Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os11g0222900 OGI:11019820 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr11:6419861-6424350
Gene Symbol -
DNA seq

GAAAGATAGAATGTGGGATTTTCTGTCAACGTATGTATAGACAGTCCAATATTCTAGGAGTAATAGCAAAACATTGGGAGTATTTCAGTCAATTTGTTTTAGTTCAGAAATTTGGGAAAATATCTAGGCTGGCTGCACCAGACCAAGGCCTGCGCCTCTCCCATCGCCGCCGCCCGCCGGCCGCACACCACGCTGATATTCCCGTGCGCCGCCACGATGCGCAACGGCAGGCCCTCTCCCAGTCGCAGGCCACAGCCGCAAGGCAAGCCCCAGATCGGGTGTGGCATCCCCCCACGTCGTCGCGGTAACCTTCTCTTCACCTGCGATCGGCCAACGGCGCCGTCCCCGCCTGCACCGGCGAGCGGCGAGCGGCGACCGTAGCCTGGGCCCTGAGGAGATGAGGGTGAGGCTCCACCGCCACTGGATCTGATCTGCCACCTTCCACCTGCGAGCGGTTTAGTGGATGTTGTCAAAATCAATTCACCGAAGGTTCGTTTTTTTTTTATTGATGATTTGCCGGTAGCGTATAGTCCCTATGTTAATCTGTTTCCCAGCATGCTTATAGGAACAATTGCTAAATTGAACAAAGGTAATAGGAACACCAAAACAATAACTGGGTATAGGTAAACTAGAAAATTGCCAAATTGGATCTATTTCTTGAAAGGAAAAAAAGGGAAAGTAACTTGAACCTATATTTTCAACCAGCAAAATGAGTAGCATTAATTTATTGTTAGCATCATAGTAATCCCCTCTAGATTCACATGGAAAATGCGAACATAAGCAGCATCTGGATATTTGTGAAGATGGAAAAATGACCTGAATAAAACAAGCAAACAAATATGCAAAAGTCCTAGAATAAGAAAGAAACATGATATTGATATGTAATAGGAACTATATATCATAAGTTTCCATGACCTTTCATTTTAACATTTTGCTACATGGGTCTCACTCCACAACATCAACCAACCAGTTTCTGCCTCAAGGATTTAGATTCTTACCTAAAGAAGAATCTACAAACCATTGCCAGCATTTGGCACCTCAGTTAAACGCCAGAGCAGCATCTTAAACTCTTTTTTGTTTCAACAGACTCGTTATAATATGATTGGATAGCATGGAATTTCCGTTTTTTTATCACCGCAGGGCATCCTGTCTCAGGTACTGGTCTTTCTGTTGCAGCATACTTCGCTGTGGACTGAGCATCGGTTGGATCAACCCTCTTGCGGAACAGAACCTTGGGTCTATTTGGGTGCTTCTTAGCTTCATTTTCCCAAATTTCTATTGTTTCTATATTGACCATAGAATCAAGAGCAACTTCCTCAAGGTAATCATGGTACTCAATCTTGATTTCAGAAAGACCAACTAGATCCTTGCAGAGCAATTGGAGTGACAGGAGATGTGGCAAAGCTCCTTTTTCAACTGTAGGGAGATTGGGATTTTGCACCACAAGGCATAAGTGTCGCATACGTGGGAAGTCACCATTTTTTATGATAAAGCCCTGAAGGTCAGATTCAACCAGTTTCAGATAAAGCAAGTGGTGCAATGTGCAAACGTTTGATAGATCCTCCTTATTCAGATTTGTTGATGAAAGGCACAGCTCTGTGAGACCACACAGTGATGTGATGAACTGTGGAAACCGGCTCAACTCGCCCTGCAGTTTCAAGGAGCTGAGATAACCATACGACTTCTCCAGACAACACAGTAGACGGTTAGGAAATTTTCTGGATCGAAGTGACAGAGAATGAGCACCAGTAGTGTCCATGCCAGCCTGAGTAAACTTCTGAATAGCCGCTGAAATTAAGCTGATACTGCTATTACGTTCAGCTGCGGGCTCGCACCATATCTTGACCTTTCTTAGTTTATTCATATGAACCATCAGGCGAGGAAACAAAGAGTTCTTGTCTACAACAAAACCTGCTAGAGTTTGCAATTTACTTTTATCTGATAATATCTTCTCTATTTTATTCGTTTCAAGGACCCAAAGGCCCCTTGCTTCCCTAATCTTAATCTTTCCAAACAGGTGAGCTAGATGTGGCATTATAATGATTTCCACAGGCAATGTGTTTATCCTTGTCTTCCTCAGGTCGAGTGTCTGTAAGCAATGCAGCCCTTTATTGATTTTTCTCGGAATATATGTAATGGTGCTCCCAAGGCCAAGGTATTTTAGATGCAACAGCTTGTATATGTACTTGACATGATCGTCCTTGAGATCATCACATTCTTCTAGATCCAAGACCCTCAACAGCTCACACTTGGCATAATCTAAAGCAAATTCCCCTGCATTTCCAAAGATCGTCAGAGACCTGGCACGAGGTTGCTTACCCTTTGGATTAGTTCCACAATCCATGTATGATTGATTTCCACTTGTAAGGCTCTGGGTTAAGAAGAGGTGGCGGCATTTGCTTCGATCTGGGTCATGGAGGGATGCAATGAAATTATCACACCTGGACTTGTGCAGCATGAATTCGTGCATGATACCGTGAGCCCTGCAGTTCTTCGCCCTTCCATTGTTGGTAACATCCATCGACCTGATGATATTTCGGTCCATTAGCTCCTCCAAGTTTGCATCTGCAACCTCCAGTGAACTGCGAGGATATTGGCATTGTACATAGCCTTCAGCTAACCATCGCCTGATCAGACTGCTCCTTCTGATGGAACAGCCATTGGGGAACACAGTCGTGTACAGTAAGCAGGTCTTGAGGGGATGGCCAGGCAGAGTGTTGTAGTTGTTCGCAAGAACTTGTCGCAGTTCTGCAAAGGCGTGCTCCTTCTCAATGTGATGACCTAGGTTGCAGCAGACTTGATTTCGGTAACATTCAGTGATCCTTTCTCGCCATAGAAAGTTTCCCACACTAACCAGAGCAAGCGGGAGGCCGTCGCATTTCTCCAGAATCGATGGCAAGTCCAACTCCAACTCAGGAGAGTATTCCTTTAGGACAGATTGCAGCAAATCCTTGGAATGGTTCACATTCAGAGTTCTCATATTGTACACAGAACCGGTACCATGGCTGCAGGCATTTGCAACTGGTTTAATAGTCGTTGTCACTAGTACTCTGCTTCTTGTTTCTGTAGGGAAGGTTGATTTTATACAGTTCCACTGCTTCTCCTCAATATCATCAAACACGAGAAGGTACCTAGCAGGTATAATGGAAATACAGAAGTGAATTTAATTCATTGGGAGAAATAACGGTTGTCAAGAGCATTTTTCAGGACAAGCAAACTAGCTAATTGTTGTTAATGATCCAAAATAAGCCTTTTTTGTGTCGGACAAAGTGTGAAGCAGTCAATAACTTAAGTTTTAACAGGTAAGTTGTACTTGTACATGCAGTTCAGATAGTTCGCTATATACGGTGAATCCAATTTCAAAGAAGAAGAAAAAAGTGTAACTGTAAATGCGAACACATGCTACGAAATTGTAAGATAGAACTGATTTCATCTGAAGGAAATTAAATTGCTGGGAAATGAGCTGAAGCAGAGAATTTCTCACCTCTTAGCATTCAGGTGTTGCCTGATATCAGCTTGGACTTGGGACTGTAGCTGGAATCTTTGCTCATCATCCTGAGGAATTTGATTGAATCTTTGGTCATCTTCCTGACGAATTTGGCCGAGTAACGCCGACAGGAGCCCCATGGTATCATCTCTGTGCTTGGACGCCACGACCCAGGCGCGGCCGTCGAACTGGCCGGCGATGTCGGGGCAGTCGTACACTGCCCTCGCGAGCGTCGTCTTCCCCGAGCCTCCGAATCCCACGATGGAGATCACGCGCATCCGCTCCGGCCGGCCCTCCACGTCCTCGAGCAGGAGCAGGTCAAGAAGCTCTTGCCTGGGCACGTTGATGCCCACAAGGCCACAGCTCTGGGCCATGTAATCCGTCGTATTTGCTGAGCCTGAGCTTGATCCGCCAGCTGCGGCGGCGGAGCCGGCGACGCCGTTGACGCCGTAGTTAGCCCTCCGCTCGTGCGCCTCCTCCAGCCGCGACTTGAGCCTCTCGACCTCGCCGGCGAACCGAGAGTCCGCCGCGAGGCGGCGGAGGAACGACGAATCGCGCTCGCACGCGGCGCAGGGCAGGAAGCGGTCGAGGCAGTCCTCGATGTCGTGCGCCAGATCCCGGAGCTCGTCGATGCATGTGGCCTGCACGGCGCTGATCGGCGGATCCTCCCCATTCCGATCCCGCGGGAGCTGGTCGTGCAGGAAGCCATGGATCACGCGGAGCTCCCGCTTGATGAAACCGATGCTGTCCTCCAGGCCCCTCCACTGCTCGTACTTCTTCTCCAGTAGCGCGAAGAGCTTCCCCACGACGATATTAGTGACAGAGCTCAGGGTCTCCATGTCTGCCTCTCAGAGCTGCACTCGCATCATCGCCGATCGAGTCGCACCTTTATCTTTCAAAGATTAATAGCAAGTCACGCGCATTTCAAAGATTGATAGTACGTATATCGCTTGAAGCCTTCAACCTCAATCAATTCTACGCTATAGAATAGTAATATCATCCT

More
CDS seq

ATGGAGACCCTGAGCTCTGTCACTAATATCGTCGTGGGGAAGCTCTTCGCGCTACTGGAGAAGAAGTACGAGCAGTGGAGGGGCCTGGAGGACAGCATCGGTTTCATCAAGCGGGAGCTCCGCGTGATCCATGGCTTCCTGCACGACCAGCTCCCGCGGGATCGGAATGGGGAGGATCCGCCGATCAGCGCCGTGCAGGCCACATGCATCGACGAGCTCCGGGATCTGGCGCACGACATCGAGGACTGCCTCGACCGCTTCCTGCCCTGCGCCGCGTGCGAGCGCGATTCGTCGTTCCTCCGCCGCCTCGCGGCGGACTCTCGGTTCGCCGGCGAGGTCGAGAGGCTCAAGTCGCGGCTGGAGGAGGCGCACGAGCGGAGGGCTAACTACGGCGTCAACGGCGTCGCCGGCTCCGCCGCCGCAGCTGGCGGATCAAGCTCAGGCTCAGCAAATACGACGGATTACATGGCCCAGAGCTGTGGCCTTGTGGGCATCAACGTGCCCAGGCAAGAGCTTCTTGACCTGCTCCTGCTCGAGGACGTGGAGGGCCGGCCGGAGCGGATGCGCGTGATCTCCATCGTGGGATTCGGAGGCTCGGGGAAGACGACGCTCGCGAGGGCAGTGTACGACTGCCCCGACATCGCCGGCCAGTTCGACGGCCGCGCCTGGGTCGTGGCGTCCAAGCACAGAGATGATACCATGGGGCTCCTGTCGGCGTTACTCGGCCAAATTCGTCAGGAAGATGACCAAAGATTCAATCAAATTCCTCAGGATGATGAGCAAAGATTCCAGCTACAGTCCCAAGTCCAAGCTGATATCAGGCAACACCTGAATGCTAAGAGGTACCTTCTCGTGTTTGATGATATTGAGGAGAAGCAGTGGAACTGTATAAAATCAACCTTCCCTACAGAAACAAGAAGCAGAGTACTAGTGACAACGACTATTAAACCAGTTGCAAATGCCTGCAGCCATGGTACCGGTTCTGTGTACAATATGAGAACTCTGAATGTGAACCATTCCAAGGATTTGCTGCAATCTGTCCTAAAGGAATACTCTCCTGAGTTGGAGTTGGACTTGCCATCGATTCTGGAGAAATGCGACGGCCTCCCGCTTGCTCTGGTTAGTGTGGGAAACTTTCTATGGCGAGAAAGGATCACTGAATGTTACCGAAATCAAGTCTGCTGCAACCTAGGTCATCACATTGAGAAGGAGCACGCCTTTGCAGAACTGCGACAAGTTCTTGCGAACAACTACAACACTCTGCCTGGCCATCCCCTCAAGACCTGCTTACTGTACACGACTGTGTTCCCCAATGGCTGTTCCATCAGAAGGAGCAGTCTGATCAGGCGATGGTTAGCTGAAGGCTATGTACAATGCCAATATCCTCGCAGTTCACTGGAGGTTGCAGATGCAAACTTGGAGGAGCTAATGGACCGAAATATCATCAGGTCGATGGATGTTACCAACAATGGAAGGGCGAAGAACTGCAGGGCTCACGGTATCATGCACGAATTCATGCTGCACAAGTCCAGGTGTGATAATTTCATTGCATCCCTCCATGACCCAGATCGAAGCAAATGCCGCCACCTCTTCTTAACCCAGAGCCTTACAAGTGGAAATCAATCATACATGGATTGTGGAACTAATCCAAAGGGTAAGCAACCTCGTGCCAGGTCTCTGACGATCTTTGGAAATGCAGGGGAATTTGCTTTAGATTATGCCAAGTGTGAGCTGTTGAGGGTCTTGGATCTAGAAGAATGTGATGATCTCAAGGACGATCATGTCAAGTACATATACAAGCTGTTGCATCTAAAATACCTTGGCCTTGGGAGCACCATTACATATATTCCGAGAAAAATCAATAAAGGGCTGCATTGCTTACAGACACTCGACCTGAGGAAGACAAGGATAAACACATTGCCTGTGGAAATCATTATAATGCCACATCTAGCTCACCTGTTTGGAAAGATTAAGATTAGGGAAGCAAGGGGCCTTTGGGTCCTTGAAACGAATAAAATAGAGAAGATATTATCAGATAAAAGTAAATTGCAAACTCTAGCAGGTTTTGTTGTAGACAAGAACTCTTTGTTTCCTCGCCTGATGGTTCATATGAATAAACTAAGAAAGGTCAAGATATGGTGCGAGCCCGCAGCTGAACGTAATAGCAGTATCAGCTTAATTTCAGCGGCTATTCAGAAGTTTACTCAGGCTGGCATGGACACTACTGGTGCTCATTCTCTGTCACTTCGATCCAGAAAATTTCCTAACCGTCTACTGTGTTGTCTGGAGAAGTCGTATGGTTATCTCAGCTCCTTGAAACTGCAGGGCGAGTTGAGCCGGTTTCCACAGTTCATCACATCACTGTGTGGTCTCACAGAGCTGTGCCTTTCATCAACAAATCTGAATAAGGAGGATCTATCAAACGTTTGCACATTGCACCACTTGCTTTATCTGAAACTGGTTGAATCTGACCTTCAGGGCTTTATCATAAAAAATGGTGACTTCCCACGTATGCGACACTTATGCCTTGTGGTGCAAAATCCCAATCTCCCTACAGTTGAAAAAGGAGCTTTGCCACATCTCCTGTCACTCCAATTGCTCTGCAAGGATCTAGTTGGTCTTTCTGAAATCAAGATTGAGTACCATGATTACCTTGAGGAAGTTGCTCTTGATTCTATGGTCAATATAGAAACAATAGAAATTTGGGAAAATGAAGCTAAGAAGCACCCAAATAGACCCAAGGTTCTGTTCCGCAAGAGGGTTGATCCAACCGATGCTCAGTCCACAGCGAAGTATGCTGCAACAGAAAGACCAGTACCTGAGACAGGATGCCCTGCGGTGATAAAAAAACGGAAATTCCATGCTATCCAATCATATTATAACGAGTCTGTTGAAACAAAAAAGAGTTTAAGATGCTGCTCTGGCGTTTAA

More
Protein seq

METLSSVTNIVVGKLFALLEKKYEQWRGLEDSIGFIKRELRVIHGFLHDQLPRDRNGEDPPISAVQATCIDELRDLAHDIEDCLDRFLPCAACERDSSFLRRLAADSRFAGEVERLKSRLEEAHERRANYGVNGVAGSAAAAGGSSSGSANTTDYMAQSCGLVGINVPRQELLDLLLLEDVEGRPERMRVISIVGFGGSGKTTLARAVYDCPDIAGQFDGRAWVVASKHRDDTMGLLSALLGQIRQEDDQRFNQIPQDDEQRFQLQSQVQADIRQHLNAKRYLLVFDDIEEKQWNCIKSTFPTETRSRVLVTTTIKPVANACSHGTGSVYNMRTLNVNHSKDLLQSVLKEYSPELELDLPSILEKCDGLPLALVSVGNFLWRERITECYRNQVCCNLGHHIEKEHAFAELRQVLANNYNTLPGHPLKTCLLYTTVFPNGCSIRRSSLIRRWLAEGYVQCQYPRSSLEVADANLEELMDRNIIRSMDVTNNGRAKNCRAHGIMHEFMLHKSRCDNFIASLHDPDRSKCRHLFLTQSLTSGNQSYMDCGTNPKGKQPRARSLTIFGNAGEFALDYAKCELLRVLDLEECDDLKDDHVKYIYKLLHLKYLGLGSTITYIPRKINKGLHCLQTLDLRKTRINTLPVEIIIMPHLAHLFGKIKIREARGLWVLETNKIEKILSDKSKLQTLAGFVVDKNSLFPRLMVHMNKLRKVKIWCEPAAERNSSISLISAAIQKFTQAGMDTTGAHSLSLRSRKFPNRLLCCLEKSYGYLSSLKLQGELSRFPQFITSLCGLTELCLSSTNLNKEDLSNVCTLHHLLYLKLVESDLQGFIIKNGDFPRMRHLCLVVQNPNLPTVEKGALPHLLSLQLLCKDLVGLSEIKIEYHDYLEEVALDSMVNIETIEIWENEAKKHPNRPKVLFRKRVDPTDAQSTAKYAATERPVPETGCPAVIKKRKFHAIQSYYNESVETKKSLRCCSGV

Function Disease resistance protein RGA4 [UniProtKB/Swiss-Prot:F7J0M6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os11g0222900 Os11t0222900-01 Chr11 6419861 6424350 - irgsp1_rep
CDS seq

ATGGAGACCCTGAGCTCTGTCACTAATATCGTCGTGGGGAAGCTCTTCGCGCTACTGGAGAAGAAGTACGAGCAGTGGAGGGGCCTGGAGGACAGCATCGGTTTCATCAAGCGGGAGCTCCGCGTGATCCATGGCTTCCTGCACGACCAGCTCCCGCGGGATCGGAATGGGGAGGATCCGCCGATCAGCGCCGTGCAGGCCACATGCATCGACGAGCTCCGGGATCTGGCGCACGACATCGAGGACTGCCTCGACCGCTTCCTGCCCTGCGCCGCGTGCGAGCGCGATTCGTCGTTCCTCCGCCGCCTCGCGGCGGACTCTCGGTTCGCCGGCGAGGTCGAGAGGCTCAAGTCGCGGCTGGAGGAGGCGCACGAGCGGAGGGCTAACTACGGCGTCAACGGCGTCGCCGGCTCCGCCGCCGCAGCTGGCGGATCAAGCTCAGGCTCAGCAAATACGACGGATTACATGGCCCAGAGCTGTGGCCTTGTGGGCATCAACGTGCCCAGGCAAGAGCTTCTTGACCTGCTCCTGCTCGAGGACGTGGAGGGCCGGCCGGAGCGGATGCGCGTGATCTCCATCGTGGGATTCGGAGGCTCGGGGAAGACGACGCTCGCGAGGGCAGTGTACGACTGCCCCGACATCGCCGGCCAGTTCGACGGCCGCGCCTGGGTCGTGGCGTCCAAGCACAGAGATGATACCATGGGGCTCCTGTCGGCGTTACTCGGCCAAATTCGTCAGGAAGATGACCAAAGATTCAATCAAATTCCTCAGGATGATGAGCAAAGATTCCAGCTACAGTCCCAAGTCCAAGCTGATATCAGGCAACACCTGAATGCTAAGAGGTACCTTCTCGTGTTTGATGATATTGAGGAGAAGCAGTGGAACTGTATAAAATCAACCTTCCCTACAGAAACAAGAAGCAGAGTACTAGTGACAACGACTATTAAACCAGTTGCAAATGCCTGCAGCCATGGTACCGGTTCTGTGTACAATATGAGAACTCTGAATGTGAACCATTCCAAGGATTTGCTGCAATCTGTCCTAAAGGAATACTCTCCTGAGTTGGAGTTGGACTTGCCATCGATTCTGGAGAAATGCGACGGCCTCCCGCTTGCTCTGGTTAGTGTGGGAAACTTTCTATGGCGAGAAAGGATCACTGAATGTTACCGAAATCAAGTCTGCTGCAACCTAGGTCATCACATTGAGAAGGAGCACGCCTTTGCAGAACTGCGACAAGTTCTTGCGAACAACTACAACACTCTGCCTGGCCATCCCCTCAAGACCTGCTTACTGTACACGACTGTGTTCCCCAATGGCTGTTCCATCAGAAGGAGCAGTCTGATCAGGCGATGGTTAGCTGAAGGCTATGTACAATGCCAATATCCTCGCAGTTCACTGGAGGTTGCAGATGCAAACTTGGAGGAGCTAATGGACCGAAATATCATCAGGTCGATGGATGTTACCAACAATGGAAGGGCGAAGAACTGCAGGGCTCACGGTATCATGCACGAATTCATGCTGCACAAGTCCAGGTGTGATAATTTCATTGCATCCCTCCATGACCCAGATCGAAGCAAATGCCGCCACCTCTTCTTAACCCAGAGCCTTACAAGTGGAAATCAATCATACATGGATTGTGGAACTAATCCAAAGGGTAAGCAACCTCGTGCCAGGTCTCTGACGATCTTTGGAAATGCAGGGGAATTTGCTTTAGATTATGCCAAGTGTGAGCTGTTGAGGGTCTTGGATCTAGAAGAATGTGATGATCTCAAGGACGATCATGTCAAGTACATATACAAGCTGTTGCATCTAAAATACCTTGGCCTTGGGAGCACCATTACATATATTCCGAGAAAAATCAATAAAGGGCTGCATTGCTTACAGACACTCGACCTGAGGAAGACAAGGATAAACACATTGCCTGTGGAAATCATTATAATGCCACATCTAGCTCACCTGTTTGGAAAGATTAAGATTAGGGAAGCAAGGGGCCTTTGGGTCCTTGAAACGAATAAAATAGAGAAGATATTATCAGATAAAAGTAAATTGCAAACTCTAGCAGGTTTTGTTGTAGACAAGAACTCTTTGTTTCCTCGCCTGATGGTTCATATGAATAAACTAAGAAAGGTCAAGATATGGTGCGAGCCCGCAGCTGAACGTAATAGCAGTATCAGCTTAATTTCAGCGGCTATTCAGAAGTTTACTCAGGCTGGCATGGACACTACTGGTGCTCATTCTCTGTCACTTCGATCCAGAAAATTTCCTAACCGTCTACTGTGTTGTCTGGAGAAGTCGTATGGTTATCTCAGCTCCTTGAAACTGCAGGGCGAGTTGAGCCGGTTTCCACAGTTCATCACATCACTGTGTGGTCTCACAGAGCTGTGCCTTTCATCAACAAATCTGAATAAGGAGGATCTATCAAACGTTTGCACATTGCACCACTTGCTTTATCTGAAACTGGTTGAATCTGACCTTCAGGGCTTTATCATAAAAAATGGTGACTTCCCACGTATGCGACACTTATGCCTTGTGGTGCAAAATCCCAATCTCCCTACAGTTGAAAAAGGAGCTTTGCCACATCTCCTGTCACTCCAATTGCTCTGCAAGGATCTAGTTGGTCTTTCTGAAATCAAGATTGAGTACCATGATTACCTTGAGGAAGTTGCTCTTGATTCTATGGTCAATATAGAAACAATAGAAATTTGGGAAAATGAAGCTAAGAAGCACCCAAATAGACCCAAGGTTCTGTTCCGCAAGAGGGTTGATCCAACCGATGCTCAGTCCACAGCGAAGTATGCTGCAACAGAAAGACCAGTACCTGAGACAGGATGCCCTGCGGTGATAAAAAAACGGAAATTCCATGCTATCCAATCATATTATAACGAGTCTGTTGAAACAAAAAAGAGTTTAAGATGCTGCTCTGGCGTTTAA

More
Protein seq

METLSSVTNIVVGKLFALLEKKYEQWRGLEDSIGFIKRELRVIHGFLHDQLPRDRNGEDPPISAVQATCIDELRDLAHDIEDCLDRFLPCAACERDSSFLRRLAADSRFAGEVERLKSRLEEAHERRANYGVNGVAGSAAAAGGSSSGSANTTDYMAQSCGLVGINVPRQELLDLLLLEDVEGRPERMRVISIVGFGGSGKTTLARAVYDCPDIAGQFDGRAWVVASKHRDDTMGLLSALLGQIRQEDDQRFNQIPQDDEQRFQLQSQVQADIRQHLNAKRYLLVFDDIEEKQWNCIKSTFPTETRSRVLVTTTIKPVANACSHGTGSVYNMRTLNVNHSKDLLQSVLKEYSPELELDLPSILEKCDGLPLALVSVGNFLWRERITECYRNQVCCNLGHHIEKEHAFAELRQVLANNYNTLPGHPLKTCLLYTTVFPNGCSIRRSSLIRRWLAEGYVQCQYPRSSLEVADANLEELMDRNIIRSMDVTNNGRAKNCRAHGIMHEFMLHKSRCDNFIASLHDPDRSKCRHLFLTQSLTSGNQSYMDCGTNPKGKQPRARSLTIFGNAGEFALDYAKCELLRVLDLEECDDLKDDHVKYIYKLLHLKYLGLGSTITYIPRKINKGLHCLQTLDLRKTRINTLPVEIIIMPHLAHLFGKIKIREARGLWVLETNKIEKILSDKSKLQTLAGFVVDKNSLFPRLMVHMNKLRKVKIWCEPAAERNSSISLISAAIQKFTQAGMDTTGAHSLSLRSRKFPNRLLCCLEKSYGYLSSLKLQGELSRFPQFITSLCGLTELCLSSTNLNKEDLSNVCTLHHLLYLKLVESDLQGFIIKNGDFPRMRHLCLVVQNPNLPTVEKGALPHLLSLQLLCKDLVGLSEIKIEYHDYLEEVALDSMVNIETIEIWENEAKKHPNRPKVLFRKRVDPTDAQSTAKYAATERPVPETGCPAVIKKRKFHAIQSYYNESVETKKSLRCCSGV

More
Gene Transcript Chromosome Start End Strand Source
Os11g0222900 Os11t0222900-02 Chr11 6420713 6424204 - irgsp1_rep
CDS seq

ATGGAGACCCTGAGCTCTGTCACTAATATCGTCGTGGGGAAGCTCTTCGCGCTACTGGAGAAGAAGTACGAGCAGTGGAGGGGCCTGGAGGACAGCATCGGTTTCATCAAGCGGGAGCTCCGCGTGATCCATGGCTTCCTGCACGACCAGCTCCCGCGGGATCGGAATGGGGAGGATCCGCCGATCAGCGCCGTGCAGGCCACATGCATCGACGAGCTCCGGGATCTGGCGCACGACATCGAGGACTGCCTCGACCGCTTCCTGCCCTGCGCCGCGTGCGAGCGCGATTCGTCGTTCCTCCGCCGCCTCGCGGCGGACTCTCGGTTCGCCGGCGAGGTCGAGAGGCTCAAGTCGCGGCTGGAGGAGGCGCACGAGCGGAGGGCTAACTACGGCGTCAACGGCGTCGCCGGCTCCGCCGCCGCAGCTGGCGGATCAAGCTCAGGCTCAGCAAATACGACGGATTACATGGCCCAGAGCTGTGGCCTTGTGGGCATCAACGTGCCCAGGCAAGAGCTTCTTGACCTGCTCCTGCTCGAGGACGTGGAGGGCCGGCCGGAGCGGATGCGCGTGATCTCCATCGTGGGATTCGGAGGCTCGGGGAAGACGACGCTCGCGAGGGCAGTGTACGACTGCCCCGACATCGCCGGCCAGTTCGACGGCCGCGCCTGGGTCGTGGCGTCCAAGCACAGAGATGATACCATGGGGCTCCTGTCGGCGTTACTCGGCCAAATTCGTCAGGAAGATGACCAAAGATTCAATCAAATTCCTCAGGATGATGAGCAAAGATTCCAGCTACAGTCCCAAGTCCAAGCTGATATCAGGCAACACCTGAATGCTAAGAGGTACCTTCTCGTGTTTGATGATATTGAGGAGAAGCAGTGGAACTGTATAAAATCAACCTTCCCTACAGAAACAAGAAGCAGAGTACTAGTGACAACGACTATTAAACCAGTTGCAAATGCCTGCAGCCATGGTACCGGTTCTGTGTACAATATGAGAACTCTGAATGTGAACCATTCCAAGGATTTGCTGCAATCTGTCCTAAAGGAATACTCTCCTGAGTTGGAGTTGGACTTGCCATCGATTCTGGAGAAATGCGACGGCCTCCCGCTTGCTCTGGTTAGTGTGGGAAACTTTCTATGGCGAGAAAGGATCACTGAATGTTACCGAAATCAAGTCTGCTGCAACCTAGGTCATCACATTGAGAAGGAGCACGCCTTTGCAGAACTGCGACAAGTTCTTGCGAACAACTACAACACTCTGCCTGGCCATCCCCTCAAGACCTGCTTACTGTACACGACTGTGTTCCCCAATGGCTGTTCCATCAGAAGGAGCAGTCTGATCAGGCGATGGTTAGCTGAAGGCTATGTACAATGCCAATATCCTCGCAGTTCACTGGAGGTTGCAGATGCAAACTTGGAGGAGCTAATGGACCGAAATATCATCAGGTCGATGGATGTTACCAACAATGGAAGGGCGAAGAACTGCAGGGCTCACGGTATCATGCACGAATTCATGCTGCACAAGTCCAGGTGTGATAATTTCATTGCATCCCTCCATGACCCAGATCGAAGCAAATGCCGCCACCTCTTCTTAACCCAGAGCCTTACAAGTGGAAATCAATCATACATGGATTGTGGAACTAATCCAAAGGGTAAGCAACCTCGTGCCAGGTCTCTGACGATCTTTGGAAATGCAGGGGAATTTGCTTTAGATTATGCCAAGTGTGAGCTGTTGAGGGTCTTGGATCTAGAAGAATGTGATGATCTCAAGGACGATCATGTCAAGTACATATACAAGCTGTTGCATCTAAAATACCTTGGCCTTGGGAGCACCATTACATATATTCCGAGAAAAATCAATAAAGGGCTGCATTGCTTACAGACACTCGACCTGAGGAAGACAAGGATAAACACATTGCCTGTGGAAATCATTATAATGCCACATCTAGCTCACCTGTTTGGAAAGATTAAGATTAGGGAAGCAAGGGGCCTTTGGGTCCTTGAAACGAATAAAATAGAGAAGATATTATCAGATAAAAGTAAATTGCAAACTCTAGCAGGTTTTGTTGTAGACAAGAACTCTTTGTTTCCTCGCCTGATGGTTCATATGAATAAACTAAGAAAGGTCAAGATATGGTGCGAGCCCGCAGCTGAACGTAATAGCAGTATCAGCTTAATTTCAGCGGCTATTCAGAAGTTTACTCAGGCTGGCATGGACACTACTGGTGCTCATTCTCTGTCACTTCGATCCAGAAAATTTCCTAACCGTCTACTGTGTTGTCTGGAGAAGTCGTATGGTTATCTCAGCTCCTTGAAACTGCAGGGCGAGTTGAGCCGGTTTCCACAGTTCATCACATCACTGTGTGGTCTCACAGAGCTGTGCCTTTCATCAACAAATCTGAATAAGGAGGATCTATCAAACGTTTGCACATTGCACCACTTGCTTTATCTGAAACTGGTTGAATCTGACCTTCAGGGCTTTATCATAAAAAATGGTGACTTCCCACGTATGCGACACTTATGCCTTGTGGTGCAAAATCCCAATCTCCCTACAGTTGAAAAAGGAGCTTTGCCACATCTCCTGTCACTCCAATTGCTCTGCAAGGATCTAGTTGGTCTTTCTGAAATCAAGATTGAGTACCATGATTACCTTGAGGAAGTTGCTCTTGATTCTATGGTCAATATAGAAACAATAGAAATTTGGGAAAATGAAGCTAAGAAGCACCCAAATAGACCCAAGGTTCTGTTCCGCAAGAGGGTTGATCCAACCGATGCTCAGTCCACAGCGAAGTATGCTGCAACAGAAAGACCAGTACCTGAGACAGGATGCCCTGCGGTGATAAAAAAACGGAAATTCCATGCTATCCAATCATATTATAACGAGTCTGTTGAAACAAAAAAGAGTTTAAGATGCTGCTCTGGCGTTTAA

More
Protein seq

METLSSVTNIVVGKLFALLEKKYEQWRGLEDSIGFIKRELRVIHGFLHDQLPRDRNGEDPPISAVQATCIDELRDLAHDIEDCLDRFLPCAACERDSSFLRRLAADSRFAGEVERLKSRLEEAHERRANYGVNGVAGSAAAAGGSSSGSANTTDYMAQSCGLVGINVPRQELLDLLLLEDVEGRPERMRVISIVGFGGSGKTTLARAVYDCPDIAGQFDGRAWVVASKHRDDTMGLLSALLGQIRQEDDQRFNQIPQDDEQRFQLQSQVQADIRQHLNAKRYLLVFDDIEEKQWNCIKSTFPTETRSRVLVTTTIKPVANACSHGTGSVYNMRTLNVNHSKDLLQSVLKEYSPELELDLPSILEKCDGLPLALVSVGNFLWRERITECYRNQVCCNLGHHIEKEHAFAELRQVLANNYNTLPGHPLKTCLLYTTVFPNGCSIRRSSLIRRWLAEGYVQCQYPRSSLEVADANLEELMDRNIIRSMDVTNNGRAKNCRAHGIMHEFMLHKSRCDNFIASLHDPDRSKCRHLFLTQSLTSGNQSYMDCGTNPKGKQPRARSLTIFGNAGEFALDYAKCELLRVLDLEECDDLKDDHVKYIYKLLHLKYLGLGSTITYIPRKINKGLHCLQTLDLRKTRINTLPVEIIIMPHLAHLFGKIKIREARGLWVLETNKIEKILSDKSKLQTLAGFVVDKNSLFPRLMVHMNKLRKVKIWCEPAAERNSSISLISAAIQKFTQAGMDTTGAHSLSLRSRKFPNRLLCCLEKSYGYLSSLKLQGELSRFPQFITSLCGLTELCLSSTNLNKEDLSNVCTLHHLLYLKLVESDLQGFIIKNGDFPRMRHLCLVVQNPNLPTVEKGALPHLLSLQLLCKDLVGLSEIKIEYHDYLEEVALDSMVNIETIEIWENEAKKHPNRPKVLFRKRVDPTDAQSTAKYAATERPVPETGCPAVIKKRKFHAIQSYYNESVETKKSLRCCSGV

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0222900 RBH 0.067895 0.637575 0.825293
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g11550 RBH 0.563842 0.409763 0.340933
Nipponbare | IRGSP 1.0 | RAP-db Os11g0225100 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0007770 RBH 0.940045 0.723296 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0020050 RBH 0.492458 1.480033 3.188077
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0007670 RBH 4.880000 7.189763 0.652131
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0007740 SBH 0.194044 0.375342 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0019900 RBH 6.415038 11.786870 15.003955
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0105100 RBH 0.245095 5.959211 0.0039005
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0007910 RBH 0.0 0.126530 0.146051
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0110900 SBH 8.599647 14.278709 6.833309
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0007920 SBH 0.096497 0.112980 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0020360 RBH 0.652731 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0007650 RBH 12.632552 5.476647 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023740 SBH 0.0 0.0 0.357565
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0007990 RBH 0.000000 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G007930 SBH 0.411344 2.441388 0.656447
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0007880 RBH 0.0 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.