Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os07g42400 OGI:07006270 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr07:25371994-25376165
Gene Symbol GATA23, OsGATA23, OsGATA23a, OsGATA23b
DNA seq

GTGGCACCACACGGTGGGTCACATGCCCCCCAACGCCGCATCGGATCCGACCACCTCCTGGGCTCCTCTCTCCACTACCAACCTCTCGCGGAGACCCAAACCCTAGCTCCCAAATCCCGACCAGCCGAAGCATTTCCAACGGAATTCCTCTGTTCGGCTCCTCCTCGGGGTTCAAATCGAGCTTGAATTTGTGGTTTTTTTTGGGGAGGGTTTTTTTTTTCTTTTTGGTGTTGTTTTTGGATGCGAGTGTGGCTTGGCAGGGTTGGTGGTGGTGATGCCATGATGCACATGCTGGTGGCCCCCGATGGAGGCGGCGGAGGGGAGATGCCGCCGCCGTACGGGGGAGCCGCGGCGGCGCCGCCGCCGCCGATGGAGCAGGAGCTGGAGCTCCACCGCGACAACGCCGACGACGGCCTCGACGGCCACGTGCGGTGAGAGCTTCTCTCTGTGTGTGTGTGGCAAGTCACTTGTGTTCATGAGTTCATCGGCGGTGAGGAGGTGGGCGAGGTCTCGTAGCGTCTCGCCTTTGCGTGGTATTCGGGGTTCATCCATTCTGGCGTGCTCTGGTTTAAGCTCAGAAGATTTTGTTTGTCCTGTTGCACGAGTGAATTTTAGTAAAAGAACCTTGGGCTTTCCATTTGTCGTGTTGATAGTTTTACTGTGTTTGGCCAGGTGCTTGAGGTGTGGTATATCCGGCAACGCGACGCCCCATATGCGCCGCGGCCCTGATGGCCCAAGAACTCTCTGTAATGCGTGCGGCATTGCGTACAGAAAGGTATGGCTGCGCTCTAATTTTCGATACAGAATACCGATGAGCCTGTTGTGTGATACCATGTTCAGCTATAATTCATTTCCGAGGAAATTTTATAGCTGTCTCTTGGCCATTTTCCTCCTGTTTTGGTGCATTGATGATAATCTAAAATACTAAATGTGTCTATTTCTGTTTATTTACTCAAGTAATAGTATGATTGGTTTTCTAGGGGAAAATGAGACGAATGATAGAAGCTGAACCACCTATAGATGAAGCTGCACTTGCTAAGCTGGTTCCTGAGGTAGGCATGGAATTTGAGAGTGAGGACAAGGCCTATGAATTCTACAACAAATATGCTGGACATGTTGGTTTTAGTGTTCGGAAAAGTACATCACACAAATCTTCCGGAAATATTACCAAAGTAAGGACTTTTGTTTGCTCAAGGGAAGGTTACAACAGGGACAAAAAATCATTGGAAGCAAAGAAGCCAAGGCTGGATACAAGAATTGGTTGTCCAGCGCGGTTGATTATTAAAGTCACACCAGAGAGTAAATACAGAGTCACTGACTTCAAAGCGGACCACAATCATCAGCTGGCCCCTCCTTCGACAATGCATATGTTAAGGTCACAGAGGATATTGACAGAACTTCAGTCTGGGGAAGCAGAATTGTCAGATGATTCTGTCATGACACCTACAACAAAAGCAACCGGTGATCTTGTTGTGAGACAAATTGGTTTCCTTCGAAGTATCTCTCTCCTCCCAGCAGATTATAAGAATTATCTCCGTTCAAAGCGTATGAAGGCTATGCAACTCGGTGATGGTGGCGCAATATTGAAATATTTGCAGACAATGCAAATGGAAAATCCTGCTTTCTTTTACACCATGCAGATTGATGAAGACGACAAGCTAACCAACTTCTTTTGGGCTGACCCAAAATCTAGAGAAGACTTCAACTACTTTGGTGATGTCCTCTGTCTAGACACAACTTACAAAATAAATGGATATGGCAGACCATTGTCATTATTCCTCGGAGTGAATCATCACAAACAAACAATTGTTTTTGGTGCAGCTATGCTTTATGATGAATCATTTGAGTCATATAGGTGGCTGTTTGAGAGTTTTAAGATTGCTATGCATGGAAAACAACCAGCGGTAGCTTTAGTAGATCAATCTATTCCACTTGCTAGTGCAATGGCAGCAGCATGGCCAAATACTACTCAAAGAACTTGTGCTTGGCATGTATATCAGAACTCTCTTAAGCACCTTAATCATGTTTTCCAAGGTTCAAAAACATTTGCAAAGGATTTTAGCAGATGTGTATTTGGCTATGAGGAAGAGGAAGAATTCTTGTTTGCCTGGAGAAGCATGCTAGAAAAGTATGATCTTAGGCATAATGAGTGGCTGTCTAAATTGTTTGATGAAAGGGAAAGATGGGCTTTGGCATATGAGAGACATATATTTTGTGCTGACATAATAAGTGCACTTCAAGCTGAAAGCTTCAGTAGTGTTCTGAAAAAGTTCTTGGGCCCTCAACTGGATTTACTGTCCTTCTTCAAGCATTATGAAAGAGCCGTAGATGAGCACCGCTATGCTGAGCTCCAAGCTGACTTCCAAGCTAGTCAAAGTTATCCAAGAATACCCCCAGCCAAGATGTTAAAGCAAGCTGCCCATACATATACCCCAGTGGTGTTTGAGATCTTTCGTAAAGAGTTTGAGCTGTTCATGGACTCTGTTCTGTTCAGTTGTGGGGAAGCTGGGGCAACCTCTGAGTACAAAGTCGCTCCCTCTGAAAAACCCAAGGAACATTTTGTTAGATTTGACTCGAGTGACTGCTCCTGTATCTGCACTTGTAGGAAGTTTGAGTTTATGGGTATTCCATGTTGCCATATGTTGAAGGTGCTCGATTACAGAAATATCAAAGAATTACCTCAGAGATATCTGTTGAAGCGATGGAGAAGGACTGCCAAGTCTGCAAATGAAGAAAACCAAGGGTATGTGGCAAATGGAAATGGTTCATCATTAAATTCCATTGTACCTCCTGCAAACCATCATGGTCTCCAAGGCTTCAGTGCAATGATTCAAGTAACCAATCTGCAAGATTCATTCTCCTTGTTTTCCCCCTGTATGTGCTGTGGCTGATAAAGTTTTCTATCTTGGTTAACTGCAGGACACTCCTGTTTCTAATATGCATGAGAATTCATTTCGCAGAAGCTCATGATGCAGGTATCATACATGATTATGAATTATTAATATGCCAATTTGATCTCTTGTTTTGTTTGGACTATTACTGAGCCTATCTGGTTCTATCCATTGCACCAAAACCTAGGGCATTGATTTACAACCAAAGTTTCCCCCTTCTGAGAGATGCATGACAAATTTTTTAGGGAGATTTAGATAGAATATTTTGTTTGTTGAATATTGCTCACTTGGTTCTGGATTTTCCTCCTTCGAGGTACAATTATTAAAGCAGTTTGGCGATGACACGTGGACAAACTTAGCTCTGTTGGATCAAACAGATTATTTATGTGATCAATTTATCATGCAGGTGACTTGAATCTAAACATTATTCCTTCTGCACGGTGCCTGCTCCACGATACTGGCGTTGAAGCAGTGAGAACAGGCCATGCGGAGCTCCCCCGAATAAAAGTTTCCAACTTGTAAATTATGCAGCTGTAGGAAATCCCAGCTATTGAGGCGCCCATCCTACTTAGGCTCTTAGACTAGATTCTGGTATGAAATCATATGATTGTGCTGCCCACCTGCACCCAGGGAAATTTTGTGCATTCTGTAAACAGTCTATTTATCCTAGCCCATTCATAAAAGAAAAAAAAAGGTGATCAGATGCCAATGCAGAGAGATTGCTCCTTTGAAACTTTGCAGGGCAAGCAGACCCATCATGATCATCAATCCTAGGAGGGTTTCAGTTAGATTCAGATCTTGGGGTGGTTTCATTTCGTTTCATTTCACCTGCAGGTGAGGTGAGCTGGACAGCTCATGCAATAAAACGTTGGAAGCAAGACAAGCCCAGCTTGGCAGTGTGGATCTCAAGCCCGGAGAGCTACCGGCCGAGCTAGGAGCTGCCTTTGACGCTACAGTGGACAGCTGTGCTTTCAAGCCTGGCTTTGGGCGCATTTGTCCCATATGCACAGTTGCATAATGCGTGCAAATGTTGTTCATTGTCCTCAATGCATCGTATATCTTGGGAGCTTCGATAATGCTGCTACCAATGTGTCCTTGAAAAACACATTCGAGGTGCTTTCGTGCTCGCTCTCTTTTTTCCAACTCTGTCAGGTTTCTTTTCAAACAAAGTTATTTCAGACATTTTTCTATAAAATGTCTTTGAAATATATACTTCCATTCAAAGGAAGCCTCAATGCGATCATTTTAACGGTTCTAAGTAAAGTATCATATATTTAGTCT

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CDS seq

ATGCGAGTGTGGCTTGGCAGGGTTGGTGGTGGTGATGCCATGATGCACATGCTGGTGGCCCCCGATGGAGGCGGCGGAGGGGAGATGCCGCCGCCGTACGGGGGAGCCGCGGCGGCGCCGCCGCCGCCGATGGAGCAGGAGCTGGAGCTCCACCGCGACAACGCCGACGACGGCCTCGACGGCCACGTGCGGTGCTTGAGGTGTGGTATATCCGGCAACGCGACGCCCCATATGCGCCGCGGCCCTGATGGCCCAAGAACTCTCTGTAATGCGTGCGGCATTGCGTACAGAAAGGGGAAAATGAGACGAATGATAGAAGCTGAACCACCTATAGATGAAGCTGCACTTGCTAAGCTGGTTCCTGAGGTAGGCATGGAATTTGAGAGTGAGGACAAGGCCTATGAATTCTACAACAAATATGCTGGACATGTTGGTTTTAGTGTTCGGAAAAGTACATCACACAAATCTTCCGGAAATATTACCAAAGTAAGGACTTTTGTTTGCTCAAGGGAAGGTTACAACAGGGACAAAAAATCATTGGAAGCAAAGAAGCCAAGGCTGGATACAAGAATTGGTTGTCCAGCGCGGTTGATTATTAAAGTCACACCAGAGAGTAAATACAGAGTCACTGACTTCAAAGCGGACCACAATCATCAGCTGGCCCCTCCTTCGACAATGCATATGTTAAGGTCACAGAGGATATTGACAGAACTTCAGTCTGGGGAAGCAGAATTGTCAGATGATTCTGTCATGACACCTACAACAAAAGCAACCGGTGATCTTGTTGTGAGACAAATTGGTTTCCTTCGAAGTATCTCTCTCCTCCCAGCAGATTATAAGAATTATCTCCGTTCAAAGCGTATGAAGGCTATGCAACTCGGTGATGGTGGCGCAATATTGAAATATTTGCAGACAATGCAAATGGAAAATCCTGCTTTCTTTTACACCATGCAGATTGATGAAGACGACAAGCTAACCAACTTCTTTTGGGCTGACCCAAAATCTAGAGAAGACTTCAACTACTTTGGTGATGTCCTCTGTCTAGACACAACTTACAAAATAAATGGATATGGCAGACCATTGTCATTATTCCTCGGAGTGAATCATCACAAACAAACAATTGTTTTTGGTGCAGCTATGCTTTATGATGAATCATTTGAGTCATATAGGTGGCTGTTTGAGAGTTTTAAGATTGCTATGCATGGAAAACAACCAGCGGTAGCTTTAGTAGATCAATCTATTCCACTTGCTAGTGCAATGGCAGCAGCATGGCCAAATACTACTCAAAGAACTTGTGCTTGGCATGTATATCAGAACTCTCTTAAGCACCTTAATCATGTTTTCCAAGGTTCAAAAACATTTGCAAAGGATTTTAGCAGATGTGTATTTGGCTATGAGGAAGAGGAAGAATTCTTGTTTGCCTGGAGAAGCATGCTAGAAAAGTATGATCTTAGGCATAATGAGTGGCTGTCTAAATTGTTTGATGAAAGGGAAAGATGGGCTTTGGCATATGAGAGACATATATTTTGTGCTGACATAATAAGTGCACTTCAAGCTGAAAGCTTCAGTAGTGTTCTGAAAAAGTTCTTGGGCCCTCAACTGGATTTACTGTCCTTCTTCAAGCATTATGAAAGAGCCGTAGATGAGCACCGCTATGCTGAGCTCCAAGCTGACTTCCAAGCTAGTCAAAGTTATCCAAGAATACCCCCAGCCAAGATGTTAAAGCAAGCTGCCCATACATATACCCCAGTGGTGTTTGAGATCTTTCGTAAAGAGTTTGAGCTGTTCATGGACTCTGTTCTGTTCAGTTGTGGGGAAGCTGGGGCAACCTCTGAGTACAAAGTCGCTCCCTCTGAAAAACCCAAGGAACATTTTGTTAGATTTGACTCGAGTGACTGCTCCTGTATCTGCACTTGTAGGAAGTTTGAGTTTATGGGTATTCCATGTTGCCATATGTTGAAGGTGCTCGATTACAGAAATATCAAAGAATTACCTCAGAGATATCTGTTGAAGCGATGGAGAAGGACTGCCAAGTCTGCAAATGAAGAAAACCAAGGGACACTCCTGTTTCTAATATGCATGAGAATTCATTTCGCAGAAGCTCATGATGCAGGTGACTTGAATCTAAACATTATTCCTTCTGCACGGTGCCTGCTCCACGATACTGGCGTTGAAGCAGTGAGAACAGGCCATGCGGAGCTCCCCCGAATAAAAGTTTCCAACTTGTAA

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Protein seq

MRVWLGRVGGGDAMMHMLVAPDGGGGGEMPPPYGGAAAAPPPPMEQELELHRDNADDGLDGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKMRRMIEAEPPIDEAALAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVCSREGYNRDKKSLEAKKPRLDTRIGCPARLIIKVTPESKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQSGEAELSDDSVMTPTTKATGDLVVRQIGFLRSISLLPADYKNYLRSKRMKAMQLGDGGAILKYLQTMQMENPAFFYTMQIDEDDKLTNFFWADPKSREDFNYFGDVLCLDTTYKINGYGRPLSLFLGVNHHKQTIVFGAAMLYDESFESYRWLFESFKIAMHGKQPAVALVDQSIPLASAMAAAWPNTTQRTCAWHVYQNSLKHLNHVFQGSKTFAKDFSRCVFGYEEEEEFLFAWRSMLEKYDLRHNEWLSKLFDERERWALAYERHIFCADIISALQAESFSSVLKKFLGPQLDLLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQAAHTYTPVVFEIFRKEFELFMDSVLFSCGEAGATSEYKVAPSEKPKEHFVRFDSSDCSCICTCRKFEFMGIPCCHMLKVLDYRNIKELPQRYLLKRWRRTAKSANEENQGTLLFLICMRIHFAEAHDAGDLNLNIIPSARCLLHDTGVEAVRTGHAELPRIKVSNL

Function Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os07g42400 LOC_Os07g42400.1 Chr07 25371994 25376165 + MSU_osa1r7
CDS seq

ATGCGAGTGTGGCTTGGCAGGGTTGGTGGTGGTGATGCCATGATGCACATGCTGGTGGCCCCCGATGGAGGCGGCGGAGGGGAGATGCCGCCGCCGTACGGGGGAGCCGCGGCGGCGCCGCCGCCGCCGATGGAGCAGGAGCTGGAGCTCCACCGCGACAACGCCGACGACGGCCTCGACGGCCACGTGCGGTGCTTGAGGTGTGGTATATCCGGCAACGCGACGCCCCATATGCGCCGCGGCCCTGATGGCCCAAGAACTCTCTGTAATGCGTGCGGCATTGCGTACAGAAAGGGGAAAATGAGACGAATGATAGAAGCTGAACCACCTATAGATGAAGCTGCACTTGCTAAGCTGGTTCCTGAGGTAGGCATGGAATTTGAGAGTGAGGACAAGGCCTATGAATTCTACAACAAATATGCTGGACATGTTGGTTTTAGTGTTCGGAAAAGTACATCACACAAATCTTCCGGAAATATTACCAAAGTAAGGACTTTTGTTTGCTCAAGGGAAGGTTACAACAGGGACAAAAAATCATTGGAAGCAAAGAAGCCAAGGCTGGATACAAGAATTGGTTGTCCAGCGCGGTTGATTATTAAAGTCACACCAGAGAGTAAATACAGAGTCACTGACTTCAAAGCGGACCACAATCATCAGCTGGCCCCTCCTTCGACAATGCATATGTTAAGGTCACAGAGGATATTGACAGAACTTCAGTCTGGGGAAGCAGAATTGTCAGATGATTCTGTCATGACACCTACAACAAAAGCAACCGGTGATCTTGTTGTGAGACAAATTGGTTTCCTTCGAAGTATCTCTCTCCTCCCAGCAGATTATAAGAATTATCTCCGTTCAAAGCGTATGAAGGCTATGCAACTCGGTGATGGTGGCGCAATATTGAAATATTTGCAGACAATGCAAATGGAAAATCCTGCTTTCTTTTACACCATGCAGATTGATGAAGACGACAAGCTAACCAACTTCTTTTGGGCTGACCCAAAATCTAGAGAAGACTTCAACTACTTTGGTGATGTCCTCTGTCTAGACACAACTTACAAAATAAATGGATATGGCAGACCATTGTCATTATTCCTCGGAGTGAATCATCACAAACAAACAATTGTTTTTGGTGCAGCTATGCTTTATGATGAATCATTTGAGTCATATAGGTGGCTGTTTGAGAGTTTTAAGATTGCTATGCATGGAAAACAACCAGCGGTAGCTTTAGTAGATCAATCTATTCCACTTGCTAGTGCAATGGCAGCAGCATGGCCAAATACTACTCAAAGAACTTGTGCTTGGCATGTATATCAGAACTCTCTTAAGCACCTTAATCATGTTTTCCAAGGTTCAAAAACATTTGCAAAGGATTTTAGCAGATGTGTATTTGGCTATGAGGAAGAGGAAGAATTCTTGTTTGCCTGGAGAAGCATGCTAGAAAAGTATGATCTTAGGCATAATGAGTGGCTGTCTAAATTGTTTGATGAAAGGGAAAGATGGGCTTTGGCATATGAGAGACATATATTTTGTGCTGACATAATAAGTGCACTTCAAGCTGAAAGCTTCAGTAGTGTTCTGAAAAAGTTCTTGGGCCCTCAACTGGATTTACTGTCCTTCTTCAAGCATTATGAAAGAGCCGTAGATGAGCACCGCTATGCTGAGCTCCAAGCTGACTTCCAAGCTAGTCAAAGTTATCCAAGAATACCCCCAGCCAAGATGTTAAAGCAAGCTGCCCATACATATACCCCAGTGGTGTTTGAGATCTTTCGTAAAGAGTTTGAGCTGTTCATGGACTCTGTTCTGTTCAGTTGTGGGGAAGCTGGGGCAACCTCTGAGTACAAAGTCGCTCCCTCTGAAAAACCCAAGGAACATTTTGTTAGATTTGACTCGAGTGACTGCTCCTGTATCTGCACTTGTAGGAAGTTTGAGTTTATGGGTATTCCATGTTGCCATATGTTGAAGGTGCTCGATTACAGAAATATCAAAGAATTACCTCAGAGATATCTGTTGAAGCGATGGAGAAGGACTGCCAAGTCTGCAAATGAAGAAAACCAAGGGACACTCCTGTTTCTAATATGCATGAGAATTCATTTCGCAGAAGCTCATGATGCAGGTGACTTGAATCTAAACATTATTCCTTCTGCACGGTGCCTGCTCCACGATACTGGCGTTGAAGCAGTGAGAACAGGCCATGCGGAGCTCCCCCGAATAAAAGTTTCCAACTTGTAA

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Protein seq

MRVWLGRVGGGDAMMHMLVAPDGGGGGEMPPPYGGAAAAPPPPMEQELELHRDNADDGLDGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKMRRMIEAEPPIDEAALAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVCSREGYNRDKKSLEAKKPRLDTRIGCPARLIIKVTPESKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQSGEAELSDDSVMTPTTKATGDLVVRQIGFLRSISLLPADYKNYLRSKRMKAMQLGDGGAILKYLQTMQMENPAFFYTMQIDEDDKLTNFFWADPKSREDFNYFGDVLCLDTTYKINGYGRPLSLFLGVNHHKQTIVFGAAMLYDESFESYRWLFESFKIAMHGKQPAVALVDQSIPLASAMAAAWPNTTQRTCAWHVYQNSLKHLNHVFQGSKTFAKDFSRCVFGYEEEEEFLFAWRSMLEKYDLRHNEWLSKLFDERERWALAYERHIFCADIISALQAESFSSVLKKFLGPQLDLLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQAAHTYTPVVFEIFRKEFELFMDSVLFSCGEAGATSEYKVAPSEKPKEHFVRFDSSDCSCICTCRKFEFMGIPCCHMLKVLDYRNIKELPQRYLLKRWRRTAKSANEENQGTLLFLICMRIHFAEAHDAGDLNLNIIPSARCLLHDTGVEAVRTGHAELPRIKVSNL

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Gene Transcript Chromosome Start End Strand Source
LOC_Os07g42400 LOC_Os07g42400.2 Chr07 25371994 25376165 + MSU_osa1r7
CDS seq

ATGCGAGTGTGGCTTGGCAGGGTTGGTGGTGGTGATGCCATGATGCACATGCTGGTGGCCCCCGATGGAGGCGGCGGAGGGGAGATGCCGCCGCCGTACGGGGGAGCCGCGGCGGCGCCGCCGCCGCCGATGGAGCAGGAGCTGGAGCTCCACCGCGACAACGCCGACGACGGCCTCGACGGCCACGTGCGGTGCTTGAGGTGTGGTATATCCGGCAACGCGACGCCCCATATGCGCCGCGGCCCTGATGGCCCAAGAACTCTCTGTAATGCGTGCGGCATTGCGTACAGAAAGGGGAAAATGAGACGAATGATAGAAGCTGAACCACCTATAGATGAAGCTGCACTTGCTAAGCTGGTTCCTGAGGTAGGCATGGAATTTGAGAGTGAGGACAAGGCCTATGAATTCTACAACAAATATGCTGGACATGTTGGTTTTAGTGTTCGGAAAAGTACATCACACAAATCTTCCGGAAATATTACCAAAGTAAGGACTTTTGTTTGCTCAAGGGAAGGTTACAACAGGGACAAAAAATCATTGGAAGCAAAGAAGCCAAGGCTGGATACAAGAATTGGTTGTCCAGCGCGGTTGATTATTAAAGTCACACCAGAGAGTAAATACAGAGTCACTGACTTCAAAGCGGACCACAATCATCAGCTGGCCCCTCCTTCGACAATGCATATGTTAAGGTCACAGAGGATATTGACAGAACTTCAGTCTGGGGAAGCAGAATTGTCAGATGATTCTGTCATGACACCTACAACAAAAGCAACCGGTGATCTTGTTGTGAGACAAATTGGTTTCCTTCGAAGTATCTCTCTCCTCCCAGCAGATTATAAGAATTATCTCCGTTCAAAGCGTATGAAGGCTATGCAACTCGGTGATGGTGGCGCAATATTGAAATATTTGCAGACAATGCAAATGGAAAATCCTGCTTTCTTTTACACCATGCAGATTGATGAAGACGACAAGCTAACCAACTTCTTTTGGGCTGACCCAAAATCTAGAGAAGACTTCAACTACTTTGGTGATGTCCTCTGTCTAGACACAACTTACAAAATAAATGGATATGGCAGACCATTGTCATTATTCCTCGGAGTGAATCATCACAAACAAACAATTGTTTTTGGTGCAGCTATGCTTTATGATGAATCATTTGAGTCATATAGGTGGCTGTTTGAGAGTTTTAAGATTGCTATGCATGGAAAACAACCAGCGGTAGCTTTAGTAGATCAATCTATTCCACTTGCTAGTGCAATGGCAGCAGCATGGCCAAATACTACTCAAAGAACTTGTGCTTGGCATGTATATCAGAACTCTCTTAAGCACCTTAATCATGTTTTCCAAGGTTCAAAAACATTTGCAAAGGATTTTAGCAGATGTGTATTTGGCTATGAGGAAGAGGAAGAATTCTTGTTTGCCTGGAGAAGCATGCTAGAAAAGTATGATCTTAGGCATAATGAGTGGCTGTCTAAATTGTTTGATGAAAGGGAAAGATGGGCTTTGGCATATGAGAGACATATATTTTGTGCTGACATAATAAGTGCACTTCAAGCTGAAAGCTTCAGTAGTGTTCTGAAAAAGTTCTTGGGCCCTCAACTGGATTTACTGTCCTTCTTCAAGCATTATGAAAGAGCCGTAGATGAGCACCGCTATGCTGAGCTCCAAGCTGACTTCCAAGCTAGTCAAAGTTATCCAAGAATACCCCCAGCCAAGATGTTAAAGCAAGCTGCCCATACATATACCCCAGTGGTGTTTGAGATCTTTCGTAAAGAGTTTGAGCTGTTCATGGACTCTGTTCTGTTCAGTTGTGGGGAAGCTGGGGCAACCTCTGAGTACAAAGTCGCTCCCTCTGAAAAACCCAAGGAACATTTTGTTAGATTTGACTCGAGTGACTGCTCCTGTATCTGCACTTGTAGGAAGTTTGAGTTTATGGGTATTCCATGTTGCCATATGTTGAAGGTGCTCGATTACAGAAATATCAAAGAATTACCTCAGAGATATCTGTTGAAGCGATGGAGAAGGACTGCCAAGTCTGCAAATGAAGAAAACCAAGGGTATGTGGCAAATGGAAATGGTTCATCATTAAATTCCATTGTACCTCCTGCAAACCATCATGGTCTCCAAGGCTTCAGTGCAATGATTCAAGACACTCCTGTTTCTAATATGCATGAGAATTCATTTCGCAGAAGCTCATGA

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Protein seq

MRVWLGRVGGGDAMMHMLVAPDGGGGGEMPPPYGGAAAAPPPPMEQELELHRDNADDGLDGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKMRRMIEAEPPIDEAALAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVCSREGYNRDKKSLEAKKPRLDTRIGCPARLIIKVTPESKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQSGEAELSDDSVMTPTTKATGDLVVRQIGFLRSISLLPADYKNYLRSKRMKAMQLGDGGAILKYLQTMQMENPAFFYTMQIDEDDKLTNFFWADPKSREDFNYFGDVLCLDTTYKINGYGRPLSLFLGVNHHKQTIVFGAAMLYDESFESYRWLFESFKIAMHGKQPAVALVDQSIPLASAMAAAWPNTTQRTCAWHVYQNSLKHLNHVFQGSKTFAKDFSRCVFGYEEEEEFLFAWRSMLEKYDLRHNEWLSKLFDERERWALAYERHIFCADIISALQAESFSSVLKKFLGPQLDLLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQAAHTYTPVVFEIFRKEFELFMDSVLFSCGEAGATSEYKVAPSEKPKEHFVRFDSSDCSCICTCRKFEFMGIPCCHMLKVLDYRNIKELPQRYLLKRWRRTAKSANEENQGYVANGNGSSLNSIVPPANHHGLQGFSAMIQDTPVSNMHENSFRRSS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 1.013731 0.607844 0.801948

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0615900 RBH 1.649248 1.127824 3.235230
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g08370 RBH 0.609474 0.598096 0.469367
Nipponbare | IRGSP 1.0 | RAP-db Os07g0615900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0023270 RBH 0.687363 11.218546 3.448845
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0023330 RBH 0.383178 0.632424 2.991814
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0023960 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0023890 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0023200 RBH 6.878921 4.672679 13.048926
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0415800 RBH 5.351067 11.8367555 13.720597
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0023690 RBH 0.382531 0.882464 1.451395
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0426100 RBH 5.740925 14.107781 14.686185
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0015200 SBH 0.038502 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0015380 SBH 0.604177 2.997050 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0023020 RBH 5.144393 17.033373 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0023230 RBH 0.553296 0.336587 0.421778
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0015420 SBH 0.147920 0.712940 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G022950 RBH 0.663954 5.745052 4.569552
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0023750 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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