Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0024390 | OGI:11081570 | 9/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:30310183-30310544 | ||||||||
| Gene Symbol | WRKY61, OsWRKY61, OsWRKY103, WRKY103 | ||||||||||
| DNA seq | atgaactggcactgctgctggagtacatgaaatcgaactgatctcgctcgccatctattttgcagatgctactaccggtgtatacacaaaaaatgcacaggccaccgatggtgacccactcctcttcgacgtcgtgtaccacggggagcacacctgcgatctgcagagcacgcactccaacgacgtcgaaccgatcaggccgcagtctgggctcgacgacgacatgtgtaccgacgatacgacgactgtctccacacgccacgacagcaacacggatgcgtcctcaattagttttcaattagattggaccaattgcaaagacgaatcggatggccctcccaccaccctataaagaacaaacc |
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| CDS seq | atgaactggcactgctgctggaatgctactaccggtgtatacacaaaaaatgcacaggccaccgatggtgacccactcctcttcgacgtcgtgtaccacggggagcacacctgcgatctgcagagcacgcactccaacgacgtcgaaccgatcaggccgcagtctgggctcgacgacgacatgtgtaccgacgatacgacgactgtctccacacgccacgacagcaacacggatgcgtcctcaattagttttcaattagattggaccaattgcaaagacgaatcggatggccctcccaccaccctataa |
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| Protein seq | MNWHCCWNATTGVYTKNAQATDGDPLLFDVVYHGEHTCDLQSTHSNDVEPIRPQSGLDDDMCTDDTTTVSTRHDSNTDASSISFQLDWTNCKDESDGPPTTL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0024390 | OsLima_11g0024390.01 | Chr11 | 30310183 | 30310544 | + | NAM | ||
| CDS seq | atgaactggcactgctgctggaatgctactaccggtgtatacacaaaaaatgcacaggccaccgatggtgacccactcctcttcgacgtcgtgtaccacggggagcacacctgcgatctgcagagcacgcactccaacgacgtcgaaccgatcaggccgcagtctgggctcgacgacgacatgtgtaccgacgatacgacgactgtctccacacgccacgacagcaacacggatgcgtcctcaattagttttcaattagattggaccaattgcaaagacgaatcggatggccctcccaccaccctataa
More
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| Protein seq | MNWHCCWNATTGVYTKNAQATDGDPLLFDVVYHGEHTCDLQSTHSNDVEPIRPQSGLDDDMCTDDTTTVSTRHDSNTDASSISFQLDWTNCKDESDGPPTTL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0685700 | RBH | 4.160795 | 6.968955 | 2.811965 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45850 | RBH | 2.649270 | 3.557142 | 0.628586 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0685700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024360 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024210 | SBH | 0.198599 | 2.936731 | 2.884382 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023590 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024150 | SBH | 0.000000 | 0.0 | 2.616568 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0438400 | SBH | 0.0861995 | 0.1629875 | 0.368956 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024500 | SBH | 0.0 | 0.0 | 0.116773 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024420 | RBH | 0.0 | 0.182665 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024400 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
