Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
LOC_Os11g45850 | OGI:11081570 | 9/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:27740142-27741375 | ||||||||
Gene Symbol | WRKY61, OsWRKY61, OsWRKY103, WRKY103 | ||||||||||
DNA seq | ATGGGTGTATTAAAAGTTGGGGCTTATATAAATCTCTGCATACTACATAACAGGAAGGAACCACAGATGGAAAGAAGGAAGGTGATCAGGATGAGTTATACAGAGGATGACGGCTTCAGCTGGAGGAAGTACGGGCAGAAGGACGTGGAAGGCGCCATGCACCCAACTACCCAAAGTAAGTAAGCGATGACGACTCGTGCCAATTAACTTAAAGTTAAATTAAGGTTGATTGATTTAATGAAGCATCGAATGCATGCAAAGAGCTTAATTAATTAAGAGCAGAGCGGAATAATCTGATTAACCCGATCTTGTTCAACTTATAACTGTCGTCGGAACTCTGAAGTTATTTCCGATGTGCCCACAAGATGACGACGGGCTGTAAGGCACGGAAGAAGGTGCAGCGCACCGACGGCGACCCGCTGATGGTCGACGTCGTATACAAGGGGGTTCACAGCTGTGCCGGCGTGCATTCCGACAGCCAGAGATCATCCGCCGCGAGCTCTAAGTCTAACCTGCGGCCGACGAAGAGCATGCAGGTGAGGGCGAGCTCCAAGGACGTCGGCCCCCCAGACGACGGTTACAGCTGGAAGAGGTACGGCCAGAAGAACATCTTCGGCGCTAATTACCCAAGGTTAGTGGCTGATTAACGTACGACTGTACCTGAAATGAACTGGCACTGCTGCTGGAGTACATGAAATCGAACTGATCTCGCTCGCCATCTATTTTGCAGATGCTACTACCGGTGTATACACAAGACCACGACGGGCTGCACTGCGACAAAAAATGCACAGGCCACCGATGGTGACCCACTCCTCTTCGACGTCGTGTACCACGGGGAGCACACCTGCGATCTGCAGAGCACGCACTCCAACGACGTCGAACCGATCAGGCCGCAGTCTGGGCTCGACGACGACATGTGTACCGACGATACGACGACTGTCTCCACACGCCACGACAGCAACACGGATGCGTCCTCAATTAGTTTTCAATTAGATTGGACCAATTGCAAAGACGAATCGGATGGCCCTCCCACCACCCTATAAAGAACAAACCTTGCATACATTACGTGTGCGAATTCACGGATATGTATCTTTAGTGTATTTTTTACACACATTTGACATTTGTCTTGTTCAATATTTTTACGTAAACTATGTGAAAATGTACGTCGTACTCAAATTATACCTTTAATGATAAACCAAGAACAAAATAAATAATAATTTTTTTCATTTTTGAA
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CDS seq | ATGGGTGTATTAAAAGTTGGGGCTTATATAAATCTCTGCATACTACATAACAGGAAGGAACCACAGATGGAAAGAAGGAAGGTGATCAGGATGAGTTATACAGAGGATGACGGCTTCAGCTGGAGGAAGTACGGGCAGAAGGACGTGGAAGGCGCCATGCACCCAACTACCCAAAGTAATTATTTCCGATGTGCCCACAAGATGACGACGGGCTGTAAGGCACGGAAGAAGGTGCAGCGCACCGACGGCGACCCGCTGATGGTCGACGTCGTATACAAGGGGGTTCACAGCTGTGCCGGCGTGCATTCCGACAGCCAGAGATCATCCGCCGCGAGCTCTAAGTCTAACCTGCGGCCGACGAAGAGCATGCAGGTGAGGGCGAGCTCCAAGGACGTCGGCCCCCCAGACGACGGTTACAGCTGGAAGAGGTACGGCCAGAAGAACATCTTCGGCGCTAATTACCCAAGATGCTACTACCGGTGTATACACAAGACCACGACGGGCTGCACTGCGACAAAAAATGCACAGGCCACCGATGGTGACCCACTCCTCTTCGACGTCGTGTACCACGGGGAGCACACCTGCGATCTGCAGAGCACGCACTCCAACGACGTCGAACCGATCAGGCCGCAGTCTGGGCTCGACGACGACATGTGTACCGACGATACGACGACTGTCTCCACACGCCACGACAGCAACACGGATGCGTCCTCAATTAGTTTTCAATTAGATTGGACCAATTGCAAAGACGAATCGGATGGCCCTCCCACCACCCTATAA
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Protein seq | MGVLKVGAYINLCILHNRKEPQMERRKVIRMSYTEDDGFSWRKYGQKDVEGAMHPTTQSNYFRCAHKMTTGCKARKKVQRTDGDPLMVDVVYKGVHSCAGVHSDSQRSSAASSKSNLRPTKSMQVRASSKDVGPPDDGYSWKRYGQKNIFGANYPRCYYRCIHKTTTGCTATKNAQATDGDPLLFDVVYHGEHTCDLQSTHSNDVEPIRPQSGLDDDMCTDDTTTVSTRHDSNTDASSISFQLDWTNCKDESDGPPTTL |
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Function | Probable WRKY transcription factor 26 [UniProtKB/Swiss-Prot:Q9C5T3] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
LOC_Os11g45850 | LOC_Os11g45850.1 | Chr11 | 27740142 | 27741375 | + | MSU_osa1r7 | ||
CDS seq | ATGGGTGTATTAAAAGTTGGGGCTTATATAAATCTCTGCATACTACATAACAGGAAGGAACCACAGATGGAAAGAAGGAAGGTGATCAGGATGAGTTATACAGAGGATGACGGCTTCAGCTGGAGGAAGTACGGGCAGAAGGACGTGGAAGGCGCCATGCACCCAACTACCCAAAGTAATTATTTCCGATGTGCCCACAAGATGACGACGGGCTGTAAGGCACGGAAGAAGGTGCAGCGCACCGACGGCGACCCGCTGATGGTCGACGTCGTATACAAGGGGGTTCACAGCTGTGCCGGCGTGCATTCCGACAGCCAGAGATCATCCGCCGCGAGCTCTAAGTCTAACCTGCGGCCGACGAAGAGCATGCAGGTGAGGGCGAGCTCCAAGGACGTCGGCCCCCCAGACGACGGTTACAGCTGGAAGAGGTACGGCCAGAAGAACATCTTCGGCGCTAATTACCCAAGATGCTACTACCGGTGTATACACAAGACCACGACGGGCTGCACTGCGACAAAAAATGCACAGGCCACCGATGGTGACCCACTCCTCTTCGACGTCGTGTACCACGGGGAGCACACCTGCGATCTGCAGAGCACGCACTCCAACGACGTCGAACCGATCAGGCCGCAGTCTGGGCTCGACGACGACATGTGTACCGACGATACGACGACTGTCTCCACACGCCACGACAGCAACACGGATGCGTCCTCAATTAGTTTTCAATTAGATTGGACCAATTGCAAAGACGAATCGGATGGCCCTCCCACCACCCTATAA
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Protein seq | MGVLKVGAYINLCILHNRKEPQMERRKVIRMSYTEDDGFSWRKYGQKDVEGAMHPTTQSNYFRCAHKMTTGCKARKKVQRTDGDPLMVDVVYKGVHSCAGVHSDSQRSSAASSKSNLRPTKSMQVRASSKDVGPPDDGYSWKRYGQKNIFGANYPRCYYRCIHKTTTGCTATKNAQATDGDPLLFDVVYHGEHTCDLQSTHSNDVEPIRPQSGLDDDMCTDDTTTVSTRHDSNTDASSISFQLDWTNCKDESDGPPTTL
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 2.649270 | 3.557142 | 0.628586 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0685700 | RBH | 4.160795 | 6.968955 | 2.811965 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45920 | RBH | 0.000000 | 0.279270 | 0.000000 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0685700 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024360 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024210 | SBH | 0.198599 | 2.936731 | 2.884382 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023820 | SBH | 0.0 | 2.615624 | 1.016197 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023590 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024150 | SBH | 0.000000 | 0.0 | 2.616568 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0438300 | SBH | 0.0263225 | 0.032052 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024500 | RBH | 0.0 | 0.0 | 0.116773 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0436800 | SBH | 0.2076495 | 11.592792 | 0.0196965 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024390 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024400 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023650 | SBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024030 | SBH | 0.085596 | 5.207169 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024040 | SBH | 0.255130 | 2.098425 | 0.721376 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024250 | SBH | 0.721625 | 24.082403 | 3.023135 |