Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_11g0007910 | OGI:11020290 | 6/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr11:6788617-6790975 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATTCGCAGTTTATGACACCTGAATTCAAAGAATATCAGAGCAGAAAATGTTCCTTTTTTGAACACGATGCCTTTTGCAGTGGGTTCTTGGACATACAGTGAGAGAGCTGCAAGGGTACCCAATTCTGTCAGGATATACATGTCGCTATCCAGGAATTCCCTGATCACAATTTTCAAAATACGGAGTTCTCGAAAATGAGCAATCCACTCGGGAATTCCTGAAAAGATGCACTCAGATGGCAACAGCTCCAGTGTTTGAACGGGAGGAGAGGATGCGCTCGTTGAATCATGGAGGCTAGCTGTCGTGTGTGAGGTACTAGGATCCATACTGAGATTCTTGATGCCATCAGTAACTCCTGGTTGATTTGGCATACCTTGGAACTGGAGTGGTAAGAAACTGAGATGAAGAACATTCGATGGAACAACTGCGTCGTTTGCATTTATTTCCAGTGTCTGCAAGTGTTTAAAACTCTGCATCTGATCTGGCAGTTTCACTGTAACGCTACAATTGACCTGCATATATCTCAATAGAACCAGTTGATAAATTTCTGTGAGGTCTATCATGTTTCCATCTTCACACGAAAAATCAAGACATGCAACACGAAGAAGCTTAAACTCTTTAATTGAAGGCATGCAGTTAAATAGCCCAATAAATATAAAAGACCGAATTTCTGATAGCCCAATATTAACCGGTGTAGTAGCATATGTTGCACTGCCGAAGTGTAGGGACAATCGATGAACCTTGTAAGTAAGTCTTGCTGTCGTTTGAGAATAATCAATTGCAGTGACAAAATTCTCTTCCTGGGCCTTGCGTGTAATAAATTCATGTACAATATGGTGAACTGCATAGGTCAATACATCAGATTTATACTTGATATCCCTACATTGGATAAGTCCCAGACTGACAAGCTTATTGAAATAGCTCATCGCAACTTCCATGGCATTTTCCCGTGTTGATGAGCAGACAAAATCTTGGGCTATCCATTGATTCACCAAATCTTCCTTCAAAAGTATGTAGTTATCCGGATATACACTAAGATATAGCAAACATGTCTTCAAACAACAAGGAAGACTGTTGTAGCAAAGGTTCAGTACTTGCTTCAGTATCTCATCAGAAGTAGGATTTACCCTCAAATTATTGCACAAGAAATTTTCTACATATTGCCAGTACTTCAATCTATCTTCCAAGTTCTGTACTGTCTCATGTTGGATTGCTAGAAGACTGCCCATGATGATAATTGCTAGTGGTGAGCCACCGCATTTTCTTGCAATCTCTTGTGTGACTTTGTGGAATTGACCGGGATGCTCTCCAGAGCCAAAAGTTCTACTGATTAGCAACTTCTTCGACTCGTCGACACTAAGAGCTTTCATCTTGAATATGTACTGAGGGTTATAAACGCAACAAGCCAGAGCAACTTCATCAACTTTTGTGGTTGTTATTATTCTGCTCCCACAATTATTCACAGGAAAAGCATGTCTAACAACATCCCATACGGATGGAGCCCATAAATCATCAATTACAATAAAGTACCTGACAAATAATTTGGTCTGTATCAGACGTGTTTTGTCAAGCAAAAGAGAAAATATCCAAGAAAAATATCATGACAATGGATTTTTGTTCTAAAAAACAAAAAGAAGATTTGCAAACCTCCTGTTTTTTAGATGATTCTTGACATCGTCGATGAGGTTGGTCACAGCACAAGGGACGACTGGTTGGAGCGGCCGAACTTGAGAGAGTATATTCCTCAGAATCATCCTTATATCAGGCTTTTTGGCCGTCTGCACAAAAGCCCGGCACTCGAATTTTCCTTCAAGTTCACGCCATAGTAGTTCGGCAAGCTTGGTCTTACCGATTCCTTCCGCACCGAGAATGCATAACACCTTGAGATTTTCATCTTCGTCTTCAGCCATCCAACCACGCAGCTTGTTTCTCGGGCCATCCATGCCAACAGGGTCAACAACCTTGCTGAACACAGTTGGAAGATGATGATGTACAACCATGTTTGTGGGACTTGATCCAGCATCAGCATCAAGATTATAGATGCTCCATCGCTCATTCGCCTCCTTGACACGAGTCAAGAATCCTGAGATGGTGTCATCCCAACCCATCTTGGCACCGGCATCAGCGTTGACCAACAAGTCGATGCAGTCCTCCATGTCGTAGCAAAGCTCGCGCACATCCTTCATCCAGTAAATCACCGTGAGGGATGGATCTCGCACATTTGAAAGCTTCTCCAAACGATCTTGTATGACGCTAAGCTCAGATATGAGTTGATGGATAGTCGGGCTATCGAGCTTCTTCAACTTCTGTAGAAGGGAGCCCATGGCACCCAGCGAAGCGCTAATCGGAGCTTCCAT
More
|
||||||||||
| CDS seq | ATGGAAGCTCCGATTAGCGCTTCGCTGGGTGCCATGGGCTCCCTTCTACAGAAGTTGAAGAAGCTCGATAGCCCGACTATCCATCAACTCATATCTGAGCTTAGCGTCATACAAGATCGTTTGGAGAAGCTTTCAAATGTGCGAGATCCATCCCTCACGGTGATTTACTGGATGAAGGATGTGCGCGAGCTTTGCTACGACATGGAGGACTGCATCGACTTGTTGGTCAACGCTGATGCCGGTGCCAAGATGGGTTGGGATGACACCATCTCAGGATTCTTGACTCGTGTCAAGGAGGCGAATGAGCGATGGAGCATCTATAATCTTGATGCTGATGCTGGATCAAGTCCCACAAACATGGTTGTACATCATCATCTTCCAACTGTGTTCAGCAAGGTTGTTGACCCTGTTGGCATGGATGGCCCGAGAAACAAGCTGCGTGGTTGGATGGCTGAAGACGAAGATGAAAATCTCAAGGTGTTATGCATTCTCGGTGCGGAAGGAATCGGTAAGACCAAGCTTGCCGAACTACTATGGCGTGAACTTGAAGGAAAATTCGAGTGCCGGGCTTTTGTGCAGACGGCCAAAAAGCCTGATATAAGGATGATTCTGAGGAATATACTCTCTCAAGTTCGGCCGCTCCAACCAGTCGTCCCTTGTGCTGTGACCAACCTCATCGACGATGTCAAGAATCATCTAAAAAACAGGAGAATAATAACAACCACAAAAGTTGATGAAGTTGCTCTGGCTTGTTGCGTTTATAACCCTCAGTACATATTCAAGATGAAAGCTCTTAGTGTCGACGAGTCGAAGAAGTTGCTAATCAGTAGAACTTTTGGCTCTGGAGAGCATCCCGGTCAATTCCACAAAGTCACACAAGAGATTGCAAGAAAATGCGGTGGCTCACCACTAGCAATTATCATCATGGGCAGTCTTCTAGCAATCCAACATGAGACAGTACAGAACTTGGAAGATAGATTGAAGTACTGGCAATATGTAGAAAATTTCTTGTGCAATAATTTGAGGGTAAATCCTACTTCTGATGAGATACTGAAGCAAGTACTGAACCTTTGCTACAACAGTCTTCCTTGTTGTTTGAAGACATGTTTGCTATATCTTAGTGTATATCCGGATAACTACATACTTTTGAAGGAAGATTTGGTGAATCAATGGATAGCCCAAGATTTTGTCTGCTCATCAACACGGGAAAATGCCATGGAAGTTGCGATGAGCTATTTCAATAAGCTTGTCAGTCTGGGACTTATCCAATGTAGGGATATCAAGTATAAATCTGATGTATTGACCTATGCAGTTCACCATATTGTACATGAATTTATTACACGCAAGGCCCAGGAAGAGAATTTTGTCACTGCAATTGATTATTCTCAAACGACAGCAAGACTTACTTACAAGGTTCATCGATTGTCCCTACACTTCGGCAGTGCAACATATGCTACTACACCGGTTAATATTGGGCTATCAGAAATTCGGTCTTTTATATTTATTGGGCTATTTAACTGCATGCCTTCAATTAAAGAGTTTAAGCTTCTTCGTGTTGCATGTCTTGATTTTTCGTGTGAAGATGGAAACATGATAGACCTCACAGAAATTTATCAACTGGTTCTATTGAGATATATGCAGGTCAATTGTAGCGTTACAGTGAAACTGCCAGATCAGATGCAGAGTTTTAAACACTTGCAGACACTGGAAATAAATGCAAACGACGCAGTTGTTCCATCGAATGTTCTTCATCTCAGTTTCTTACCACTCCAGTTCCAAGGTGTCATAAACTGCGAATAG
More
|
||||||||||
| Protein seq | MEAPISASLGAMGSLLQKLKKLDSPTIHQLISELSVIQDRLEKLSNVRDPSLTVIYWMKDVRELCYDMEDCIDLLVNADAGAKMGWDDTISGFLTRVKEANERWSIYNLDADAGSSPTNMVVHHHLPTVFSKVVDPVGMDGPRNKLRGWMAEDEDENLKVLCILGAEGIGKTKLAELLWRELEGKFECRAFVQTAKKPDIRMILRNILSQVRPLQPVVPCAVTNLIDDVKNHLKNRRIITTTKVDEVALACCVYNPQYIFKMKALSVDESKKLLISRTFGSGEHPGQFHKVTQEIARKCGGSPLAIIIMGSLLAIQHETVQNLEDRLKYWQYVENFLCNNLRVNPTSDEILKQVLNLCYNSLPCCLKTCLLYLSVYPDNYILLKEDLVNQWIAQDFVCSSTRENAMEVAMSYFNKLVSLGLIQCRDIKYKSDVLTYAVHHIVHEFITRKAQEENFVTAIDYSQTTARLTYKVHRLSLHFGSATYATTPVNIGLSEIRSFIFIGLFNCMPSIKEFKLLRVACLDFSCEDGNMIDLTEIYQLVLLRYMQVNCSVTVKLPDQMQSFKHLQTLEINANDAVVPSNVLHLSFLPLQFQGVINCE |
||||||||||
| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_11g0007910 | OsKYG_11g0007910.01 | Chr11 | 6788617 | 6790975 | - | NAM | ||
| CDS seq | ATGGAAGCTCCGATTAGCGCTTCGCTGGGTGCCATGGGCTCCCTTCTACAGAAGTTGAAGAAGCTCGATAGCCCGACTATCCATCAACTCATATCTGAGCTTAGCGTCATACAAGATCGTTTGGAGAAGCTTTCAAATGTGCGAGATCCATCCCTCACGGTGATTTACTGGATGAAGGATGTGCGCGAGCTTTGCTACGACATGGAGGACTGCATCGACTTGTTGGTCAACGCTGATGCCGGTGCCAAGATGGGTTGGGATGACACCATCTCAGGATTCTTGACTCGTGTCAAGGAGGCGAATGAGCGATGGAGCATCTATAATCTTGATGCTGATGCTGGATCAAGTCCCACAAACATGGTTGTACATCATCATCTTCCAACTGTGTTCAGCAAGGTTGTTGACCCTGTTGGCATGGATGGCCCGAGAAACAAGCTGCGTGGTTGGATGGCTGAAGACGAAGATGAAAATCTCAAGGTGTTATGCATTCTCGGTGCGGAAGGAATCGGTAAGACCAAGCTTGCCGAACTACTATGGCGTGAACTTGAAGGAAAATTCGAGTGCCGGGCTTTTGTGCAGACGGCCAAAAAGCCTGATATAAGGATGATTCTGAGGAATATACTCTCTCAAGTTCGGCCGCTCCAACCAGTCGTCCCTTGTGCTGTGACCAACCTCATCGACGATGTCAAGAATCATCTAAAAAACAGGAGAATAATAACAACCACAAAAGTTGATGAAGTTGCTCTGGCTTGTTGCGTTTATAACCCTCAGTACATATTCAAGATGAAAGCTCTTAGTGTCGACGAGTCGAAGAAGTTGCTAATCAGTAGAACTTTTGGCTCTGGAGAGCATCCCGGTCAATTCCACAAAGTCACACAAGAGATTGCAAGAAAATGCGGTGGCTCACCACTAGCAATTATCATCATGGGCAGTCTTCTAGCAATCCAACATGAGACAGTACAGAACTTGGAAGATAGATTGAAGTACTGGCAATATGTAGAAAATTTCTTGTGCAATAATTTGAGGGTAAATCCTACTTCTGATGAGATACTGAAGCAAGTACTGAACCTTTGCTACAACAGTCTTCCTTGTTGTTTGAAGACATGTTTGCTATATCTTAGTGTATATCCGGATAACTACATACTTTTGAAGGAAGATTTGGTGAATCAATGGATAGCCCAAGATTTTGTCTGCTCATCAACACGGGAAAATGCCATGGAAGTTGCGATGAGCTATTTCAATAAGCTTGTCAGTCTGGGACTTATCCAATGTAGGGATATCAAGTATAAATCTGATGTATTGACCTATGCAGTTCACCATATTGTACATGAATTTATTACACGCAAGGCCCAGGAAGAGAATTTTGTCACTGCAATTGATTATTCTCAAACGACAGCAAGACTTACTTACAAGGTTCATCGATTGTCCCTACACTTCGGCAGTGCAACATATGCTACTACACCGGTTAATATTGGGCTATCAGAAATTCGGTCTTTTATATTTATTGGGCTATTTAACTGCATGCCTTCAATTAAAGAGTTTAAGCTTCTTCGTGTTGCATGTCTTGATTTTTCGTGTGAAGATGGAAACATGATAGACCTCACAGAAATTTATCAACTGGTTCTATTGAGATATATGCAGGTCAATTGTAGCGTTACAGTGAAACTGCCAGATCAGATGCAGAGTTTTAAACACTTGCAGACACTGGAAATAAATGCAAACGACGCAGTTGTTCCATCGAATGTTCTTCATCTCAGTTTCTTACCACTCCAGTTCCAAGGTGTCATAAACTGCGAATAG
More
|
|||||||
| Protein seq | MEAPISASLGAMGSLLQKLKKLDSPTIHQLISELSVIQDRLEKLSNVRDPSLTVIYWMKDVRELCYDMEDCIDLLVNADAGAKMGWDDTISGFLTRVKEANERWSIYNLDADAGSSPTNMVVHHHLPTVFSKVVDPVGMDGPRNKLRGWMAEDEDENLKVLCILGAEGIGKTKLAELLWRELEGKFECRAFVQTAKKPDIRMILRNILSQVRPLQPVVPCAVTNLIDDVKNHLKNRRIITTTKVDEVALACCVYNPQYIFKMKALSVDESKKLLISRTFGSGEHPGQFHKVTQEIARKCGGSPLAIIIMGSLLAIQHETVQNLEDRLKYWQYVENFLCNNLRVNPTSDEILKQVLNLCYNSLPCCLKTCLLYLSVYPDNYILLKEDLVNQWIAQDFVCSSTRENAMEVAMSYFNKLVSLGLIQCRDIKYKSDVLTYAVHHIVHEFITRKAQEENFVTAIDYSQTTARLTYKVHRLSLHFGSATYATTPVNIGLSEIRSFIFIGLFNCMPSIKEFKLLRVACLDFSCEDGNMIDLTEIYQLVLLRYMQVNCSVTVKLPDQMQSFKHLQTLEINANDAVVPSNVLHLSFLPLQFQGVINCE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0223201 | RBH | 1.687086 | 0.982674 | 2.311912 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11580 | RBH | 1.219142 | 1.126729 | 0.523316 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0223201 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008050 | SBH | 0.000000 | 10.068645 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007980 | SBH | 0.297682 | 4.919609 | 1.817719 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007680 | RBH | 0.728379 | 4.617134 | 2.073140 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007750 | SBH | 0.266105 | 0.292467 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007770 | SBH | 22.293795 | 17.082457 | 21.002594 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0104800 | SBH | 9.8728925 | 17.3811525 | 9.2154185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007760 | SBH | 1.028826 | 0.606468 | 2.400014 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0111000 | SBH | 11.163192 | 12.880398 | 7.240871 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007930 | SBH | 0.395772 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007930 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007670 | RBH | 4.611819 | 5.378192 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007850 | SBH | 0.619932 | 0.0 | 1.388970 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007890 | SBH | 1.034561 | 7.104585 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007940 | SBH | 0.421739 | 2.155976 | 1.788703 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007750 | SBH | 0.327408 | 12.925796 | 3.389852 |
