Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_10g0002570 OGI:10010270 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr10:3177152-3179458
Gene Symbol -
DNA seq

GATGTCACTTCTTTTGCATATGACTTTCACAAACAGTGGAAAGCCTAAGGACTATGATGTCTGTGAAGGAACCAACGGATGGCCATGCGGTAGATCCGGAAAAATCCTCTGAATCAAGTGTAGGAGTTTGTTCAAAGGAGCTATCTGCCAACCCATCCCCAACACGCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGACGGAGAGGAGAGGAGGAGGCAAGCTTGCAATCTCACAACCATCTATCGATTTCTCCCTTCCTTCTCTTTCTTCTTTCTTTCTTTCTTTCGTTTCCCCCTCTCACATGTCAGGTTATTTCTTCTCCTCATCCTCTCCGGATGATTTCACTTTTGCTCGAAATCTCTCATGTTGTTGTTGTGTTGAAGGCGGCGAAGGGGGAAACTTTGGTGGTGGTGGTGGCCGGAGAGGAGGATGGCGGCAGCGGTGGCGATGCCCGATGCGGAGCGGCAGCGGCAGTGACGGCGGCGGGTACGACAAGGCCGGGATGGACTCCGGCAAGTACGTGCAGCCGCCAGCAGTCGCCAACATCGAGCCCAAGCAGAAGATCAAGGTCTGGTTCCCAAAACAGAAGGTGAGCAAAAGCATGCAGGGATATACTATCAAACTGGTTTGCCTTTTGTGTGTGTGGCTGTGAAATGTTCTGGACAAATTGGTTGACAATGGAGCAATAGCAATAGTAGTGTTCAATTGTTTGCCTTGGTTGTGCATACTCTGCTTCAACTATATTTAGAAATTGCAAGTCTATGTATTTATTTGTTTTGCTTCCTTTCTTGCATAATGGAACAACCTTTATATAATCAAGGAAGTATACTGTACTTATCAGAGTATGTGCCAGATTAAGCCATCCATTAATTAGATGCTGAAGTAAACTATATGACTATATTGCGATGTATTCTAATTCCACTACTTACAAAACTGTAGGGTATAAGATTTGCTTATTTTTAGAAGATAGGCTAAACGAGGATCCTTTAGGTGACATGGCCAAACTAAGACACATATACATAACGTATTATCATGCATCTGATAGTAATGCAAAACAATGCAGTCCTATTTACTTTCACTGCAGGTATTTAGGCTCATCTTTTATTTTTCTCAAGAGGCACTTGACATGATATACAAAATTTGAAGAGTTACATTCTTTAGAAAACTTCTATGAGTTCTGCCTAAATGATTGTTATCCATAGTGTGCCTAAATAATTGTTCGATCTAGAGGTGATCCAAAGATTCGTCTATATTAGACGTAACAATAATGCAGTGTTTTTTTTGTTTATTTTTTAGCCTACAAATGTTTGACAAGAAGAGGATGAAAGAGTGACATAGGCGAGCTCTGTAGCATATATAGAATGTTTGCTATCCACTGGTACATCTTTAACCCGAGCCTACCTACTGTATAGATGTGTTTAGTACGTGCTTACTATGCTTAATTTTGGGGATAATATAGTGCGACGTGTAAGAAAATTCAGAACTATGTTGTATGCTCTAGCTGAATTTGTTTACTTCCTACAAAAAAATGGATGAACTACTGATCCAGTTCATGTTGTGATCCTCCTCCAAGGAGTTTTTTTTGTTTCTTTGCTATCTGAAAGATTCCTTTTTTTTTTTTTTGCTTTGTTGAAGTGGAAGGAGCTCATTGGTGTACCTTTGTTGAAATGGCTCCTTTTAATCCTCATTGTTTCACATGTCTGTTTCATTTTCGTTTTTAAGGGACTGGCCTTATTAAAGGTTGTTTAAAAGCTT

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CDS seq

GCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGACGGAGAGGAGAGGAGGAGGCAAGCTTGCAATCTCACAACCATCTATCGATTTCTCCCTTCCTTCTCTTTCTTCTTTCTTTCTTTCTTTCGTTTCCCCCTCTCACATGTCAGGTTATTTCTTCTCCTCATCCTCTCC

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Protein seq

ATSLCPILLPANPPSPSIRLIHAASSRPGARTAPAFTKTTEQGDDMPPVLTSSTVMASSTLWLRPRGAARAAAGAPLLLLHPLVVTAAVAAGGGQIRRPTPADPPSSPLPSLVAAVARVPTLAAEPAARLPPMPFPHGGVGPAAGAGLPYVFPRRRVASPSSPPQLPIRSPLNSRPLLSTRNTMTVAAEVDASPDGEERRRQACNLTTIYRFLPSFSFFFLSFFRFPLSHVRLFLLLILS

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0002570 OsAzu_10g0002570.01 Chr10 3177152 3178807 + NAM
CDS seq

ATGATGTCTGTGAAGGAACCAACGGATGGCCATGCGGTAGATCCGGAAAAATCCTCTGAATCAAGTGTAGGAGTTTGTTCAAAGGAGCTATCTGCCAACCCATCCCCAACACGCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGA

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Protein seq

MMSVKEPTDGHAVDPEKSSESSVGVCSKELSANPSPTRNISLPNPPPGQSAIPIHQANPCGLLPAGGKDGAGVYKDDGARGRHASCADLLYRDGLLDLVVASTGGRPSCRRCSPPPSPSTCGDGGGGGGGRADPAPDAGGSAVVPPPFPCGGSGEGTYVGGRAGRASAADALPSWRRRTGRRRRTAIRLPPSPRCLSVLSSAASHPFPSQLSTSPLYAEHHDRRRRGRRIP

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Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0002570 OsAzu_10g0002570.03 Chr10 3177199 3179458 + NAM
CDS seq

ATGATGTCTGTGAAGGAACCAACGGATGGCCATGCGGTAGATCCGGAAAAATCCTCTGAATCAAGTGTAGGAGTTTGTTCAAAGGAGCTATCTGCCAACCCATCCCCAACACGCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGA

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Protein seq

MMSVKEPTDGHAVDPEKSSESSVGVCSKELSANPSPTRNISLPNPPPGQSAIPIHQANPCGLLPAGGKDGAGVYKDDGARGRHASCADLLYRDGLLDLVVASTGGRPSCRRCSPPPSPSTCGDGGGGGGGRADPAPDAGGSAVVPPPFPCGGSGEGTYVGGRAGRASAADALPSWRRRTGRRRRTAIRLPPSPRCLSVLSSAASHPFPSQLSTSPLYAEHHDRRRRGRRIP

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Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0002570 OsAzu_10g0002570.02 Chr10 3177199 3179458 + NAM
CDS seq

ATGATGTCTGTGAAGGAACCAACGGATGGCCATGCGGTAGATCCGGAAAAATCCTCTGAATCAAGTGTAGGAGTTTGTTCAAAGGAGCTATCTGCCAACCCATCCCCAACACGCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGA

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Protein seq

MMSVKEPTDGHAVDPEKSSESSVGVCSKELSANPSPTRNISLPNPPPGQSAIPIHQANPCGLLPAGGKDGAGVYKDDGARGRHASCADLLYRDGLLDLVVASTGGRPSCRRCSPPPSPSTCGDGGGGGGGRADPAPDAGGSAVVPPPFPCGGSGEGTYVGGRAGRASAADALPSWRRRTGRRRRTAIRLPPSPRCLSVLSSAASHPFPSQLSTSPLYAEHHDRRRRGRRIP

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Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0002570 OsAzu_10g0002570.04 Chr10 3177199 3178807 + NAM
CDS seq

ATGATGTCTGTGAAGGAACCAACGGATGGCCATGCGGTAGATCCGGAAAAATCCTCTGAATCAAGTGTAGGAGTTTGTTCAAAGGAGCTATCTGCCAACCCATCCCCAACACGCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGA

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Protein seq

MMSVKEPTDGHAVDPEKSSESSVGVCSKELSANPSPTRNISLPNPPPGQSAIPIHQANPCGLLPAGGKDGAGVYKDDGARGRHASCADLLYRDGLLDLVVASTGGRPSCRRCSPPPSPSTCGDGGGGGGGRADPAPDAGGSAVVPPPFPCGGSGEGTYVGGRAGRASAADALPSWRRRTGRRRRTAIRLPPSPRCLSVLSSAASHPFPSQLSTSPLYAEHHDRRRRGRRIP

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Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0002570 OsAzu_10g0002570.05 Chr10 3177315 3179255 + IsoSeq
CDS seq

GCAACATCTCTCTGCCCAATCCTCCTCCCGGCCAATCCGCCATCCCCATCCATCAGGCTAATCCATGCGGCCTCCTCCCGGCCGGGGGCAAGGACGGCGCCGGCGTTTACAAAGACGACGGAGCAAGGGGACGACATGCCTCCTGTGCTGACCTCCTCTACCGTGATGGCCTCCTCGACCTTGTGGTTGCGTCCACGGGGGGCCGCCCGAGCTGCCGCCGGTGCTCCCCTCCTCCTTCTCCATCCACTTGTGGTGACGGCGGCGGTGGCGGCGGGGGGAGGGCAGATCCGGCGCCCGACGCCGGCGGATCCGCCGTCGTCCCCCCTCCCTTCCCTTGTGGCGGCAGTGGCGAGGGTACCTACGTTGGCGGCAGAGCCGGCCGCGCGTCTGCCGCCGATGCCCTTCCCTCATGGCGGCGTCGGACCGGCCGCCGGCGCAGGACTGCCATACGTCTTCCCCCGTCGCCGCGTTGCCTCTCCGTCCTCTCCTCCGCAGCTTCCCATCCGTTCCCCTCTCAACTCTCGACCTCTCCTCTCTACGCGGAACACCATGACCGTCGCCGCCGAGGTCGACGCATCCCCTGACGGAGAGGAGAGGAGGAGGCAAGCTTGCAATCTCACAACCATCTATCGATTTCTCCCTTCCTTCTCTTTCTTCTTTCTTTCTTTCTTTCGTTTCCCCCTCTCACATGTCAGGTTATTTCTTCTCCTCATCCTCTCC

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Protein seq

ATSLCPILLPANPPSPSIRLIHAASSRPGARTAPAFTKTTEQGDDMPPVLTSSTVMASSTLWLRPRGAARAAAGAPLLLLHPLVVTAAVAAGGGQIRRPTPADPPSSPLPSLVAAVARVPTLAAEPAARLPPMPFPHGGVGPAAGAGLPYVFPRRRVASPSSPPQLPIRSPLNSRPLLSTRNTMTVAAEVDASPDGEERRRQACNLTTIYRFLPSFSFFFLSFFRFPLSHVRLFLLLILS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr10 3177918 3178087 + OsAzu_10g0002570.02 OsAzu_10g0002570.03,OsAzu_10g0002570.04,OsAzu_10g0002570.02 All

Expression

Leaf Root Panicle
FPKM 1.677754 3.445210 7.890133

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_10g0147300 RBH 3.546335 3.088844 1.832922
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g05680 RBH 1.554232 1.681536 0.858524
Nipponbare | IRGSP 1.0 | RAP-db Os10g0147300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0002670 RBH 0.107115 0.132912 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0002390 RBH 7.822993 18.796539 12.045047
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0002640 RBH 0.357218 0.348056 0.771354
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0002460 RBH 0.214845 0.206555 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0002480 RBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0002580 RBH 0.857622 4.714236 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G002560 RBH 1.199496 0.743933 1.630954
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0002510 RBH 4.503583 18.868973 7.556621
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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