Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os11g45920 OGI:11081570 | 9/16 Nipponbare | IRGSP 1.0 | MSU Chr11:27779324-27785982
Gene Symbol WRKY63, OsWRKY63
DNA seq

TCAGCTGCCAGGGGCCCAGTGCCATCGCCCTGCCCCAGGGCCGGGCCTGGAGGCAACATCTTCTCCGTCCATGCTGTCCGTCGTCTTTACGGAGGTGACTGTTACGAACCCTAGATCGAATCACAGATGAAATTGGGGATGAGAAGGAAGAACAGAACAGAACAGAGCATTTCAGAGTAGAGGAAAAAGGAAGCAGAGTTAGGAGGAGGAATGATTTTCTTCAGATAGAAGTTTTGATTCAATTACAACGCACGCCTCTAGAAGATCCTTCTAGTATTTATAGACTTCCTCAACCAGTAACCCAATCACAGCCCATATACTTTGGGTTGGTGTGGACTTCTCGTTTGGATCTTCTAGGCCCAATGATACTAGAGTTATGGGTAGTGCTCTGTATTGATGCAGTAACATTCCTCCCTCCTTGAGTTTCAGCCTGTCCCCAGGCTGGTGCAGCTGGAAACTTAGCTTGCATTTCATCTAAACTCTCCCAGGTGTCAGCAGAAGAAGACACACCGGACCAACGAATTAAAACTTGCTTGATCATCTTGGAACCTCGACGAATCGAACAATGATCCAGAATTTTGATTGGAATTGCCAAATGACCAGCATCAGGATTTAACACAGGCAAAGAAGGCTGAACTGCTTCAGATGGTGCGAGAGCCTTCTTGAGCTGAGACACATGGACAACAGGGTGTATCAAGCTGTGAGCAGGCAATTGTAACCTGTAAGCCACCGATCCAATTCGTTGTAAGACTTGAAATGGACCATAATATTTGAAGGATAACTTCCTGTTAGAGCGAGTCATAAATGATTGTTGAATATATGGTTGTAATTTCATGAACACCCAATCACCAACCACAAAACAACGCTCAGATCGCTTCAAATCAGCTTGGCTCTTCATCCGTTGCTGAGCTCGCAACAAATGATGATGAATCAAAGTATTCATGTCATTTCGCTCACTTAACCAAGTTGCAAGATCTCCAGGAGCATCAACAGAGGAGGTGGATAATCCAAAGTAACGAGGTTTGTGTCCAAATAATACTTCAAAAGGAGTCATACCCAAGGCTGAATGAAATGACGTATTGTACCAATATTGAGCCAAGGCCAGCCAATGCTTCCACCGAGAAGGACAAGAATGAACAAAGCAGCGCAAAAACATTTCCACACATTGATTCACACGCTCAGTTTGTCCATCCGATTGTGGGTGATACGACGAACTCATTCGGAGTTGAGTACCAGCTCGGCGAAACAATTCCTTCCAAAGAGAACTAGTGAACACTCGATCACGGTCAGATACAATAGCTTGAGGTAAACCATGTATACTGTGTATGTGTTCCATGAAAAGCTGAGCCACTCCAAAGGCAGTAAAGGGGTGTTTCAGGGGTAAAAAATGAGCAAACTTAGAGAATTTATCCACAATAACCAGTATACAGTCAAATGAAGCTGATTTGGGTAAACCTTCAATAAAATCCATAGTAATTACTTGCCATGACTGAGAAGGTACCTCCAATGGCTGCAATAACCCTGGGTATTTAACATGTTCAGATTTAGCTCTTTGACAAATATCACAATGTTGAACAAACTCCTGAACATCTTTGCGCATGCCTGGCCAAGAGAACAACTGCTTAACTCTTTGATAAGTAACCAAAATTCCTGAATGACCCCCCACTGCTGCAGTATGTAAATTGGCCAGAATCTTTTGTTGCAAAAGTTTATTATGACCAATCCAGATTCTATGTTTAAAATACAAAATGCCATTCTGCACTTCAAAGTTAGATGGACCTGCACCTGACACAGATAAAGCTTGAAGTAATTTCTGAGCCTCCGAGTCAGATTGATAACCATCAATTAGCTCCTGTAGCCAGTCCGGCAAACATATAGAAATGGCAGACACTTCCTCCAAACCATCAGATTGTCGACGAGATAATGCATCAGCAGCCCCATTCTCCAATCCTTTCTTATAACAGATTTTATACCTCAGACCTAAAAGTTTAGTCAAAGCTTTTTGTTGCCAAGGGGTCGACAATCTCTGATTTGTTAGAAAAGATAGACTGCGATGATCCGTTCTAATCACAAACTCGTCATGTTGCAAATAAGAACGCCAATGATCAATTGCTAACATGATTGCAAGACTCTCCTTTTCATAGGTAGACAAGCCTTGAGTGCGAGGTCCAAGTGCTTTACTGAGAAATGCAATGGGATGACCATTTTGCATAAGAACAGCTCCAATCCCTTTGTCCGATGCATCCGTTTCAACAACAAAAGGTTGCTGAAAATTAGGTAAAGCCAATACAGGAGCTTCAATCAAAGCAGTCTTGAGGGCTACAAAAGCCTCCTGAGTAACAGAAGTCCATTGAAACAATACCCCTTTTCGTAGCAAATTGGTTAATGGTTTACAAATAACACCATAATTTCTGACAAACTTGCGATAGTAACCAAGTTAATCCCAAAAAACTACGCAAGTCTTTGACAGAAAGAGGAGTGGGCCAATCCTTGACAGCAATAATTTTCTCCTCATCAGTAGCTACCCCCTGAGCACTAATAATGTGACCCAAATAAGCCAAACTTTGTTGAGCAAAAGAACATTTGGAGAGTTTAACCTTCAATTGGTGATGTGTCAAGGTGCTTAAAACTTGTCTCAGATGATTCTTATGCTCTTCCAAAGAACGGCTGTAAACTAAGATGTCATCAACAAAGACCAAGACAGACTGACGCAATTGAGCTGCTAAAACAGAATTCATAACACCCTGAAAAGTGGCTGGAGCACTGGTAAGACCAAAAGGAAGAACTCTGAACTCAAAATGGCCATTGTGGGTCTTAAATGCAGTCTTATGTTCATCCTGAGGAGCCATGCGAATCTGATGATATCCCGAGCGCAAATCTAACTTAGAAAACCAACAAGCACCCGCCAATTCGTCCAATAATTCATCAATAACAGGTAAAGGGTATTTATTCTTGATGGTTATGGCATTGAGATGTCGGTAATCCACACAAAAACGCCATGTGCCATCTTTTTTCTTAACCAACAACACAGGAGAAGAAAAAGGGCTGGAACTAGGACGAATGATACCTTTTTTCAACATTTCCTGAACTTGTTTTTCAATTTCATTCTTCTGATCAGGTGTATAACGATATGGACGAATGTTGACTGGTTGTGCTCCAGCAATCAAAGGAATAGTGTGATCATAAGATCGAGAAGGTGGCAACCCGTCTGGTTCATTAAAAATGTCAGCAAATTCATCCAAAATGGACTGAATTGAACTTGGAACATTTTGAGAAGAACTAGAGCCGTCACTGGCAGTGAGCTGAACCAAGGACTCCACAGCTCCTTGATTGTGCAACAGCTGTAACTGATGAATAGAGACCAGATCACATTTATCCAATTCAGGTACCACTCCTTTAAGTTCCACTGACTTATCATGAAGACCAAACTGAATTGTTTTGGCCTGCCAATTGATATCCATTGGACTATATTTCTCTAACCAGTCCATACCCAAGATCATATCATAATTGTCCAAAGGAAGCAGTTTGAAATCAGTAGAGAACTGATGCCCTTGAACCTCCCATTTTGCAGCCGGCAACTCAGAGGTACAAGAAAGAACAGCACCATTGGCTACCTTTACTTGAACCGGAGTAAGTAAAGATTTCACACCAGTAAGATGAGGTAAAACCACTGAACTGAGAAAACTGCAAGAGCTGCCTGAATCCACCAAAATTAACACATCAAAGCCTTGAATGGACCCTTGTAATCGCAAAGTATGTGCAGAAACCGTGCCTTGAATGGCCTGTAAAGAAATAGCCATCAGACTAGAGGTAGAATCAGCATCCTGTTCACCCTCAGAAACATCAGCTGCCAAAACACTGAAGAGTTCTTGAACAGCATGTAACTGTACTGATCCTGAACACTTGTGAGTAGGAGACCATTTTTCAGCACAAACATAGCAAAGACCTTGAGCTCGTCGATAGGCCTTGAGAGCAACCAATTTATCAGAAGAATTGGCCACTTTAGGAACTTCAGCTGTTCTTTTATCATCTCCCTTGCCAGCATGCACAAATTTGGGTGGTGGTAAAGGTAAAGGGTAAGCACTTTTAATTCGAGCAGCGTGATCACCCAATTTCTTCCCATCCTTGGACACCAAAGATGGGAAGAAATTAACAGTGCTCAAGGTTGGATCATAAACTAACAACTGACTCCACAAATCATCAAAACGCTCATAATACTCATTCACCGACCCTAACTGCTTGAGTTGATCAATCTGACGAACAAGCTGAAGGTGTCTATTCCTATCAAACTTCCTATCCACCGTATCACAAAAAACTCCCCAATTCCCACAAAGCAAATGAGCTCGCGAAGAACGTAACCAAGATGCAGCTCGACCAATGAAATAAATGGTAGCTACTCTAACCCATAAATCTGGATGAGTGCCATAAACCCCAAAATAATGTTCACATCTTAAACGCCAATTCTGAGGATCACTGCCATCAAATTGGGGAAAATCCAATTTTGGCAATCTGTGATTGTACCCACGCCCCTCTGATCCCCCACTCTCCTCGCGACCAACAAACTCCGAAAAATTTGGATGAACACGAGGAGAAAATGGTAGAGAGTGCGTACCCTTGCCCGGAGGTGGGACGAGAGTAGTGACTACCCCCGATGCCCTCCCCCGGAACTGAGTTGAAATGCGGTGGCCATCCAGACCAATTTCGCCAGTCGAGGCTGGCATAGACGCGGTTGGCGGCGTCGGCAACAGAGGTGCGCGACGAGCAATTTCCTCCCGCTCCTCCAACGCCTGCGATACTGGCAGAGACATGGTTGGCGACGTCGGCAACTGAGATGTGCGACGAGCAATTTCCTCCCGCTCCTCCAACGCCTGCGAGGTGTTCGACGATTTGTCAGCTTCCGCTTGATGTCGCTCCACCGCACCGACTTGATTTCTCTGCAACTCCATGTCGCGCTGCAAGCTCTGCACCGCAGCATCAACCTGAGGTCGCCAACTTGAAATGGATTTCTCCATTTTGTTCATCGTCTCCTGCACCTCGCCTTGCTTCACCGACATGGCGCCGATCGCCTCCTGAATACTGGACAGCATCTTCCTGAAGCCTTCGTGCTGCTTCTCCATGGCGTCCACTTGACCTTGCAAACGCGTCTTGAATGTCGGCCGCTCCAGGATCGTGCTCTGATACCAAGATGTTACGAACCCTAGATCGAATCACAGATGAAATTGGGGATGAGAAGGAAGAACAGAACAGAACAGAGCATTTCAGAGTAGAGGAAAAAGGAAGCAGAGTTAGGAGGAGGAATGATTTTCTTCAGATAGAAGTTTTGATTCAATTACAACGCACGCCTCTAGAAGATCCTTCTAGTATTTATAGACTTCCTCAACCAGTAACCCAATCACAGCCCATATACTTTGGGTTGGTGTGGACTTCTCGTTTGGATCTTCTAGGCCCAATGATACTAGAGTTATGGGTAGTGCTCTGTATTGATGCAGTAACAGTGACAGTGGAGCTCTGCTCGAGCCCGGATTGCGGTGTGAGCGGTTGCTCTGGGCTTACGGCAGGCGGCCATAATGTGACCTGTACTTGGTCGCTGGAGTGCGCTGCCTGAGGCTGATCAGCGCAGGTGTGCTCACCAAAGTATGTGACGTCGAAGAGCAAGCCGTCGTCGTGGCGCTGCACTTGCTTGGACGCCTGGCAGCCCTTGGTGGCACACCTGTAGTAACCCCTGTGCGCAAGTGTTCGATGGATGGATGGATTTATATTAGCCAGTTTAAATCTCGATCATGCACATGCAATCAGTACGTTTCAGAGATGCTGCAGTGAGTCGATCGATCGACCGTCGTATAGTAAGCCACTGACCTTAGGTAACTGAAGCCGAGGACGTTCTTCTGCCCGTACTTCCTCCAGCTGTAGCCGTCATCCGCCGGCACGGAGGTCACCCTCACTTGCCTTTTCCTCTTCGTTCTCTTTACCTTCTTGTCTCGCGTTCGCGTTAATCTGATCTGTTCGTCGACATTGGACTCCGCGGTCTGAGTGCAAGTGTGCTCACCGTGGTATACGATGTCGAACATGAGGGGGTCACCGTCGTCGCGCTGCACCTCCTTGGTCGCCATGCATCCCTTCTTCGTGTTCCAGTGTGTGCACCGGAAATAAGCTCTGCAATTAAGTGTTAAGACTATAAGCGTACACACATATACTACTACTTCCGCCTTATTAAAATATTGCTACCTAGTATGACCAGCTGCTGTGTGTACTAGGTTTTTTTTTATTGAAAAAAAGGAATACATGATTAAAAAATTTATTCTCTAGAAAGTATCCAATCATGTACTAGGTAATAATATTTTAAAACAGAGATAGTAGTAGTGTTTTCTCTATCCCAAAATGTTGCAACCAATGATAAGATTTAAGGGATTTATTCACCTTAGAGCAACCTTTGTTGTTTTAGGATTGGCAAATCCTATTTTAGGTTAGTAATATTTTAGGACGGAAAAAATTGTACATGTATACACAGCTGCGAGTATGTGCCAGTAAAAGTTTTAGGTGCCGTCATTGTTACCCACCCCACCCACTGACCTTGGGAACTTGGCGCCGAGGATCTCCTTCTGCTCGTACTTACTCCAGCTGAGGCCGTCATCCTCCGTATTACTCCTCACATGCCACAT

More
CDS seq

ATGTGGCATGTGAGGAGTAATACGGAGGATGACGGCCTCAGCTGGAGTAAGTACGAGCAGAAGGAGATCCTCGGCGCCAAGTTCCCAAGAGCTTATTTCCGGTGCACACACTGGAACACGAAGAAGGGATGCATGGCGACCAAGGAGGTGCAGCGCGACGACGGTGACCCCCTCATGTTCGACATCGTATACCACGGTGAGCACACTTGCACTCAGACCGCGGAGTCCAATGTCGACGAACAGATCAGATTAACGCGAACGCGAGACAAGAAGGTAAAGAGAACGAAGAGGAAAAGGCAAGTGAGGGTGACCTCCGTGCCGGCGGATGACGGCTACAGCTGGAGGAAGTACGGGCAGAAGAACGTCCTCGGCTTCAGTTACCTAAGGGGTTACTACAGGTGTGCCACCAAGGGCTGCCAGGCGTCCAAGCAAGTGCAGCGCCACGACGACGGCTTGCTCTTCGACGTCACATACTTTGGTGAGCACACCTGCGCTGATCAGCCTCAGGCAGCGCACTCCAGCGACCAAAGCACGATCCTGGAGCGGCCGACATTCAAGACGCGTTTGCAAGGTCAAGTGGACGCCATGGAGAAGCAGCACGAAGGCTTCAGGAAGATGCTGTCCAGTATTCAGGAGGCGATCGGCGCCATGTCGGTGAAGCAAGGCGAGGTGCAGGAGACGATGAACAAAATGGAGAAATCCATTTCAAGTTGGCGACCTCAGGTTGATGCTGCGGTGCAGAGCTTGCAGCGCGACATGGAGTTGCAGAGAAATCAAGTCGGTGCGGTGGAGCGACATCAAGCGGAAGCTGACAAATCGTCGAACACCTCGCAGGCGTTGGAGGAGCGGGAGGAAATTGCTCGTCGCACATCTCAGTTGCCGACGTCGCCAACCATGTCTCTGCCAGTATCGCAGGCGTTGGAGGAGCGGGAGGAAATTGCTCGTCGCGCACCTCTGTTGCCGACGCCGCCAACCGCGTCTATGCCAGCCTCGACTGGCGAAATTGGTCTGGATGGCCACCGCATTTCAACTCAGTTCCGGGGGAGGGCATCGGGGGTAGTCACTACTCTCGTCCCACCTCCGGGCAAGGGGTTCGTAACAGTCACCTCCGTAAAGACGACGGACAGCATGGACGGAGAAGATGTTGCCTCCAGGCCCGGCCCTGGGGCAGGGCGATGGCACTGGGCCCCTGGCAGCTGA

More
Protein seq

MWHVRSNTEDDGLSWSKYEQKEILGAKFPRAYFRCTHWNTKKGCMATKEVQRDDGDPLMFDIVYHGEHTCTQTAESNVDEQIRLTRTRDKKVKRTKRKRQVRVTSVPADDGYSWRKYGQKNVLGFSYLRGYYRCATKGCQASKQVQRHDDGLLFDVTYFGEHTCADQPQAAHSSDQSTILERPTFKTRLQGQVDAMEKQHEGFRKMLSSIQEAIGAMSVKQGEVQETMNKMEKSISSWRPQVDAAVQSLQRDMELQRNQVGAVERHQAEADKSSNTSQALEEREEIARRTSQLPTSPTMSLPVSQALEEREEIARRAPLLPTPPTASMPASTGEIGLDGHRISTQFRGRASGVVTTLVPPPGKGFVTVTSVKTTDSMDGEDVASRPGPGAGRWHWAPGS

Function Probable WRKY transcription factor 41 [UniProtKB/Swiss-Prot:Q8H0Y8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os11g45920 LOC_Os11g45920.1 Chr11 27779324 27785982 - MSU_osa1r7
CDS seq

ATGTGGCATGTGAGGAGTAATACGGAGGATGACGGCCTCAGCTGGAGTAAGTACGAGCAGAAGGAGATCCTCGGCGCCAAGTTCCCAAGAGCTTATTTCCGGTGCACACACTGGAACACGAAGAAGGGATGCATGGCGACCAAGGAGGTGCAGCGCGACGACGGTGACCCCCTCATGTTCGACATCGTATACCACGGTGAGCACACTTGCACTCAGACCGCGGAGTCCAATGTCGACGAACAGATCAGATTAACGCGAACGCGAGACAAGAAGGTAAAGAGAACGAAGAGGAAAAGGCAAGTGAGGGTGACCTCCGTGCCGGCGGATGACGGCTACAGCTGGAGGAAGTACGGGCAGAAGAACGTCCTCGGCTTCAGTTACCTAAGGGGTTACTACAGGTGTGCCACCAAGGGCTGCCAGGCGTCCAAGCAAGTGCAGCGCCACGACGACGGCTTGCTCTTCGACGTCACATACTTTGGTGAGCACACCTGCGCTGATCAGCCTCAGGCAGCGCACTCCAGCGACCAAAGCACGATCCTGGAGCGGCCGACATTCAAGACGCGTTTGCAAGGTCAAGTGGACGCCATGGAGAAGCAGCACGAAGGCTTCAGGAAGATGCTGTCCAGTATTCAGGAGGCGATCGGCGCCATGTCGGTGAAGCAAGGCGAGGTGCAGGAGACGATGAACAAAATGGAGAAATCCATTTCAAGTTGGCGACCTCAGGTTGATGCTGCGGTGCAGAGCTTGCAGCGCGACATGGAGTTGCAGAGAAATCAAGTCGGTGCGGTGGAGCGACATCAAGCGGAAGCTGACAAATCGTCGAACACCTCGCAGGCGTTGGAGGAGCGGGAGGAAATTGCTCGTCGCACATCTCAGTTGCCGACGTCGCCAACCATGTCTCTGCCAGTATCGCAGGCGTTGGAGGAGCGGGAGGAAATTGCTCGTCGCGCACCTCTGTTGCCGACGCCGCCAACCGCGTCTATGCCAGCCTCGACTGGCGAAATTGGTCTGGATGGCCACCGCATTTCAACTCAGTTCCGGGGGAGGGCATCGGGGGTAGTCACTACTCTCGTCCCACCTCCGGGCAAGGGGTTCGTAACAGTCACCTCCGTAAAGACGACGGACAGCATGGACGGAGAAGATGTTGCCTCCAGGCCCGGCCCTGGGGCAGGGCGATGGCACTGGGCCCCTGGCAGCTGA

More
Protein seq

MWHVRSNTEDDGLSWSKYEQKEILGAKFPRAYFRCTHWNTKKGCMATKEVQRDDGDPLMFDIVYHGEHTCTQTAESNVDEQIRLTRTRDKKVKRTKRKRQVRVTSVPADDGYSWRKYGQKNVLGFSYLRGYYRCATKGCQASKQVQRHDDGLLFDVTYFGEHTCADQPQAAHSSDQSTILERPTFKTRLQGQVDAMEKQHEGFRKMLSSIQEAIGAMSVKQGEVQETMNKMEKSISSWRPQVDAAVQSLQRDMELQRNQVGAVERHQAEADKSSNTSQALEEREEIARRTSQLPTSPTMSLPVSQALEEREEIARRAPLLPTPPTASMPASTGEIGLDGHRISTQFRGRASGVVTTLVPPPGKGFVTVTSVKTTDSMDGEDVASRPGPGAGRWHWAPGS

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.279270 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0686250 RBH 0.223130 0.000000 0.881855
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g45850 RBH 2.649270 3.557142 0.628586
Nipponbare | IRGSP 1.0 | RAP-db Os11g0686250 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0024380 SBH 0.099646 2.008879 0.759783
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0024210 SBH 0.198599 2.936731 2.884382
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0023820 SBH 0.0 2.615624 1.016197
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0023590 SBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0024150 RBH 0.000000 0.0 2.616568
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0438400 SBH 0.0861995 0.1629875 0.368956
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0024510 RBH 0.0 0.276882 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0436800 SBH 0.2076495 11.592792 0.0196965
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024420 RBH 0.0 0.182665 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024430 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023650 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0024030 SBH 0.085596 5.207169 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G024040 SBH 0.255130 2.098425 0.721376
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0024250 SBH 0.721625 24.082403 3.023135
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.