Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0161500 | OGI:02001240 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:3325040-3326725 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGCACCTCGATTTATCGTATAATGCCTTCTCATGGTCCATACCAGATTCACTACCAAATTTGAGGGTTCTAGAACTGTCGAACAATGGATTCCATGGGACCATACCACATTCACTCTCAAGACTACAAAAGCTCCAAGACCTATATCTGTACAGAAACAACCTCACCGGAGGAATCCCAGAGGAGCTTGGGAACCTAACCAATCTTGAGGCCCTGTACCTGTCCAGAAACCGGTTAGTTGGAAGTTTGCCTCCCTCTTTTGCCAGGATGCAACAATTATCATTTTTTGCGATAGACAGTAACTACATCAATGGTAGTATCCCGTTGGAGATATTTTCAAATTGTACTTGGCTCAACTGGTTTGATGTTTCCAACAACATGTTAACTGGAAGCATCCCACCACTAATCAGCAACTGGACAAATCTACACTACTTGGCCCTCTTTAACAACACATTTACCGGTGCAATCCCATGGGAGATAGGAAACTTAGCACAAGTATATTTAGAGGTGGACATGTCACAAAATCTATTTACTGGAAAGATACCATTAAATATCTGCAATGCAACTTTGGAATACCTTGCGATCAGTGACAACCATCTAGAAGGCGAGCTCCCTGGATGCCTGTGGGGTTTGAAAGGTCTCGTTTACATGGATTTGTCAAGAAACACTTTTTCTGGGAAAATTGCACCCTCAGACACTCCTAACAATGATTCCGACCTACTCGCCCTGGACCTGTCAAACAATAACTTTTCGGGTTATTTCCCAGTCGTACTGAGGAATCTCAGCAGACTAGAATTTTTGAATCTTGGATATAATAGGATTTCTGGTGAGATTCCTTCGTGGATAGGGGAAAGTTTTTCTCATCTGATGATTCTACAGCTAAGGTCAAACATGTTCCATGGAAGTATTCCTTGGCAGCTATCACAACTCCCCAAACTACAATTGCTTGATCTAGCTGAAAATAATTTTACAGGCTCCATACCAGGTAGTTTCGCCAACTTATCATGTTTGCACTCAGAAACTAGATGTGTGTGTAGCTTAATTGGAGTATACCTCGATCTAGATAGTAGACACTACATTGATATTGATTGGAAGGGAAGGGAGCATCCATTTAAAGACATAAGTCTACTTGCAACAGGTATTGATTTATCAAACAATTCTCTCTCTGGTGAGATCCCTTCAGAATTGACAAATCTTAGAGGTATTCAGTCCTTAAATATTTCTAGAAATTTTCTACAAGGAAATATCCCAAATGGAATTGGCAATCTAACACATTTAGAGTCTCTTGACCTCTCTTGGAATAAACTCTCAGGCCATATTCCTCATAGCATATCAAACTTAATGAGTCTCGAATGGCTTAATCTCTCGAACAACCTTCTATCGGGAGAGATACCTACAGGTAATCAACTCAGAACACTTGATGACCCATCGATTTATGCCAACAACCTGGGGCTTTGTGGATTTCCTTTGAAAATTTCATGCTCAAACCATTCAAGTTCTACGACTACACTAGAAGGGGCAAAAGAACACCACCAAGAACTGGAAACTCTATGGCTGTACTGCTCAGTAACTGCAGGAGCTGTCTTTGGTGTTTGGCTGTGGTTTGGAGCACTGTTTTTCTGTAATGCCTGGAGGCTTGCTTTCTTCTGTCGCATCGATGCCATGCAGCAGAAACTTATGTAA
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| CDS seq | ATGGAGCACCTCGATTTATCGTATAATGCCTTCTCATGGTCCATACCAGATTCACTACCAAATTTGAGGGTTCTAGAACTGTCGAACAATGGATTCCATGGGACCATACCACATTCACTCTCAAGACTACAAAAGCTCCAAGACCTATATCTGTACAGAAACAACCTCACCGGAGGAATCCCAGAGGAGCTTGGGAACCTAACCAATCTTGAGGCCCTGTACCTGTCCAGAAACCGGTTAGTTGGAAGTTTGCCTCCCTCTTTTGCCAGGATGCAACAATTATCATTTTTTGCGATAGACAGTAACTACATCAATGGTAGTATCCCGTTGGAGATATTTTCAAATTGTACTTGGCTCAACTGGTTTGATGTTTCCAACAACATGTTAACTGGAAGCATCCCACCACTAATCAGCAACTGGACAAATCTACACTACTTGGCCCTCTTTAACAACACATTTACCGGTGCAATCCCATGGGAGATAGGAAACTTAGCACAAGTATATTTAGAGGTGGACATGTCACAAAATCTATTTACTGGAAAGATACCATTAAATATCTGCAATGCAACTTTGGAATACCTTGCGATCAGTGACAACCATCTAGAAGGCGAGCTCCCTGGATGCCTGTGGGGTTTGAAAGGTCTCGTTTACATGGATTTGTCAAGAAACACTTTTTCTGGGAAAATTGCACCCTCAGACACTCCTAACAATGATTCCGACCTACTCGCCCTGGACCTGTCAAACAATAACTTTTCGGGTTATTTCCCAGTCGTACTGAGGAATCTCAGCAGACTAGAATTTTTGAATCTTGGATATAATAGGATTTCTGGTGAGATTCCTTCGTGGATAGGGGAAAGTTTTTCTCATCTGATGATTCTACAGCTAAGGTCAAACATGTTCCATGGAAGTATTCCTTGGCAGCTATCACAACTCCCCAAACTACAATTGCTTGATCTAGCTGAAAATAATTTTACAGGCTCCATACCAGGTAGTTTCGCCAACTTATCATGTTTGCACTCAGAAACTAGATGTGTGTGTAGCTTAATTGGAGTATACCTCGATCTAGATAGTAGACACTACATTGATATTGATTGGAAGGGAAGGGAGCATCCATTTAAAGACATAAGTCTACTTGCAACAGGTATTGATTTATCAAACAATTCTCTCTCTGGTGAGATCCCTTCAGAATTGACAAATCTTAGAGGTATTCAGTCCTTAAATATTTCTAGAAATTTTCTACAAGGAAATATCCCAAATGGAATTGGCAATCTAACACATTTAGAGTCTCTTGACCTCTCTTGGAATAAACTCTCAGGCCATATTCCTCATAGCATATCAAACTTAATGAGTCTCGAATGGCTTAATCTCTCGAACAACCTTCTATCGGGAGAGATACCTACAGGTAATCAACTCAGAACACTTGATGACCCATCGATTTATGCCAACAACCTGGGGCTTTGTGGATTTCCTTTGAAAATTTCATGCTCAAACCATTCAAGTTCTACGACTACACTAGAAGGGGCAAAAGAACACCACCAAGAACTGGAAACTCTATGGCTGTACTGCTCAGTAACTGCAGGAGCTGTCTTTGGTGTTTGGCTGTGGTTTGGAGCACTGTTTTTCTGTAATGCCTGGAGGCTTGCTTTCTTCTGTCGCATCGATGCCATGCAGCAGAAACTTATGTAA
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| Protein seq | MEHLDLSYNAFSWSIPDSLPNLRVLELSNNGFHGTIPHSLSRLQKLQDLYLYRNNLTGGIPEELGNLTNLEALYLSRNRLVGSLPPSFARMQQLSFFAIDSNYINGSIPLEIFSNCTWLNWFDVSNNMLTGSIPPLISNWTNLHYLALFNNTFTGAIPWEIGNLAQVYLEVDMSQNLFTGKIPLNICNATLEYLAISDNHLEGELPGCLWGLKGLVYMDLSRNTFSGKIAPSDTPNNDSDLLALDLSNNNFSGYFPVVLRNLSRLEFLNLGYNRISGEIPSWIGESFSHLMILQLRSNMFHGSIPWQLSQLPKLQLLDLAENNFTGSIPGSFANLSCLHSETRCVCSLIGVYLDLDSRHYIDIDWKGREHPFKDISLLATGIDLSNNSLSGEIPSELTNLRGIQSLNISRNFLQGNIPNGIGNLTHLESLDLSWNKLSGHIPHSISNLMSLEWLNLSNNLLSGEIPTGNQLRTLDDPSIYANNLGLCGFPLKISCSNHSSSTTTLEGAKEHHQELETLWLYCSVTAGAVFGVWLWFGALFFCNAWRLAFFCRIDAMQQKLM |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0161500 | Os02t0161500-00 | Chr02 | 3325040 | 3326725 | + | irgsp1_rep | ||
| CDS seq | ATGGAGCACCTCGATTTATCGTATAATGCCTTCTCATGGTCCATACCAGATTCACTACCAAATTTGAGGGTTCTAGAACTGTCGAACAATGGATTCCATGGGACCATACCACATTCACTCTCAAGACTACAAAAGCTCCAAGACCTATATCTGTACAGAAACAACCTCACCGGAGGAATCCCAGAGGAGCTTGGGAACCTAACCAATCTTGAGGCCCTGTACCTGTCCAGAAACCGGTTAGTTGGAAGTTTGCCTCCCTCTTTTGCCAGGATGCAACAATTATCATTTTTTGCGATAGACAGTAACTACATCAATGGTAGTATCCCGTTGGAGATATTTTCAAATTGTACTTGGCTCAACTGGTTTGATGTTTCCAACAACATGTTAACTGGAAGCATCCCACCACTAATCAGCAACTGGACAAATCTACACTACTTGGCCCTCTTTAACAACACATTTACCGGTGCAATCCCATGGGAGATAGGAAACTTAGCACAAGTATATTTAGAGGTGGACATGTCACAAAATCTATTTACTGGAAAGATACCATTAAATATCTGCAATGCAACTTTGGAATACCTTGCGATCAGTGACAACCATCTAGAAGGCGAGCTCCCTGGATGCCTGTGGGGTTTGAAAGGTCTCGTTTACATGGATTTGTCAAGAAACACTTTTTCTGGGAAAATTGCACCCTCAGACACTCCTAACAATGATTCCGACCTACTCGCCCTGGACCTGTCAAACAATAACTTTTCGGGTTATTTCCCAGTCGTACTGAGGAATCTCAGCAGACTAGAATTTTTGAATCTTGGATATAATAGGATTTCTGGTGAGATTCCTTCGTGGATAGGGGAAAGTTTTTCTCATCTGATGATTCTACAGCTAAGGTCAAACATGTTCCATGGAAGTATTCCTTGGCAGCTATCACAACTCCCCAAACTACAATTGCTTGATCTAGCTGAAAATAATTTTACAGGCTCCATACCAGGTAGTTTCGCCAACTTATCATGTTTGCACTCAGAAACTAGATGTGTGTGTAGCTTAATTGGAGTATACCTCGATCTAGATAGTAGACACTACATTGATATTGATTGGAAGGGAAGGGAGCATCCATTTAAAGACATAAGTCTACTTGCAACAGGTATTGATTTATCAAACAATTCTCTCTCTGGTGAGATCCCTTCAGAATTGACAAATCTTAGAGGTATTCAGTCCTTAAATATTTCTAGAAATTTTCTACAAGGAAATATCCCAAATGGAATTGGCAATCTAACACATTTAGAGTCTCTTGACCTCTCTTGGAATAAACTCTCAGGCCATATTCCTCATAGCATATCAAACTTAATGAGTCTCGAATGGCTTAATCTCTCGAACAACCTTCTATCGGGAGAGATACCTACAGGTAATCAACTCAGAACACTTGATGACCCATCGATTTATGCCAACAACCTGGGGCTTTGTGGATTTCCTTTGAAAATTTCATGCTCAAACCATTCAAGTTCTACGACTACACTAGAAGGGGCAAAAGAACACCACCAAGAACTGGAAACTCTATGGCTGTACTGCTCAGTAACTGCAGGAGCTGTCTTTGGTGTTTGGCTGTGGTTTGGAGCACTGTTTTTCTGTAATGCCTGGAGGCTTGCTTTCTTCTGTCGCATCGATGCCATGCAGCAGAAACTTATGTAA
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| Protein seq | MEHLDLSYNAFSWSIPDSLPNLRVLELSNNGFHGTIPHSLSRLQKLQDLYLYRNNLTGGIPEELGNLTNLEALYLSRNRLVGSLPPSFARMQQLSFFAIDSNYINGSIPLEIFSNCTWLNWFDVSNNMLTGSIPPLISNWTNLHYLALFNNTFTGAIPWEIGNLAQVYLEVDMSQNLFTGKIPLNICNATLEYLAISDNHLEGELPGCLWGLKGLVYMDLSRNTFSGKIAPSDTPNNDSDLLALDLSNNNFSGYFPVVLRNLSRLEFLNLGYNRISGEIPSWIGESFSHLMILQLRSNMFHGSIPWQLSQLPKLQLLDLAENNFTGSIPGSFANLSCLHSETRCVCSLIGVYLDLDSRHYIDIDWKGREHPFKDISLLATGIDLSNNSLSGEIPSELTNLRGIQSLNISRNFLQGNIPNGIGNLTHLESLDLSWNKLSGHIPHSISNLMSLEWLNLSNNLLSGEIPTGNQLRTLDDPSIYANNLGLCGFPLKISCSNHSSSTTTLEGAKEHHQELETLWLYCSVTAGAVFGVWLWFGALFFCNAWRLAFFCRIDAMQQKLM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0161500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g06600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0667000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004750 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004950 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004760 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004660 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004710 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0056900 | RBH | 0.077009 | 0.213037 | 0.6367415 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004670 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0059700 | RBH | 0.0094915 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0005080 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | RBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004680 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004740 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004700 | RBH | 0.0 | 0.0 | 0.000000 |
