Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0100100 | OGI:05018110 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:6721251-6726354 | ||||||||
| Gene Symbol | RLCK182, OsRLCK182 | ||||||||||
| DNA seq | TGCATGAAAATGCTCAACTGGCAAATGTTTGTTTTTATAAGTTCCAGAATCCTACTATATACATATACAAAAAGATACATCGGCGATGTTTATAGGCCAAGCTGATGAGACCAACGTATTAGCACAAGAGTTAAGACAACGAACATGGATCTCCAAAGACACCTAACATAATTGACAAGCCAAAAGAAAATTCAGCAGTACATTGCAATTCTGCCAGCTGGAAACAACACTCTCTGATCATTCCCACAGGGCACAACCATAAGTACTAAGCCAAACCACCTAACATGATCACTAATTGCACATGACTAGAGGACTTCCCTTCAAACTGAAACTAGCTTTCTGGTCCATCGAACTAAATTAATGCTTGATTTCTAAATCTAACTGCTTACGATTCACCTCGCAAAATCAGGAATTCACTGGCAGAGGAAGAGAATTAAGTTATGGAGCATACTGATCTCATAAACTCAGCAGTAGTTGTTAGATGTAGATGAAAATTTCCAGAAAAGTCAAGCACCAACCTGGAAACTGAGCATTCAACTTCCCCTTCAAGTGGCTTCTACGCTTGGACACTAGGGTTGCACGTCTTTGGAGTAGAACGATTCTTGACAAGCGGAACCAACGATTGAACCACATCAGCCATTAGTGGCCTGTAGTCAGCCTCTTGTTGAACACACATGGCAGCAATGGCAGCCACTTGGACAGCATCTTTCAATGAATATTGACCCTCCAGTGCAGGATCCAAGATCTGCACAACCTTCTCTCGGTCTGTGAGCATAGGCAATGCCTGCATCAATGCAACTAGCCACAGGTCAGATATATGCAATGTTTAAATATTATTTTTGAAGATAAATAATTACATGGAACCTTTCCTACCTAGTATAACAAGAGAGGCAGATGGATCCTAATTAAGCTGTAACGTGATTCACTAGCATAAGAAAATGACAGGAATAATGAAGCAGAGTCGATTGAAGTGCATGGTAAATTTTAGTGTTGAAGTACATGTACTGATGTACCTTAGTACATATTGGTTCCTCACTTGGAAAGCATCTCAAACTTTTGCAACTGAAGTACTAAGTGTTCCATTACCTCATTTATACTATGAACTAAACAGTAGTACTAATTTTATAATTCCTGATGGTTGAAGAAAAACAGTTCAAAGTAAAGATACATCGGTACAACTATGTGATGGTCAGCTAATGTTCTTACCCAGTTAACTAGAACACCTTCGCCTGGAGGCCTCTTCATATCAACTGGCACCCTGCCAGTAAGCAACTCCAGAAGTACAACACCGTAACTATAGACATCGGATTTGGTCGTCAAATGCCCGGTCAAAGCATATCTTCAGAGTTTGTGTAGCATGCACCACATTAGAGACAGTATAATCAGTTCAACAATTCATTTATATTATCAAATCAAACAGTAAAATGGAAAAAGAATTGAATGTATCAGTATCAAACTCAAGTTCGTTCACAATGGGTTCAGAATTTGGTCTTACTCTGGTGCAACATAACCTTGTGTGCCTAGAACTCGAGTTGATACATGACCACCAGCTCTATCAGATCCAAGCTTAGCCAAACCAAAATCTGACACTCTTGCACGGAAGTCCTTGTCCAGTAGAATGTTGCTGCTCTTGAAGTCTCTGTGTATAACAGGTGGATTAACACGCTCGTGAAGATATTCCAGACCTTTTGCTGCTTCAAGAGCTATTCTCATTCTAGTAGGCCAGTCCAATTTTGAGATACCACCACAGGAACCTACAATGTCAGCTTTGTGGGATATCAGTTGACGAGAAAAATGGGCGCGCCTACAAATCGGGTGCCCGATATTTTTGTCAAAAATCGGGCGTTGTTTCACCAAGTAGATCGAAAATGTTTCAATCTTTTCAAAAGCTGAAACACAACCAAATCACCTCATGAAACATTTTGCTACAACGTATGAAACAAACAGTTTCCAGAAAATCAGGCGTTGTTTCACCCTATATAAAAACAATGTTTCAGCAAATATGAAAGAATGTTTCAATTCTTAAAAAAAAGTGAAACACGATCAGATCGCTAGATGAAACAATTTGGTTCAACGTATGCAACAAACGATTTAAAGCCATTGCAACACTTAAAACTCGTGTACATCAACAAACCACGTGTCCATCAAGTTGAAAATATTAAACAGTATCAAAAATTCACTGCAACATGTGATCCATACATAGGAAAACATCACGAGTATACTAGCTGAAACATTGTTGGTGGAACAAAAAATGAAACGGATCCCCCTTAATAGGGTGTTTCCATTATATCCGGGCGGCTGTTGCAATGGGCGCGCGTGGTGGGGGCGCATGGTGAGGGCGCGCGAGGCGTGGGCGGCGCGGGGCGCCTGATTTTTTTTCTCCCCATCGGGCGCCCGACGGGGAGGATTTCCGAAGAAAATTTGGCTGAATGAATACCATCACTAAAAAAGATATGCTACGGTAAATGACAAGGAAACATTTTCAGAAACTTCATATTTTCATATCAACCAAAAGAATTGAAATGTGGTAATCTGTAATTTCACAGTATGCCAACTACCTGCCCACTTTAAGGACTTAAAGCAGTATCAATGTATACCAATAAAGAAAGAACACAATGCATATGTAATGACTGCAATTTTGTAGTGAATTCACTTCACTTGTTTTCCAAACCATAACTTTTAGAACTATCTCGGCAGGCCATATATACAAGACTCAACAGATTAATAACTCAATTGTAAGGATGAAAAATAATGGTGGTGCTCTCTCAACAAAGGCCAGATGACCGATTTTACAATATTACAAGGCTTGATTTTTTTTTGTGGAAAAAACACCAGATTTTTAAGATTGAAGACACCTTGTTCACCATAGGACTAGCTAAGAGTTCTTATCTGGAAGAGAGAAGGCCTAAAACGGTCAGTTTCCACTTTCTTGTACAGTATTAAACAGACTAAAATCAGTAAATTCACACTGATAAGAGGTTAGCATGCTTTCCTTAGCAATTAAACCAAGCAAATAGTGTAGACAGTATATTTAAATACTATAGATCTAGGCCACTAAATTGCTAAAGCTTTACATGAATACATAAACCATTTCTTGATGAACTGGAAATTCTGTTTGATTCTTTTGACATTGTGACTTTGAGATAGGTGATTTGATAGGTTCACCAATTAGGTAAGTTCTCTTCTCTAACTGTCATTCCGAAGGGATAGTCAATCTTCAAGAGCATATGTAAACATCAAACAACGTATCCTATATCAGCATTACAGAGAATGTAATTATTTTCATTGCTATATCATGTATCCAGACCAAGCAGTCCCAATGGACTCATAGAATGGCAGAGGCAAATAGAGCTCTTGCACATTTTCGTTAATCCATGAACAGAATCTAGGGAAAAATTCATAATGAATTAGCATACGACCAATGGTGTCTAGTAATAAAAACCAAGGTACAGTACATGAAATATTCAACTCCCAATTCGTTTGTCTTCTGATATGTAATACTAAGCATCAAATTTAGAATTTTTATTCCTGTATTATTTGAATCTCACTTTCCCTCCTTTTAGTCAGATATAAGTTTGTTTCCTCAGCAAGACAACTGTTACAACTGCTCCATTTCTTCCCCTCAAAGTATCAGGACATAATAAGGTTATCAACCAAATACTTCATGTGCGCTAAAAGCAATTAATTCAGCTAGGTCCCTAGTTCTAGCTGTGGCATCACTAGTGTTTTGCAGTTTTGCCATCCAAAGACAATAGTCAACTAAGTTCAGGGATAGCTTCCCAGTCAATTTGCTCTCATAGTTTGGTGTTCAAATGTTGCAACACTTAACTAACAACATCAAACCTGCCTAAAAATCATTGTAAAATATCAAATTCAACTATAGTTGTAATTGGATGCTAAAAGGTGTGCATACCTCCATTTGGGTAGAGATGCTCCTGGAGACCCCCATTGGCCATGAATTCATAGACCAGCAGCCGGTGTCCACCCTCTGAACAATGGCCAATCAAGCCCAAAAGATAAGGTGATCGAAGCCGACTCAGCAGCTCCACCTGCCAAAAGATCACCAATGCCCCATATTAACCGCTCAAACTTGATTAGAACAGCTTAGAATTCCAGCAGTAGCAACATCATAACCCAGATTTACGGTAATTAGAGCTCCATGTGTGTGTTTAGAGCCAACTACAGGCCAAACCAAGCAACCGAACACTCCATTTTTGGAAACATCTTTGACAAGATGCCAAACCAAAACTAACCCCAATAGACGACAGTGACCCCATTTCGCTCGGAAACTCCGCAGTGTCTCATTGTCTCCATTGGACCGCAAAATTTCATCAACATATATAACTCGCAATGGGTGGTAAATTCGAATTTACCGCCCGTTGCATGTTATTCTGTCCCAGGCCCCAATCTCAGACGGAAACCCGCATTTCAATTGCTGGTAATTACTCGAAACGCAGATTATTTTTTTTACCTCCATCTCGAACTCCTCTTCCCCCTGCTTGCCGGGGCGATCCATGAGCTTGACCGCGACCTTCCTCCCATCGGGGAGCACCCCGCGGTAGACGGCCCCGAAGCTCCCCTGCCCCACCACGTGCGCCCGCCCGAACCCGCCCGTGGCGGCGTGCAGCTGGCGGTAGCTGAACACCTGGACGGCCCCCCTCTCCCCGCCGACCACGACCGCCGCCGCCGCGCCGTCGCTGGCGGAGTTGCTAGACGGGCTCTCCTTCCCGAGCGTCGGGGCATTCGCGGAAGGAGGAGGGGGAGGCAGCGGCGGGGGCATGGGAGGAGGCGAGGAGGAGGAGGAGCGGCGGTGGTGCTTGGGGAGGTCGAGCGAGTGGAGGCGGCGGGAGACCTTGCGGGTGATGTAGCAGTAGTAGGCGAAGGCGGCGACGAGGGAGAGGAGGGAGAGCGCCGCGAGGGAGACGATGACCATGAGTGCCACCGACTCCTCCCGCTTGTAGTCGTCGCCGCCGCCGCCGCCGCTCGACATTGGAACCCTAGGTCTCGGAGGTGGAGGAGGAGGAATGGAGGAGGGAATAGCGATCGCGAGAAGACGACGAGGGTTTTGAGGGGTTTGGGGGCGGAGGTGGGGGCGGAAGCGGAA
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| CDS seq | ATGTCGAGCGGCGGCGGCGGCGGCGACGACTACAAGCGGGAGGAGTCGGTGGCACTCATGGTCATCGTCTCCCTCGCGGCGCTCTCCCTCCTCTCCCTCGTCGCCGCCTTCGCCTACTACTGCTACATCACCCGCAAGGTCTCCCGCCGCCTCCACTCGCTCGACCTCCCCAAGCACCACCGCCGCTCCTCCTCCTCCTCGCCTCCTCCCATGCCCCCGCCGCTGCCTCCCCCTCCTCCTTCCGCGAATGCCCCGACGCTCGGGAAGGAGAGCCCGTCTAGCAACTCCGCCAGCGACGGCGCGGCGGCGGCGGTCGTGGTCGGCGGGGAGAGGGGGGCCGTCCAGGTGTTCAGCTACCGCCAGCTGCACGCCGCCACGGGCGGGTTCGGGCGGGCGCACGTGGTGGGGCAGGGGAGCTTCGGGGCCGTCTACCGCGGGGTGCTCCCCGATGGGAGGAAGGTCGCGGTCAAGCTCATGGATCGCCCCGGCAAGCAGGGGGAAGAGGAGTTCGAGATGGAGGTGGAGCTGCTGAGTCGGCTTCGATCACCTTATCTTTTGGGCTTGATTGGCCATTGTTCAGAGGGTGGACACCGGCTGCTGGTCTATGAATTCATGGCCAATGGGGGTCTCCAGGAGCATCTCTACCCAAATGGAGGTTCCTGTGGTGGTATCTCAAAATTGGACTGGCCTACTAGAATGAGAATAGCTCTTGAAGCAGCAAAAGGTCTGGAATATCTTCACGAGCGTGTTAATCCACCTGTTATACACAGAGACTTCAAGAGCAGCAACATTCTACTGGACAAGGACTTCCGTGCAAGAGTGTCAGATTTTGGTTTGGCTAAGCTTGGATCTGATAGAGCTGGTGGTCATGTATCAACTCGAGTTCTAGGCACACAAGGTTATGTTGCACCAGAGGTGCCAGTTGATATGAAGAGGCCTCCAGGCGAAGGTGTTCTAGTTAACTGGGCATTGCCTATGCTCACAGACCGAGAGAAGGTTGTGCAGATCTTGGATCCTGCACTGGAGGGTCAATATTCATTGAAAGATGCTGTCCAAGTGGCTGCCATTGCTGCCATGTGTGTTCAACAAGAGGCTGACTACAGGCCACTAATGGCTGATGTGGTTCAATCGTTGGTTCCGCTTGTCAAGAATCGTTCTACTCCAAAGACGTGCAACCCTAGTGTCCAAGCGTAG
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| Protein seq | MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEVPVDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA |
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| Function | Receptor-like serine/threonine-protein kinase ALE2 [UniProtKB/Swiss-Prot:Q8RWW0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0100100 | OsMH63_05T0100100-mRNA-1 | Chr05 | 6721251 | 6726354 | - | maker | ||
| CDS seq | ATGTCGAGCGGCGGCGGCGGCGGCGACGACTACAAGCGGGAGGAGTCGGTGGCACTCATGGTCATCGTCTCCCTCGCGGCGCTCTCCCTCCTCTCCCTCGTCGCCGCCTTCGCCTACTACTGCTACATCACCCGCAAGGTCTCCCGCCGCCTCCACTCGCTCGACCTCCCCAAGCACCACCGCCGCTCCTCCTCCTCCTCGCCTCCTCCCATGCCCCCGCCGCTGCCTCCCCCTCCTCCTTCCGCGAATGCCCCGACGCTCGGGAAGGAGAGCCCGTCTAGCAACTCCGCCAGCGACGGCGCGGCGGCGGCGGTCGTGGTCGGCGGGGAGAGGGGGGCCGTCCAGGTGTTCAGCTACCGCCAGCTGCACGCCGCCACGGGCGGGTTCGGGCGGGCGCACGTGGTGGGGCAGGGGAGCTTCGGGGCCGTCTACCGCGGGGTGCTCCCCGATGGGAGGAAGGTCGCGGTCAAGCTCATGGATCGCCCCGGCAAGCAGGGGGAAGAGGAGTTCGAGATGGAGGTGGAGCTGCTGAGTCGGCTTCGATCACCTTATCTTTTGGGCTTGATTGGCCATTGTTCAGAGGGTGGACACCGGCTGCTGGTCTATGAATTCATGGCCAATGGGGGTCTCCAGGAGCATCTCTACCCAAATGGAGGTTCCTGTGGTGGTATCTCAAAATTGGACTGGCCTACTAGAATGAGAATAGCTCTTGAAGCAGCAAAAGGTCTGGAATATCTTCACGAGCGTGTTAATCCACCTGTTATACACAGAGACTTCAAGAGCAGCAACATTCTACTGGACAAGGACTTCCGTGCAAGAGTGTCAGATTTTGGTTTGGCTAAGCTTGGATCTGATAGAGCTGGTGGTCATGTATCAACTCGAGTTCTAGGCACACAAGGTTATGTTGCACCAGAGGTGCCAGTTGATATGAAGAGGCCTCCAGGCGAAGGTGTTCTAGTTAACTGGGCATTGCCTATGCTCACAGACCGAGAGAAGGTTGTGCAGATCTTGGATCCTGCACTGGAGGGTCAATATTCATTGAAAGATGCTGTCCAAGTGGCTGCCATTGCTGCCATGTGTGTTCAACAAGAGGCTGACTACAGGCCACTAATGGCTGATGTGGTTCAATCGTTGGTTCCGCTTGTCAAGAATCGTTCTACTCCAAAGACGTGCAACCCTAGTGTCCAAGCGTAG
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| Protein seq | MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEVPVDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.0078955 | 4.8404125 | 18.1265825 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0207700 | RBH | 0.0 | 0.127680 | 0.502392 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g11750 | RBH | 0.0 | 0.084903 | 0.127862 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0207700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0007080 | RBH | 0.0 | 1.351950 | 0.490114 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0007130 | RBH | 0.0 | 2.762444 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0007020 | RBH | 0.000000 | 0.000000 | 1.885929 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0007070 | RBH | 0.0 | 0.118307 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0007170 | RBH | 0.0 | 6.693599 | 2.198930 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0085200 | RBH | 4.932788 | 3.3133445 | 2.788549 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0007020 | RBH | 0.0 | 0.082509 | 0.202367 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0099100 | RBH | 2.2249285 | 4.636801 | 37.394491 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0007070 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0007000 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0007080 | RBH | 0.0 | 4.545192 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0007170 | RBH | 0.0 | 0.240242 | 0.180768 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0007120 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G006890 | RBH | 0.0 | 0.680112 | 1.174941 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0007140 | RBH | 0.0 | 2.024158 | 1.330381 |
