Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0026960 | OGI:04092830 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:30183757-30184026 | ||||||||
| Gene Symbol | RGAb | ||||||||||
| DNA seq | ATGGGACTTCCACCGTCGTTGAGGGGATTATCTTTAGGTGGTTGCAGCGACGAACTAAGTATGCAGTGCAGAATGGCAGCAACGGAGAAGCTACAGGTCTGGATTGATGGCAAAATTATTGATTAATCACTTGAGGTATCGCTACAGGGGTTAAAGAGGGAGGTAGGCAGCAAGAAGGCGGTCACCAGCGGAAAGGAATGGGTGCATTCTGTCTTGAGAACTACTCCACTTGATACCCTCAGCCTCCTCTTGCTTAAAGTAATTAATTGA |
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| CDS seq | ATGGGACTTCCACCGTCGTTGAGGGGATTATCTTTAGGTGGTTGCAGCGACGAACTAAGTATGCAGTGCAGAATGGCAGCAACGGAGAAGCTACAGGGGTTAAAGAGGGAGGTAGGCAGCAAGAAGGCGGTCACCAGCGGAAAGGAATGGGTGCATTCTGTCTTGAGAACTACTCCACTTGATACCCTCAGCCTCCTCTTGCTTAAAGTAATTAATTGA |
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| Protein seq | MGLPPSLRGLSLGGCSDELSMQCRMAATEKLQGLKREVGSKKAVTSGKEWVHSVLRTTPLDTLSLLLLKVIN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0026960 | OsAzu_04g0026960.01 | Chr04 | 30183757 | 30184026 | + | NAM | ||
| CDS seq | ATGGGACTTCCACCGTCGTTGAGGGGATTATCTTTAGGTGGTTGCAGCGACGAACTAAGTATGCAGTGCAGAATGGCAGCAACGGAGAAGCTACAGGGGTTAAAGAGGGAGGTAGGCAGCAAGAAGGCGGTCACCAGCGGAAAGGAATGGGTGCATTCTGTCTTGAGAACTACTCCACTTGATACCCTCAGCCTCCTCTTGCTTAAAGTAATTAATTGA
More
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| Protein seq | MGLPPSLRGLSLGGCSDELSMQCRMAATEKLQGLKREVGSKKAVTSGKEWVHSVLRTTPLDTLSLLLLKVIN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.403177 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g53000 | SBH | 0.449281 | 0.368280 | 0.270999 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0026930 | SBH | 1.003033 | 2.395791 | 4.491940 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0027710 | SBH | 0.103852 | 10.445362 | 1.663262 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0027440 | RBH | 0.754776 | 0.0 | 3.290091 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0027140 | RBH | 0.045475 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0027410 | SBH | 2.433429 | 9.948519 | 8.328281 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0497000 | RBH | 0.0452975 | 0.011125 | 0.0075795 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026250 | SBH | 0.000000 | 0.066579 | 0.089628 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0501400 | RBH | 3.67931 | 2.0196415 | 4.857551 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0026660 | SBH | 0.016158 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0026480 | SBH | 0.000000 | 0.535674 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0026550 | SBH | 0.000000 | 1.231571 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0026990 | SBH | 0.000000 | 0.076545 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027170 | SBH | 0.071858 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G026380 | SBH | 0.157113 | 7.582769 | 2.315366 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
