Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0685700 | OGI:11081570 | 9/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:27740507-27741184 | ||||||||
| Gene Symbol | WRKY61, OsWRKY61, OsWRKY103, WRKY103 | ||||||||||
| DNA seq | ATGACGACGGGCTGTAAGGCACGGAAGAAGGTGCAGCGCACCGACGGCGACCCGCTGATGGTCGACGTCGTATACAAGGGGGTTCACAGCTGTGCCGGCGTGCATTCCGACAGCCAGAGATCATCCGCCGCGAGCTCTAAGTCTAACCTGCGGCCGACGAAGAGCATGCAGGTGAGGGCGAGCTCCAAGGACGTCGGCCCCCCAGACGACGGTTACAGCTGGAAGAGGTACGGCCAGAAGAACATCTTCGGCGCTAATTACCCAAGGTTAGTGGCTGATTAACGTACGACTGTACCTGAAATGAACTGGCACTGCTGCTGGAGTACATGAAATCGAACTGATCTCGCTCGCCATCTATTTTGCAGATGCTACTACCGGTGTATACACAAGACCACGACGGGCTGCACTGCGACAAAAAATGCACAGGCCACCGATGGTGACCCACTCCTCTTCGACGTCGTGTACCACGGGGAGCACACCTGCGATCTGCAGAGCACGCACTCCAACGACGTCGAACCGATCAGGCCGCAGTCTGGGCTCGACGACGACATGTGTACCGACGATACGACGACTGTCTCCACACGCCACGACAGCAACACGGATGCGTCCTCAATTAGTTTTCAATTAGATTGGACCAATTGCAAAGACGAATCGGATGGCCCTCCCACCACCCTATAA
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| CDS seq | ATGACGACGGGCTGTAAGGCACGGAAGAAGGTGCAGCGCACCGACGGCGACCCGCTGATGGTCGACGTCGTATACAAGGGGGTTCACAGCTGTGCCGGCGTGCATTCCGACAGCCAGAGATCATCCGCCGCGAGCTCTAAGTCTAACCTGCGGCCGACGAAGAGCATGCAGGTGAGGGCGAGCTCCAAGGACGTCGGCCCCCCAGACGACGGTTACAGCTGGAAGAGGTACGGCCAGAAGAACATCTTCGGCGCTAATTACCCAAGATGCTACTACCGGTGTATACACAAGACCACGACGGGCTGCACTGCGACAAAAAATGCACAGGCCACCGATGGTGACCCACTCCTCTTCGACGTCGTGTACCACGGGGAGCACACCTGCGATCTGCAGAGCACGCACTCCAACGACGTCGAACCGATCAGGCCGCAGTCTGGGCTCGACGACGACATGTGTACCGACGATACGACGACTGTCTCCACACGCCACGACAGCAACACGGATGCGTCCTCAATTAGTTTTCAATTAGATTGGACCAATTGCAAAGACGAATCGGATGGCCCTCCCACCACCCTATAA
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| Protein seq | MTTGCKARKKVQRTDGDPLMVDVVYKGVHSCAGVHSDSQRSSAASSKSNLRPTKSMQVRASSKDVGPPDDGYSWKRYGQKNIFGANYPRCYYRCIHKTTTGCTATKNAQATDGDPLLFDVVYHGEHTCDLQSTHSNDVEPIRPQSGLDDDMCTDDTTTVSTRHDSNTDASSISFQLDWTNCKDESDGPPTTL |
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| Function | Probable WRKY transcription factor 53 [UniProtKB/Swiss-Prot:Q9SUP6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0685700 | OsNip_11t0685700-00 | Chr11 | 27740507 | 27741184 | + | RAP2018-11-26 | ||
| CDS seq | ATGACGACGGGCTGTAAGGCACGGAAGAAGGTGCAGCGCACCGACGGCGACCCGCTGATGGTCGACGTCGTATACAAGGGGGTTCACAGCTGTGCCGGCGTGCATTCCGACAGCCAGAGATCATCCGCCGCGAGCTCTAAGTCTAACCTGCGGCCGACGAAGAGCATGCAGGTGAGGGCGAGCTCCAAGGACGTCGGCCCCCCAGACGACGGTTACAGCTGGAAGAGGTACGGCCAGAAGAACATCTTCGGCGCTAATTACCCAAGATGCTACTACCGGTGTATACACAAGACCACGACGGGCTGCACTGCGACAAAAAATGCACAGGCCACCGATGGTGACCCACTCCTCTTCGACGTCGTGTACCACGGGGAGCACACCTGCGATCTGCAGAGCACGCACTCCAACGACGTCGAACCGATCAGGCCGCAGTCTGGGCTCGACGACGACATGTGTACCGACGATACGACGACTGTCTCCACACGCCACGACAGCAACACGGATGCGTCCTCAATTAGTTTTCAATTAGATTGGACCAATTGCAAAGACGAATCGGATGGCCCTCCCACCACCCTATAA
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| Protein seq | MTTGCKARKKVQRTDGDPLMVDVVYKGVHSCAGVHSDSQRSSAASSKSNLRPTKSMQVRASSKDVGPPDDGYSWKRYGQKNIFGANYPRCYYRCIHKTTTGCTATKNAQATDGDPLLFDVVYHGEHTCDLQSTHSNDVEPIRPQSGLDDDMCTDDTTTVSTRHDSNTDASSISFQLDWTNCKDESDGPPTTL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.160795 | 6.968955 | 2.811965 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0686250 | RBH | 0.223130 | 0.000000 | 0.881855 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45850 | RBH | 2.649270 | 3.557142 | 0.628586 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0685700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024360 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024210 | SBH | 0.198599 | 2.936731 | 2.884382 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023820 | SBH | 0.0 | 2.615624 | 1.016197 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023590 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024150 | SBH | 0.000000 | 0.0 | 2.616568 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0438300 | RBH | 0.0263225 | 0.032052 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024500 | RBH | 0.0 | 0.0 | 0.116773 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0436800 | SBH | 0.2076495 | 11.592792 | 0.0196965 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024390 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024400 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0001200 | SBH | 4.254130 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023650 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024030 | SBH | 0.085596 | 5.207169 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024040 | SBH | 0.255130 | 2.098425 | 0.721376 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024250 | SBH | 0.721625 | 24.082403 | 3.023135 |
