTATTTTTCAACCTTTGCTTTTAGATCGCTAAGAACATGTATATAAAAATTTTATTCACAAATTACTTTTCGTTTGCAAATGTCATTTGCCATTTGGGTTATACACTTAAGTCAACTATAAAATAATTGACTCGGTTATCTAAAGATGAATTAAGTGCAAAGCCTTATTAATTACCTCTCTTTTATTGTCTCCTGTAAAGTTTTATTTATATCGTGCTTTAACTTTTGATTGAAGATTAATTTCTTGATGCTTTGCAGTAACTGGGAACCCCAAATTTTGGATCAGACAGAAAGCTCTTCACTTTCCTTGTCTGCTCCAGGAGTAAGTAGCCTTGAAAAGTTCATATTTACTAAAACAGAATTTAGTCAGTTCCCGGGATGTGTAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGTAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGACGGAAAGCTCTTCACTTTCGTTGTTATTGGGAGTAAGAAACCCCGGAAAGTGCGTAGTTGATACAGAATCCAACCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAGCTCTTCACTTTCGTTGTTATTGGGAGTAAGAAACCCTGAAAAGTGCGCAGTTGATGCAGAATCCAGTCAGTTTCCAAGATGTGTAGATGGGTCGGATCAGAAGGAAAGCTCCTCGCATTCCCTGTGCGCTTCGGTAGTAAGCGATGCTTCAGAAATGCTCGCAGCTAACACTGTAAAATCCAGTGGTGGAAGTGTGGCGGGTGCAAGTGGTAGCGGGAAATGCAAGAAACAAGGCTGCGAGGAGAAAGCCGGAGGAAAAACCATCTTCTGCAGGGCCCATGGCGGAGGCAAGAGGTGCTACTATCCTGGCTGTACAAAGAGCGCCGAAGAGCACACAGACTTCTGCTTAGCTCATATTAGTCGCCGCTGCATGCACGAGGGTTGTTTCCGGTTTGCACGCCGGAAAACTGACTTCTGCAGCAAGCATGGAGGCGGCAAAAAGGGTGAGACTGAGACCCATAAGAAGTCGTCCAGGAGTGCAGAATCTCGCTCTGGAGCCACCATCACTCACGTGAGTTCAGGTAAAAATTGCAAGTCTCCAGGATGCACAGGAACCGCAGACGGAGTCACCATGCTCTGCGAGAAGCATCGCATGAAAATGGCCTGCTCATTTCCAGGCTGCACCAAGATGGCATGGGGGCCGAGTGCACACTGTGTACGCCACGGAGCCGGCAAGAGATGTAAGTTTCTGGGCTGCACCAAGAGCACAAGGCGAAGCACCGATTTCTGCAAGACGCACGGTGGATCAGGAGGTGCAGATGATACTCTGTGCTCATGGCGAGGAGGGGAATCAAGCGTTGGTGGTGGCGAGGACAAGTGTGATAGAATTGCTCGGGGAAGGTCTGGTCTATGTGCAGCTCACAGCGCTCTTGTCCTGGACGACCGTGCTTCCTGCGATGGCACAATAGCCCCAGCAGCCGCCCAGCTGGTCCAGGCAGATGAACTCATCAAACCCGATGTGATAGAACACCCTGCCGTGGAGGCAGGTCGCGATGACAAAGCTGATGGTGGTGTTGGAGGATCAGGATCAGCAGCGGCTGTGGCTGACCAAAGACTAGATTTGAATGCCGAGGCGATTATTACACAACATTTCTTTGTTTGAGGGGAAAAAAAAAACAGGAAAGCTAGTCCTGTGTTGATTTATTTGTTGTAAGCGCCAATGTAGTTCATTACTTAGTACTGCTGGTAATTAATTCATGTACTTTTGTATATATAAGAGAGTAGTGCAATTGGGACTGGGGGCGGTTGGGTTGAAA

More
CDS seq

ATGGATGCTCCGGTACTTAGTTCTTCGCTTGCCCTTGGTGCCATGAGTCCCCTGCTCGGTAAGCTCGATGAACTCCTTGCTAGTACGGAGCACACGGCACCGAGCATCCAGCAAATCAGAGCCAATCTTGGCATCACAAGCACACGCCTGGTCGAGCTCTCCATGTTGCAAGATCCTCCCCTCGTGGCCAAGTACTGGATGAAGGATGCGCGCGAGCTGTCCTATGACATGGAGGACTGCCTCGACCTCGACCAGGTCGCCGGCGGCGGCGAGGAGGCGGATTGGATCGATCGCATCGCTGGGTTCAGATCTCGCGTGGAGGAGGCCAATAGACGGTACGAGAGGTACAATCTTGATTCCATCCTTGGCTCCTCCACAAACATTCCAATCGACCACCGCCTTAAGCCGGCCGTCGGGAAGCCGGCGATGGAGCATGTTGGTATGGAAGGGCCGATGGATGAGCTCCGCCGGTGGCTGACCGACGAGGCGCAGGAGCTCAAGGTGGTATCTATCGTCGGCGTTGGAGGGGTGGGTAAGAGCACGTTTGCGCAGAAACTATGGCGGAAACTTGGTGGACAATTCGATTGCCGGGCTTTTGTGCACACGGCCAAGAAGCCTGACATGAGGAGGATTTTGAGGAGCATACTCTCTCAAGTTCGTCCGCGACAACAGCCCGAGGTTTGTGAGGTGCATAACCTCTTAGAAGATCTCAGAAAACATCTACTAGATAAGAGGTACTTCATTATAGTGGAAGATTTATGGGATACATCAGTATGGGATGTTGTTAGCCGTGCTTTTCCAAAGGGTAATTGTGGTAGCAGAATAGTAACAACGACAAAATTTGAGGAAGTTGCTCTGACTTCTTGTGGTTATCACTCTAAGTACGTATTTAAGATAAAACCTCTTAGTGAGGATCTCTCGAAGGAATTGATTGTCAGAAGAGTTTTTGTATCCGGCAAAGGATGTCCTCAACAATGCAGTGCCATTTTAGATGAGATTACAAACAAATGTGGCGGTTTACCACTAGCTCTAAACATCATCGCCAGTCTTCTATCTTGCCAACATGAAGTATTAGAGCACTGGAAACATGCAAGGGATTTTTTATGCAACAGTTTGAGGACAAATCCAACTTTTGATGAGATTCTGAAACAAGTAGTAAACCTTTGCTACAATAGTCTTCCCCATTGTTTGAAGACATGTCTACTTTATTTTAGCATATATCCAGAGAATTACACAGTTATGAAGGAAGATTTGGTGAAGCAGTGGGCAGCTGAAGGTTTTCTCTGTGCAACAAAAGGAGAAGAAATTATGGCAGTTGCAGTGAGCTGTTTTGACAGGCTTGTCAATTTAGGATTGATTCAACCTATTGATATCAATTATAATGATAAGGTGGTGCACTATGCAGTGAATAACATGGTACTTGATATTATTACTTATAAGTCCATAGAAGAAAATTTTATCACTGTAATGGATAAGGATTGTTATCAGATGAGTATAGAACTTTCTGACAAGGTTCGCCGACTGTCGCTCCACTTTGGCAGTGCAACATATGCAACTATACCAGCAGGTATTGGACTATCCCAAGTTCGATCACTTACCTTTATTGGTTTGTTCAATTGCCTGCCTTCCATTGTGAAATTTAAGCTTGTCCGAGTTGTGATCCTTCATTTTTTGGGTGATCATGGAAACTTGAGTTTGAATCTCAGAAAACTAGGTGAACTGTCTCAGTTGAAGTATCTGCAGATAAAATGTAATGTCACCGTGGAGCTACCATATCAGATGCAAGGGCTAAAACATTTGGAAGCATTGGAAATAAGAGCAAGAACAGTGTCTATTCCATCGGACATTTTTCATCTGCCGATGTTGTTTCATCTCCTCCTTCGAGCCGACAGAAATCTGTCCCCGCGGATTGCTAAATCTTTTTGTCTGGAACCTAATCCTTCAGGGAAGATCAGTTCCTTGGATAACCTGAACGTCCTGTCGTCACCTCCCATCTTTCTTCAGACATTTGAAGTGTTGCCACCTATTGGCGTCTATTCAAGACTTCCTGAGTGGATCCAACAACTCCGCAAACTCCGCATTCTGAAAATTGCGATCAGACAATTGATGAGGAATGATATTGATATTCTTTCAGGATTGCCTGTGCTCACTGCTGTCTCGCTGCATATTCGGCAATCCATGGAAGAAATCATTGTCTTCCACCGCGAGTCATTCCCAGCTCTCGACTGTTTGAAGCTATCATGTAGTGTACTGTACCTCACTTTTCAGGAAGAAGCAATGCCGAATCTTCGGAGGCTGAAGCTAGGATTCAATGCTCACAGAAGAGAGTTCTTTTACGTCAATATGCTTTCTGGCATTGAGCACCTGAAAACCCTGCAGGAGGTAGTAGGACAAATTGGTTTAGGCTTTGGTGCAGGGGAATCGGAGTGGGCAGCTGCAGAGTATGCATTCAAGAACGCCTTTAGCAGGCATTCAAACTTAACAAGCTTCAATATACGAAGAGTTGGTGGTGTTGATGAAGATAACTGGGAACCCCAAATTTTGGATCAGACAGAAAGCTCTTCACTTTCCTTGTCTGCTCCAGGAGTAAGTAGCCTTGAAAAGTTCATATTTACTAAAACAGAATTTAGTCAGTTCCCGGGATGTGTAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGTAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGACGGAAAGCTCTTCACTTTCGTTGTTATTGGGAGTAAGAAACCCCGGAAAGTGCGTAGTTGATACAGAATCCAACCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAGCTCTTCACTTTCGTTGTTATTGGGAGTAAGAAACCCTGAAAAGTGCGCAGTTGATGCAGAATCCAGTCAGTTTCCAAGATGTGTAGATGGGTCGGATCAGAAGGAAAGCTCCTCGCATTCCCTGTGCGCTTCGGTAGTAAGCGATGCTTCAGAAATGCTCGCAGCTAACACTGTAAAATCCAGTGGTGGAAGTGTGGCGGGTGCAAGTGGTAGCGGGAAATGCAAGAAACAAGGCTGCGAGGAGAAAGCCGGAGGAAAAACCATCTTCTGCAGGGCCCATGGCGGAGGCAAGAGGTGCTACTATCCTGGCTGTACAAAGAGCGCCGAAGAGCACACAGACTTCTGCTTAGCTCATATTAGTCGCCGCTGCATGCACGAGGGTTGTTTCCGGTTTGCACGCCGGAAAACTGACTTCTGCAGCAAGCATGGAGGCGGCAAAAAGGGTGAGACTGAGACCCATAAGAAGTCGTCCAGGAGTGCAGAATCTCGCTCTGGAGCCACCATCACTCACGTGAGTTCAGGTAAAAATTGCAAGTCTCCAGGATGCACAGGAACCGCAGACGGAGTCACCATGCTCTGCGAGAAGCATCGCATGAAAATGGCCTGCTCATTTCCAGGCTGCACCAAGATGGCATGGGGGCCGAGTGCACACTGTGTACGCCACGGAGCCGGCAAGAGATGTAAGTTTCTGGGCTGCACCAAGAGCACAAGGCGAAGCACCGATTTCTGCAAGACGCACGGTGGATCAGGAGGTGCAGATGATACTCTGTGCTCATGGCGAGGAGGGGAATCAAGCGTTGGTGGTGGCGAGGACAAGTGTGATAGAATTGCTCGGGGAAGGTCTGGTCTATGTGCAGCTCACAGCGCTCTTGTCCTGGACGACCGTGCTTCCTGCGATGGCACAATAGCCCCAGCAGCCGCCCAGCTGGTCCAGGCAGATGAACTCATCAAACCCGATGTGATAGAACACCCTGCCGTGGAGGCAGGTCGCGATGACAAAGCTGATGGTGGTGTTGGAGGATCAGGATCAGCAGCGGCTGTGGCTGACCAAAGACTAGATTTGAATGCCGAGGCGATTATTACACAACATTTCTTTGTTTGA

More
Protein seq

MDAPVLSSSLALGAMSPLLGKLDELLASTEHTAPSIQQIRANLGITSTRLVELSMLQDPPLVAKYWMKDARELSYDMEDCLDLDQVAGGGEEADWIDRIAGFRSRVEEANRRYERYNLDSILGSSTNIPIDHRLKPAVGKPAMEHVGMEGPMDELRRWLTDEAQELKVVSIVGVGGVGKSTFAQKLWRKLGGQFDCRAFVHTAKKPDMRRILRSILSQVRPRQQPEVCEVHNLLEDLRKHLLDKRYFIIVEDLWDTSVWDVVSRAFPKGNCGSRIVTTTKFEEVALTSCGYHSKYVFKIKPLSEDLSKELIVRRVFVSGKGCPQQCSAILDEITNKCGGLPLALNIIASLLSCQHEVLEHWKHARDFLCNSLRTNPTFDEILKQVVNLCYNSLPHCLKTCLLYFSIYPENYTVMKEDLVKQWAAEGFLCATKGEEIMAVAVSCFDRLVNLGLIQPIDINYNDKVVHYAVNNMVLDIITYKSIEENFITVMDKDCYQMSIELSDKVRRLSLHFGSATYATIPAGIGLSQVRSLTFIGLFNCLPSIVKFKLVRVVILHFLGDHGNLSLNLRKLGELSQLKYLQIKCNVTVELPYQMQGLKHLEALEIRARTVSIPSDIFHLPMLFHLLLRADRNLSPRIAKSFCLEPNPSGKISSLDNLNVLSSPPIFLQTFEVLPPIGVYSRLPEWIQQLRKLRILKIAIRQLMRNDIDILSGLPVLTAVSLHIRQSMEEIIVFHRESFPALDCLKLSCSVLYLTFQEEAMPNLRRLKLGFNAHRREFFYVNMLSGIEHLKTLQEVVGQIGLGFGAGESEWAAAEYAFKNAFSRHSNLTSFNIRRVGGVDEDNWEPQILDQTESSSLSLSAPGVSSLEKFIFTKTEFSQFPGCVDVSDQKENSSLSLSLGVRNPGKCAVDTESSQFPGCIDVSDQKENSSLSLSLGVRNPGKCVVDTESSQFPGCIDVSDQKENSSLSLSLGVRNPGKCAVDTESSQFPGCIDVSDQKENSSLSLSLGVRNPGKCAVDTESSQFPGCIDVSDQTESSSLSLLLGVRNPGKCVVDTESNQFPGCIDVSDQKESSSLSLLLGVRNPEKCAVDAESSQFPRCVDGSDQKESSSHSLCASVVSDASEMLAANTVKSSGGSVAGASGSGKCKKQGCEEKAGGKTIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCSKHGGGKKGETETHKKSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAHSALVLDDRASCDGTIAPAAAQLVQADELIKPDVIEHPAVEAGRDDKADGGVGGSGSAAAVADQRLDLNAEAIITQHFFV

Function Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_11g0007780 OsAzu_11g0007780.01 Chr11 6533629 6542838 + NAM
CDS seq

ATGGATGCTCCGGTACTTAGTTCTTCGCTTGCCCTTGGTGCCATGAGTCCCCTGCTCGGTAAGCTCGATGAACTCCTTGCTAGTACGGAGCACACGGCACCGAGCATCCAGCAAATCAGAGCCAATCTTGGCATCACAAGCACACGCCTGGTCGAGCTCTCCATGTTGCAAGATCCTCCCCTCGTGGCCAAGTACTGGATGAAGGATGCGCGCGAGCTGTCCTATGACATGGAGGACTGCCTCGACCTCGACCAGGTCGCCGGCGGCGGCGAGGAGGCGGATTGGATCGATCGCATCGCTGGGTTCAGATCTCGCGTGGAGGAGGCCAATAGACGGTACGAGAGGTACAATCTTGATTCCATCCTTGGCTCCTCCACAAACATTCCAATCGACCACCGCCTTAAGCCGGCCGTCGGGAAGCCGGCGATGGAGCATGTTGGTATGGAAGGGCCGATGGATGAGCTCCGCCGGTGGCTGACCGACGAGGCGCAGGAGCTCAAGGTGGTATCTATCGTCGGCGTTGGAGGGGTGGGTAAGAGCACGTTTGCGCAGAAACTATGGCGGAAACTTGGTGGACAATTCGATTGCCGGGCTTTTGTGCACACGGCCAAGAAGCCTGACATGAGGAGGATTTTGAGGAGCATACTCTCTCAAGTTCGTCCGCGACAACAGCCCGAGGTTTGTGAGGTGCATAACCTCTTAGAAGATCTCAGAAAACATCTACTAGATAAGAGGTACTTCATTATAGTGGAAGATTTATGGGATACATCAGTATGGGATGTTGTTAGCCGTGCTTTTCCAAAGGGTAATTGTGGTAGCAGAATAGTAACAACGACAAAATTTGAGGAAGTTGCTCTGACTTCTTGTGGTTATCACTCTAAGTACGTATTTAAGATAAAACCTCTTAGTGAGGATCTCTCGAAGGAATTGATTGTCAGAAGAGTTTTTGTATCCGGCAAAGGATGTCCTCAACAATGCAGTGCCATTTTAGATGAGATTACAAACAAATGTGGCGGTTTACCACTAGCTCTAAACATCATCGCCAGTCTTCTATCTTGCCAACATGAAGTATTAGAGCACTGGAAACATGCAAGGGATTTTTTATGCAACAGTTTGAGGACAAATCCAACTTTTGATGAGATTCTGAAACAAGTAGTAAACCTTTGCTACAATAGTCTTCCCCATTGTTTGAAGACATGTCTACTTTATTTTAGCATATATCCAGAGAATTACACAGTTATGAAGGAAGATTTGGTGAAGCAGTGGGCAGCTGAAGGTTTTCTCTGTGCAACAAAAGGAGAAGAAATTATGGCAGTTGCAGTGAGCTGTTTTGACAGGCTTGTCAATTTAGGATTGATTCAACCTATTGATATCAATTATAATGATAAGGTGGTGCACTATGCAGTGAATAACATGGTACTTGATATTATTACTTATAAGTCCATAGAAGAAAATTTTATCACTGTAATGGATAAGGATTGTTATCAGATGAGTATAGAACTTTCTGACAAGGTTCGCCGACTGTCGCTCCACTTTGGCAGTGCAACATATGCAACTATACCAGCAGGTATTGGACTATCCCAAGTTCGATCACTTACCTTTATTGGTTTGTTCAATTGCCTGCCTTCCATTGTGAAATTTAAGCTTGTCCGAGTTGTGATCCTTCATTTTTTGGGTGATCATGGAAACTTGAGTTTGAATCTCAGAAAACTAGGTGAACTGTCTCAGTTGAAGTATCTGCAGATAAAATGTAATGTCACCGTGGAGCTACCATATCAGATGCAAGGGCTAAAACATTTGGAAGCATTGGAAATAAGAGCAAGAACAGTGTCTATTCCATCGGACATTTTTCATCTGCCGATGTTGTTTCATCTCCTCCTTCGAGCCGACAGAAATCTGTCCCCGCGGATTGCTAAATCTTTTTGTCTGGAACCTAATCCTTCAGGGAAGATCAGTTCCTTGGATAACCTGAACGTCCTGTCGTCACCTCCCATCTTTCTTCAGACATTTGAAGTGTTGCCACCTATTGGCGTCTATTCAAGACTTCCTGAGTGGATCCAACAACTCCGCAAACTCCGCATTCTGAAAATTGCGATCAGACAATTGATGAGGAATGATATTGATATTCTTTCAGGATTGCCTGTGCTCACTGCTGTCTCGCTGCATATTCGGCAATCCATGGAAGAAATCATTGTCTTCCACCGCGAGTCATTCCCAGCTCTCGACTGTTTGAAGCTATCATGTAGTGTACTGTACCTCACTTTTCAGGAAGAAGCAATGCCGAATCTTCGGAGGCTGAAGCTAGGATTCAATGCTCACAGAAGAGAGTTCTTTTACGTCAATATGCTTTCTGGCATTGAGCACCTGAAAACCCTGCAGGAGGTAGTAGGACAAATTGGTTTAGGCTTTGGTGCAGGGGAATCGGAGTGGGCAGCTGCAGAGTATGCATTCAAGAACGCCTTTAGCAGGCATTCAAACTTAACAAGCTTCAATATACGAAGAGTTGGTGGTGTTGATGAAGATAACTGGGAACCCCAAATTTTGGATCAGACAGAAAGCTCTTCACTTTCCTTGTCTGCTCCAGGAGTAAGTAGCCTTGAAAAGTTCATATTTACTAAAACAGAATTTAGTCAGTTCCCGGGATGTGTAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGTAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAACTCTTCACTTTCATTGTCCTTGGGAGTAAGAAACCCTGGAAAGTGCGCAGTTGATACAGAATCCAGTCAGTTCCCAGGATGTATAGATGTGTCGGATCAGACGGAAAGCTCTTCACTTTCGTTGTTATTGGGAGTAAGAAACCCCGGAAAGTGCGTAGTTGATACAGAATCCAACCAGTTCCCAGGATGTATAGATGTGTCGGATCAGAAAGAAAGCTCTTCACTTTCGTTGTTATTGGGAGTAAGAAACCCTGAAAAGTGCGCAGTTGATGCAGAATCCAGTCAGTTTCCAAGATGTGTAGATGGGTCGGATCAGAAGGAAAGCTCCTCGCATTCCCTGTGCGCTTCGGTAGTAAGCGATGCTTCAGAAATGCTCGCAGCTAACACTGTAAAATCCAGTGGTGGAAGTGTGGCGGGTGCAAGTGGTAGCGGGAAATGCAAGAAACAAGGCTGCGAGGAGAAAGCCGGAGGAAAAACCATCTTCTGCAGGGCCCATGGCGGAGGCAAGAGGTGCTACTATCCTGGCTGTACAAAGAGCGCCGAAGAGCACACAGACTTCTGCTTAGCTCATATTAGTCGCCGCTGCATGCACGAGGGTTGTTTCCGGTTTGCACGCCGGAAAACTGACTTCTGCAGCAAGCATGGAGGCGGCAAAAAGGGTGAGACTGAGACCCATAAGAAGTCGTCCAGGAGTGCAGAATCTCGCTCTGGAGCCACCATCACTCACGTGAGTTCAGGTAAAAATTGCAAGTCTCCAGGATGCACAGGAACCGCAGACGGAGTCACCATGCTCTGCGAGAAGCATCGCATGAAAATGGCCTGCTCATTTCCAGGCTGCACCAAGATGGCATGGGGGCCGAGTGCACACTGTGTACGCCACGGAGCCGGCAAGAGATGTAAGTTTCTGGGCTGCACCAAGAGCACAAGGCGAAGCACCGATTTCTGCAAGACGCACGGTGGATCAGGAGGTGCAGATGATACTCTGTGCTCATGGCGAGGAGGGGAATCAAGCGTTGGTGGTGGCGAGGACAAGTGTGATAGAATTGCTCGGGGAAGGTCTGGTCTATGTGCAGCTCACAGCGCTCTTGTCCTGGACGACCGTGCTTCCTGCGATGGCACAATAGCCCCAGCAGCCGCCCAGCTGGTCCAGGCAGATGAACTCATCAAACCCGATGTGATAGAACACCCTGCCGTGGAGGCAGGTCGCGATGACAAAGCTGATGGTGGTGTTGGAGGATCAGGATCAGCAGCGGCTGTGGCTGACCAAAGACTAGATTTGAATGCCGAGGCGATTATTACACAACATTTCTTTGTTTGA

More
Protein seq

MDAPVLSSSLALGAMSPLLGKLDELLASTEHTAPSIQQIRANLGITSTRLVELSMLQDPPLVAKYWMKDARELSYDMEDCLDLDQVAGGGEEADWIDRIAGFRSRVEEANRRYERYNLDSILGSSTNIPIDHRLKPAVGKPAMEHVGMEGPMDELRRWLTDEAQELKVVSIVGVGGVGKSTFAQKLWRKLGGQFDCRAFVHTAKKPDMRRILRSILSQVRPRQQPEVCEVHNLLEDLRKHLLDKRYFIIVEDLWDTSVWDVVSRAFPKGNCGSRIVTTTKFEEVALTSCGYHSKYVFKIKPLSEDLSKELIVRRVFVSGKGCPQQCSAILDEITNKCGGLPLALNIIASLLSCQHEVLEHWKHARDFLCNSLRTNPTFDEILKQVVNLCYNSLPHCLKTCLLYFSIYPENYTVMKEDLVKQWAAEGFLCATKGEEIMAVAVSCFDRLVNLGLIQPIDINYNDKVVHYAVNNMVLDIITYKSIEENFITVMDKDCYQMSIELSDKVRRLSLHFGSATYATIPAGIGLSQVRSLTFIGLFNCLPSIVKFKLVRVVILHFLGDHGNLSLNLRKLGELSQLKYLQIKCNVTVELPYQMQGLKHLEALEIRARTVSIPSDIFHLPMLFHLLLRADRNLSPRIAKSFCLEPNPSGKISSLDNLNVLSSPPIFLQTFEVLPPIGVYSRLPEWIQQLRKLRILKIAIRQLMRNDIDILSGLPVLTAVSLHIRQSMEEIIVFHRESFPALDCLKLSCSVLYLTFQEEAMPNLRRLKLGFNAHRREFFYVNMLSGIEHLKTLQEVVGQIGLGFGAGESEWAAAEYAFKNAFSRHSNLTSFNIRRVGGVDEDNWEPQILDQTESSSLSLSAPGVSSLEKFIFTKTEFSQFPGCVDVSDQKENSSLSLSLGVRNPGKCAVDTESSQFPGCIDVSDQKENSSLSLSLGVRNPGKCVVDTESSQFPGCIDVSDQKENSSLSLSLGVRNPGKCAVDTESSQFPGCIDVSDQKENSSLSLSLGVRNPGKCAVDTESSQFPGCIDVSDQTESSSLSLLLGVRNPGKCVVDTESNQFPGCIDVSDQKESSSLSLLLGVRNPEKCAVDAESSQFPRCVDGSDQKESSSHSLCASVVSDASEMLAANTVKSSGGSVAGASGSGKCKKQGCEEKAGGKTIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCSKHGGGKKGETETHKKSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAHSALVLDDRASCDGTIAPAAAQLVQADELIKPDVIEHPAVEAGRDDKADGGVGGSGSAAAVADQRLDLNAEAIITQHFFV

More
Gene Transcript Chromosome Start End Strand Source
OsAzu_11g0007780 OsAzu_11g0007780.02 Chr11 6533569 6542794 + IsoSeq
CDS seq

ATGCGCGCGAGCTGTCCTATGACATGGAGGACTGCCTCGACCTCGACCAGGTCGCCGGCGGCGGCGAGGAGGCGGATTGGATCGATCGCATCGCTGGGTTCAGATCTCGCGTGGAGGAGGCCAATAGACGGTACGAGAGGTACAATCTTGATTCCATCCTTGGCTCCTCCACAAACATTCCAATCGACCACCGCCTTAAGCCGGCCGTCGGGAAGCCGGCGATGGAGCATGTTGGTATGGAAGGGCCGATGGATGAGCTCCGCCGGT

More
Protein seq

MRASCPMTWRTASTSTRSPAAARRRIGSIASLGSDLAWRRPIDGTRGTILIPSLAPPQTFQSTTALSRPSGSRRWSMLVWKGRWMSSAG

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr11 6536625 6540893 + OsAzu_11g0007780.02 OsAzu_11g0007780.02,OsAzu_11g0007780.01 All

Expression

Leaf Root Panicle
FPKM 0.586193 4.042774 1.698145

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0223201 RBH 1.687086 0.982674 2.311912
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g11580 RBH 1.219142 1.126729 0.523316
Nipponbare | IRGSP 1.0 | RAP-db Os11g0223201 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0008050 RBH 0.000000 10.068645 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0020060 SBH 0.403046 0.503076 7.053586
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0007680 RBH 0.728379 4.617134 2.073140
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0007750 SBH 0.266105 0.292467 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0007770 SBH 22.293795 17.082457 21.002594
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0104800 SBH 9.8728925 17.3811525 9.2154185
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0007760 SBH 1.028826 0.606468 2.400014
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0111000 SBH 11.163192 12.880398 7.240871
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0007930 SBH 0.395772 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0007910 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0007670 RBH 4.611819 5.378192 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0007850 SBH 0.619932 0.0 1.388970
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0007890 SBH 1.034561 7.104585 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G007940 SBH 0.421739 2.155976 1.788703
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0008330 SBH 0.0 0.0 0.326098
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.