Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_05g0007020 OGI:05018110 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr05:6641257-6646733
Gene Symbol RLCK182, OsRLCK182
DNA seq

tttgggcaatcataattcatacggagtaatagttaacaactaaccgatcaaccgtccattgcagtttctgatgcttgtacgataaattacaaaaggccaaaaatatgatgcactatcaacaaatcttccttgggtcatcaacgacattaatcatgtggccctcccctctcaatatataaaagagagaacataaacaatgtctcaaattgcaacccgtcacaatagtttgctgttggaaacttgacatgcacctgaacattattaccacattgttatttttttttgggaacttttagtcacattctacagaaataataaatttgccgcttctctgaagtatgtgctggaagcttaaagaaaacgagaaaggaaatgcatgaaaatgctcaactggcaaatgtttgtttttataagttccagaatcctactatatacatatacaaaaagatacatcggcgatgtttataggccaagctgatgagaccaacgtattagcacaagagttaagacaacgaacatggatctccaaagacacctaacataattgacaagccaaaagaaaattcagcagtacattgcaattctgccagctggaaacaacactctctgatcattcccacagggcacaaccataagtactaagccaaaccacctaacatgatcactaattgcacatgactagaggacttcccttcaaactgaaactagctttctggtccatcgaactaaattaatgcttgatttctaaatctaactgcttacgattcacctcgcaaaatcaggaattcactggcagaggaagagaattaagttatggagcatactgatctcataaactcagcagtagttgttagatgtagatgaaaatttccagaaaagtcaagcaccaacctggaaactgagcattcaacttccccttcaagtggcttctacgcttggacactagggttgcacgtctttggagtagaacgattcttgacaagcggaaccaacgattgaaccacatcagccattagtggcctgtagtcagcctcttgttgaacacacatggcagcaatggcagccacttggacagcatctttcaatgaatattgaccctccagtgcaggatccaagatctgcacaaccttctctcggtctgtgagcataggcaatgcctgcatcaatgcaactagccacaggtcagatatatgcaatgtttaaatattatttttgaagataaataattacatggaacctttcctacctagtataacaagagaggcagatggatcctaattaagctgtaacgtgattcactagcataagaaaatgacaggaataatgaagcagagtcgattgaagtgcatggtaaattttagtgttgaagtacatgtactgatgtaccttagtacatattggttcctcacttggaaagcatctcaaacttttgcaactgaagtactaagtgttccattacctcatttatactatgaactaaacagtagtactaattttataattcctgatggttgaagaaaaacagttcaaagtaaagatacatcggtacaactatgtgatggtcagctaatgttcttacccagttaactagaacaccttcgcctggaggcctcttcatatcaactggcaccctgccagtaagcaactccagaagtacaacaccgtaactatagacatcggatttggtcgtcaaatgcccggtcaaagcatatcttcagagtttgtgtagcatgcaccacattagagacagtataatcagttcaacaattcatttatattatcaaatcaaacagtaaaatggaaaaagaattgaatgtatcagtatcaaactcaagttcgttcacaatgggttcagaatttggtcttactctggtgcaacataaccttgtgtgcctagaactcgagttgatacatgaccaccagctctatcagatccaagcttagccaaaccaaaatctgacactcttgcacggaagtccttgtccagtagaatgttgctgctcttgaagtctctgtgtataacaggtggattaacacgctcgtgaagatattccagaccttttgctgcttcaagagctattctcattctagtaggccagtccaattttgagataccaccacaggaacctacaatgtcagctttgtgggatatcagttgacgagaaaaatgggcgcgcctacaaatcgggtgcccgatatttttgtcaaaaatcgggcgttgtttcaccaagtagatcgaaaatgtttcaatcttttcaaaagctgaaacacaaccaaatcacctcatgaaacattttgctacaacgtatgaaacaaacagtttccagaaaatcaggcgttgtttcaccctatataaaaacaatgtttcagcaaatatgaaagaatgtttcaattcttaaaaaaaagtgaaacacgatcagatcgctagatgaaacaatttggttcaacgtatgcaacaaacgatttaaagccattgcaacacttaaaactcgtgtacatcaacaaaccacgtgtccatcaagttgaaaatattaaacagtatcaaaaattcactgcaacatgtgatccatacataggaaaacatcacgagtatactagctgaaacattgttggtggaacaaaaaatgaaacggatcccccttaatagggtgtttccattatatccgggcggctgttgcaatgggcgcgcgtggtgggggcgcatggtgagggcgcgcgaggcgtgggcggcgcggggcgcctgattttttttctccccatcgggcgcccgacggggaggatttccgaagaaaatttggctgaatgaataccatcactaaaaaagatatgctacggtaaatgacaaggaaacattttcagaaacttcatattttcatatcaaccaaaagaattgaaatgtggtaatctgtaatttcacagtatgccaactacctgcccactttaaggacttaaagcagtatcaatgtataccaataaagaaagaacacaatgcatatgtaatgactgcaattttgtagtgaattcacttcacttgttttccaaaccataacttttagaactatctcggcaggccatatatacaagactcaacagattaataactcaattgtaaggatgaaaaataatggtggtgctctctcaacaaaggccagatgaccgattttacaatattacaaggcttgatttttttttgtggaaaaaacaccagatttttaagattgaagacaccttgttcaccataggactagctaagagttcttatctggaagagagaaggcctaaaacggtcagtttccactttcttgtacagtattaaacagactaaaatcagtaaattcacactgataagaggttagcatgctttccttagcaattaaaccaagcaaatagtgtagacagtatatttaaatactatagatctaggccactaaattgctaaagctttacatgaatacataaaccatttcttgatgaactggaaattctgtttgattcttttgacattgtgactttgagataggtgatttgataggttcaccaattaggtaagttctcttctctaactgtcattccgaagggatagtcaatcttcaagagcatatgtaaacatcaaacaacgtatcctatatcagcattacagagaatgtaattattttcattgctatatcatgtatccagaccaagcagtcccaatggactcatagaatggcagaggcaaatagagctcttgcacattttcgttaatccatgaacagaatctagggaaaaattcataatgaattagcatacgaccaatggtgtctagtaataaaaaccaaggtacagtacatgaaatattcaactcccaattcgtttgtcttctgatatgtaatactaagcatcaaatttagaatttttattcctgtattatttgaatctcactttccctccttttagtcagatataagtttgtttcctcagcaagacaactgttacaactgctccatttcttcccctcaaagtatcaggacataataaggttatcaaccaaatacttcatgtgcgctaaaagcaattaattcagctaggtccctagttctagctgtggcatcactagtgttttgcagttttgccatccaaagacaatagtcaactaagttcagggatagcttcccagtcaatttgctctcatagtttggtgttcaaatgttgcaacacttaactaacaacatcaaacctgcctaaaaatcattgtaaaatatcaaattcaactatagttgtaattggatgctaaaaggtgtgcatacctccatttgggtagagatgctcctggagacccccattggccatgaattcatagaccagcagccggtgtccaccctctgaacaatggccaatcaagcccaaaagataaggtgatcgaagccgactcagcagctccacctgccaaaagatcaccaatgccccatattaaccgctcaaacttgattagaacagcttagaattccagcagtagcaacatcataacccagatttacggtaattagagctccatgtgtgtgtttagagccaactacaggccaaaccaagcaaccgaacactccatttttggaaacatctttgacaagatgccaaaccaaaactaaccccaatagacgacagtgaccccatttcgctcggaaactccgcagtgtctcattgtctccattggaccgcaaaatttcatcaacatatataactcgcaatgggtggtaaattcgaatttaccgcccgttgcatgttattctgtcccaggccccaatctcagacggaaacccgcatttcaattgctggtaattactcgaaacgcagattattttttttacctccatctcgaactcctcttccccctgcttgccggggcgatccatgagcttgaccgcgaccttcctcccatcggggagcaccccgcggtagacggccccgaagctcccctgccccaccacgtgcgcccgcccgaacccgcccgtggcggcgtgcagctggcggtagctgaacacctggacggcccccctctccccgccgaccacgaccgccgccgccgcgccgtcgctggcggagttgctagacgggctctccttcccgagcgtcggggcattcgcggaaggaggagggggaggcagcggcgggggcatgggaggaggcgaggaggaggaggagcggcggtggtgcttggggaggtcgagcgagtggaggcggcgggagaccttgcgggtgatgtagcagtagtaggcgaaggcggcgacgagggagaggagggagagcgccgcgagggagacgatgaccatgagtgccaccgactcctcccgcttgtagtcgtcgccgccgccgccgccgctcgacattggaaccctaggtctcggaggtggaggaggaggaatggaggagggaatagcgatcgcgagaagacgacgagggttttgaggggtttgggggcggaggtgggggcggaagcggaa

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CDS seq

atgtcgagcggcggcggcggcggcgacgactacaagcgggaggagtcggtggcactcatggtcatcgtctccctcgcggcgctctccctcctctccctcgtcgccgccttcgcctactactgctacatcacccgcaaggtctcccgccgcctccactcgctcgacctccccaagcaccaccgccgctcctcctcctcctcgcctcctcccatgcccccgccgctgcctccccctcctccttccgcgaatgccccgacgctcgggaaggagagcccgtctagcaactccgccagcgacggcgcggcggcggcggtcgtggtcggcggggagaggggggccgtccaggtgttcagctaccgccagctgcacgccgccacgggcgggttcgggcgggcgcacgtggtggggcaggggagcttcggggccgtctaccgcggggtgctccccgatgggaggaaggtcgcggtcaagctcatggatcgccccggcaagcagggggaagaggagttcgagatggaggtggagctgctgagtcggcttcgatcaccttatcttttgggcttgattggccattgttcagagggtggacaccggctgctggtctatgaattcatggccaatgggggtctccaggagcatctctacccaaatggaggttcctgtggtggtatctcaaaattggactggcctactagaatgagaatagctcttgaagcagcaaaaggtctggaatatcttcacgagcgtgttaatccacctgttatacacagagacttcaagagcagcaacattctactggacaaggacttccgtgcaagagtgtcagattttggtttggctaagcttggatctgatagagctggtggtcatgtatcaactcgagttctaggcacacaaggttatgttgcaccagaatatgctttgaccgggcatttgacgaccaaatccgatgtctatagttacggtgttgtacttctggagttgcttactggcagggtgccagttgatatgaagaggcctccaggcgaaggtgttctagttaactgggcattgcctatgctcacagaccgagagaaggttgtgcagatcttggatcctgcactggagggtcaatattcattgaaagatgctgtccaagtggctgccattgctgccatgtgtgttcaacaagaggctgactacaggccactaatggctgatgtggttcaatcgttggttccgcttgtcaagaatcgttctactccaaagacgtgcaaccctagtgtccaagcgtag

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Protein seq

MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA

Function Receptor-like serine/threonine-protein kinase ALE2 [UniProtKB/Swiss-Prot:Q8RWW0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_05g0007020 OsCMeo_05g0007020.02 Chr05 6641257 6646711 - NAM
CDS seq

atgtcgagcggcggcggcggcggcgacgactacaagcgggaggagtcggtggcactcatggtcatcgtctccctcgcggcgctctccctcctctccctcgtcgccgccttcgcctactactgctacatcacccgcaaggtctcccgccgcctccactcgctcgacctccccaagcaccaccgccgctcctcctcctcctcgcctcctcccatgcccccgccgctgcctccccctcctccttccgcgaatgccccgacgctcgggaaggagagcccgtctagcaactccgccagcgacggcgcggcggcggcggtcgtggtcggcggggagaggggggccgtccaggtgttcagctaccgccagctgcacgccgccacgggcgggttcgggcgggcgcacgtggtggggcaggggagcttcggggccgtctaccgcggggtgctccccgatgggaggaaggtcgcggtcaagctcatggatcgccccggcaagcagggggaagaggagttcgagatggaggtggagctgctgagtcggcttcgatcaccttatcttttgggcttgattggccattgttcagagggtggacaccggctgctggtctatgaattcatggccaatgggggtctccaggagcatctctacccaaatggaggttcctgtggtggtatctcaaaattggactggcctactagaatgagaatagctcttgaagcagcaaaaggtctggaatatcttcacgagcgtgttaatccacctgttatacacagagacttcaagagcagcaacattctactggacaaggacttccgtgcaagagtgtcagattttggtttggctaagcttggatctgatagagctggtggtcatgtatcaactcgagttctaggcacacaaggttatgttgcaccagaatatgctttgaccgggcatttgacgaccaaatccgatgtctatagttacggtgttgtacttctggagttgcttactggcagggtgccagttgatatgaagaggcctccaggcgaaggtgttctagttaactgggcattgcctatgctcacagaccgagagaaggttgtgcagatcttggatcctgcactggagggtcaatattcattgaaagatgctgtccaagtggctgccattgctgccatgtgtgttcaacaagaggctgactacaggccactaatggctgatgtggttcaatcgttggttccgcttgtcaagaatcgttctactccaaagacgtgcaaccctagtgtccaagcgtag

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Protein seq

MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_05g0007020 OsCMeo_05g0007020.03 Chr05 6641630 6646711 - NAM
CDS seq

atgtcgagcggcggcggcggcggcgacgactacaagcgggaggagtcggtggcactcatggtcatcgtctccctcgcggcgctctccctcctctccctcgtcgccgccttcgcctactactgctacatcacccgcaaggtctcccgccgcctccactcgctcgacctccccaagcaccaccgccgctcctcctcctcctcgcctcctcccatgcccccgccgctgcctccccctcctccttccgcgaatgccccgacgctcgggaaggagagcccgtctagcaactccgccagcgacggcgcggcggcggcggtcgtggtcggcggggagaggggggccgtccaggtgttcagctaccgccagctgcacgccgccacgggcgggttcgggcgggcgcacgtggtggggcaggggagcttcggggccgtctaccgcggggtgctccccgatgggaggaaggtcgcggtcaagctcatggatcgccccggcaagcagggggaagaggagttcgagatggaggtggagctgctgagtcggcttcgatcaccttatcttttgggcttgattggccattgttcagagggtggacaccggctgctggtctatgaattcatggccaatgggggtctccaggagcatctctacccaaatggaggttcctgtggtggtatctcaaaattggactggcctactagaatgagaatagctcttgaagcagcaaaaggtctggaatatcttcacgagcgtgttaatccacctgttatacacagagacttcaagagcagcaacattctactggacaaggacttccgtgcaagagtgtcagattttggtttggctaagcttggatctgatagagctggtggtcatgtatcaactcgagttctaggcacacaaggttatgttgcaccagaatatgctttgaccgggcatttgacgaccaaatccgatgtctatagttacggtgttgtacttctggagttgcttactggcagggtgccagttgatatgaagaggcctccaggcgaaggtgttctagttaactgggcattgcctatgctcacagaccgagagaaggttgtgcagatcttggatcctgcactggagggtcaatattcattgaaagatgctgtccaagtggctgccattgctgccatgtgtgttcaacaagaggctgactacaggccactaatggctgatgtggttcaatcgttggttccgcttgtcaagaatcgttctactccaaagacgtgcaaccctagtgtccaagcgtag

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Protein seq

MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_05g0007020 OsCMeo_05g0007020.01 Chr05 6641631 6646733 - NAM
CDS seq

atgtcgagcggcggcggcggcggcgacgactacaagcgggaggagtcggtggcactcatggtcatcgtctccctcgcggcgctctccctcctctccctcgtcgccgccttcgcctactactgctacatcacccgcaaggtctcccgccgcctccactcgctcgacctccccaagcaccaccgccgctcctcctcctcctcgcctcctcccatgcccccgccgctgcctccccctcctccttccgcgaatgccccgacgctcgggaaggagagcccgtctagcaactccgccagcgacggcgcggcggcggcggtcgtggtcggcggggagaggggggccgtccaggtgttcagctaccgccagctgcacgccgccacgggcgggttcgggcgggcgcacgtggtggggcaggggagcttcggggccgtctaccgcggggtgctccccgatgggaggaaggtcgcggtcaagctcatggatcgccccggcaagcagggggaagaggagttcgagatggaggtggagctgctgagtcggcttcgatcaccttatcttttgggcttgattggccattgttcagagggtggacaccggctgctggtctatgaattcatggccaatgggggtctccaggagcatctctacccaaatggaggttcctgtggtggtatctcaaaattggactggcctactagaatgagaatagctcttgaagcagcaaaaggtctggaatatcttcacgagcgtgttaatccacctgttatacacagagacttcaagagcagcaacattctactggacaaggacttccgtgcaagagtgtcagattttggtttggctaagcttggatctgatagagctggtggtcatgtatcaactcgagttctaggcacacaaggttatgttgcaccagaatatgctttgaccgggcatttgacgaccaaatccgatgtctatagttacggtgttgtacttctggagttgcttactggcagggtgccagttgatatgaagaggcctccaggcgaaggtgttctagttaactgggcattgcctatgctcacagaccgagagaaggttgtgcagatcttggatcctgcactggagggtcaatattcattgaaagatgctgtccaagtggctgccattgctgccatgtgtgttcaacaagaggctgactacaggccactaatggctgatgtggttcaatcgttggttccgcttgtcaagaatcgttctactccaaagacgtgcaaccctagtgtccaagcgtag

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Protein seq

MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
AL Chr05 6641257 6642148 - OsCMeo_05g0007020.02 OsCMeo_05g0007020.02,OsCMeo_05g0007020.03 All

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 1.885929

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0207700 RBH 0.0 0.127680 0.502392
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g11750 RBH 0.0 0.084903 0.127862
Nipponbare | IRGSP 1.0 | RAP-db Os05g0207700 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0007080 RBH 0.0 1.351950 0.490114
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0007130 RBH 0.0 2.762444 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0007020 RBH 0.0 6.672543 15.324860
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0007070 RBH 0.0 0.118307 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0007170 RBH 0.0 6.693599 2.198930
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0100100 RBH 2.0078955 4.8404125 18.1265825
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0007020 RBH 0.0 0.082509 0.202367
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0099100 RBH 2.2249285 4.636801 37.394491
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0007070 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0007000 RBH 0.000000 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0007080 RBH 0.0 4.545192 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0007170 RBH 0.0 0.240242 0.180768
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0007120 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G006890 RBH 0.0 0.680112 1.174941
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0007140 RBH 0.0 2.024158 1.330381
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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