Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g14030 | OGI:05021250 | 1/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:7837222-7837596 | ||||||||
| Gene Symbol | RLCK182, OsRLCK182 | ||||||||||
| DNA seq | ATGGTGGGAGGACCGCTGGACTGGGCGGCGTGGATGCGCATCGCCTCCGCCGCCGCGCATGGCCTAGCATACATCCACCACGCGAGTCGCCGAGGCAGCGGGACGCCAAGGCTGGTGCACGGCAACATCAAGAGCACGAACATACTGCTCGACAAAGCTGGCGTGGCACGGCTCGCGGACTCCGGCCTGGCGCTGCTAGGCTCGTCCCCGGCGGCCGCCGCGGTGCGCTCAGCGGGGTACCGTGGCCCCGAGGCGCCCCCGCCCGCCGCCGCTCCAACCCATGCTCCCCGTGCCTGGCCGAAGGGGAGAGAAGAGAAAGAGAAAGAAAGAGAGAAGGGAGAAAGAGGGGAGGAAGAAGAAAGAGAGAGAGGATGA |
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| CDS seq | ATGGTGGGAGGACCGCTGGACTGGGCGGCGTGGATGCGCATCGCCTCCGCCGCCGCGCATGGCCTAGCATACATCCACCACGCGAGTCGCCGAGGCAGCGGGACGCCAAGGCTGGTGCACGGCAACATCAAGAGCACGAACATACTGCTCGACAAAGCTGGCGTGGCACGGCTCGCGGACTCCGGCCTGGCGCTGCTAGGCTCGTCCCCGGCGGCCGCCGCGGTGCGCTCAGCGGGGTACCGTGGCCCCGAGGCGCCCCCGCCCGCCGCCGCTCCAACCCATGCTCCCCGTGCCTGGCCGAAGGGGAGAGAAGAGAAAGAGAAAGAAAGAGAGAAGGGAGAAAGAGGGGAGGAAGAAGAAAGAGAGAGAGGATGA |
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| Protein seq | MVGGPLDWAAWMRIASAAAHGLAYIHHASRRGSGTPRLVHGNIKSTNILLDKAGVARLADSGLALLGSSPAAAAVRSAGYRGPEAPPPAAAPTHAPRAWPKGREEKEKEREKGERGEEEERERG |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At1g68400 [UniProtKB/Swiss-Prot:Q9M9C5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g14030 | LOC_Os05g14030.1 | Chr05 | 7837222 | 7837596 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTGGGAGGACCGCTGGACTGGGCGGCGTGGATGCGCATCGCCTCCGCCGCCGCGCATGGCCTAGCATACATCCACCACGCGAGTCGCCGAGGCAGCGGGACGCCAAGGCTGGTGCACGGCAACATCAAGAGCACGAACATACTGCTCGACAAAGCTGGCGTGGCACGGCTCGCGGACTCCGGCCTGGCGCTGCTAGGCTCGTCCCCGGCGGCCGCCGCGGTGCGCTCAGCGGGGTACCGTGGCCCCGAGGCGCCCCCGCCCGCCGCCGCTCCAACCCATGCTCCCCGTGCCTGGCCGAAGGGGAGAGAAGAGAAAGAGAAAGAAAGAGAGAAGGGAGAAAGAGGGGAGGAAGAAGAAAGAGAGAGAGGATGA
More
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| Protein seq | MVGGPLDWAAWMRIASAAAHGLAYIHHASRRGSGTPRLVHGNIKSTNILLDKAGVARLADSGLALLGSSPAAAAVRSAGYRGPEAPPPAAAPTHAPRAWPKGREEKEKEREKGERGEEEERERG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0207700 | SBH | 0.0 | 0.127680 | 0.502392 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g17285 | RBH | 1.002789 | 1.015613 | 0.750610 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0207700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0007080 | SBH | 0.0 | 1.351950 | 0.490114 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0007130 | SBH | 0.0 | 2.762444 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0007020 | SBH | 0.000000 | 0.000000 | 1.885929 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0007070 | SBH | 0.0 | 0.118307 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0007170 | SBH | 0.0 | 6.693599 | 2.198930 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0100100 | SBH | 2.0078955 | 4.8404125 | 18.1265825 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0007020 | SBH | 0.0 | 0.082509 | 0.202367 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0099100 | SBH | 2.2249285 | 4.636801 | 37.394491 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0007070 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0007000 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0007080 | SBH | 0.0 | 4.545192 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0007170 | SBH | 0.0 | 0.240242 | 0.180768 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0007120 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G006890 | SBH | 0.0 | 0.680112 | 1.174941 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0007140 | SBH | 0.0 | 2.024158 | 1.330381 |
