Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os02g34750		OGI:02001240 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr02:20839687-20846214		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		OGG, Ogg, OsOGG
DNA seq		TTTAGCATTCACTTTCGAATTGTATATATATGCAAATGTATGTATAACTCTCTGTACAAGTTTGAGGTCTTCAGACATAAACCATAGCGTGTATTTGTGTCATATAAGGCTGTGTTAGGGAACTAATCCCTCCAACCTGCAAAACAGAATGATTCGTTAGCGCTTGATTAATTAAGTATTAGCCTTTTTCGAAAATGGATTAATATGACTTTTTTTAAACAACTTTCGTATAGTAAATTTTTGAAAAAACTAATCGTTTAATAGCTTGGGAAGCGTGCGCACGAAAAACGAGAGAAGTGAGTTGAGAAAGAAGGGGGAAGAACACGGCCTAAGACCCTGTTCAGATGGGACTAAAACTTTTAAGTCCCTATCACATCAGATGTTTGGATATTAATTATAAATATTAAACATAGATTATTAATAAAACCCATCCATAATTTTGGACTAATTCACGAGACGAATCTATTAAGTCTAATTAATCCATGATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGGTTAATTAGGCTTAAAAAATTTATCTCACAAATTAGCTTTCATTTATGTAATTAGTTTTGTAAATAATCTATATTTTTAATACTCTAAATTAGTGTCTAAATACAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCACCTAAGTAATATAAGGTTTCATGGTCGTTTGGAACTTAAATTAAACACTAAACACTATAGAGAACTTGGATAAATTGATCACTCAGTATAAACACTATAGAGAATTTGGATAAATTAAACACTCCAAATCAAAATGAGAAAAAAAACACGTACTTACCTTCCTCGCCACATATTAAAGTTTTCTAAAGTTTGTTGATTTTACATTATTCTATGCTTAGTTGTCAAAACATGTATTATCTTTTGACATCAATATAGTCGTAGCGTTAGCACGTGCATATTACTAGTTAAAATAACTTTAAAAACAAGAGAGAAATGGTGCTGGTAGAAAAGCACGTGCATATTACTAGTTAAAATAACTTTAAAAACAAGAGAGAAATGGTGCTGGTAGAAAAGGGATGAACTCATAGGGGATTCCTGCTATTTCCCTTAGATATAAGCAGATGGTTAATTCAAATAAACAGCGCACAAATTAATAGCGTAGGGATGAGTTCTAACAATGGTAAGATATCCTGCAATGTTCAGGAGACTCATTTACCATAATAATCTTCCAATGCAAAACAACCTAGAGACCAGAAAGTCTGTCGGCAAGAATTAAATTTGGGCACTTCTCAAAACCATGGTAGGTAGCTGGTACAGGATAGAATACGAAATCACAGCCTGCAAACCACAAAAAAATGAAACAGATATGAGCGCTAAAGAACAACTTGAACTTTTTCTTTTTTATCAGCTTCTCAACAAAATACCAGTTTTCTGAATGTGCTCCTCTATCGTGGATGTGCCCACAGCAGTCCGTACCTACTCGGCATTTGAACGCCTCGTTGTAAGGTACTAACCACCAAAGCATCATAAAGGTATGGAACACCAAGCTACATGATGTTAAAAAGAAGTTAAGAAAAAAGAACTGTTGTGTTGTAGATGCTAGGAAGAAAATGATTATTATAAAAGAATCCAGTGAAATTGAAAAATTATTCAGATCCTATCACTGCTTTTCAAAATCCTTCATTTGAATTAACATTGCTCTCAACTCTTGAGTAGTGTTACCTAAATTGTTTCAGAAACTTATTTTCATTTGCATCAATAACCAATCTTTGGTTTATAATCGCTTTGTAAACAGGCCATGCAAGCCGTTTTATATAAATGAAGACAGTAAGCGCAATGCAAAATACTACTCCCTCCTTCCCAAATTGATCATTAAGCCCTTGAGACTCTTAACATCAACAGATGTGCCCTTGAGACTCTTAACATCAAGCCCACAAAAGAGGCAACTTCTATAAGTTCATAAAAAAAAATGAAAACAATTCCAATCCACACCACACAGGGCCAGTGTGATTTATTCTCATGCCAACAGCCTTAGCTACACGACAGCACCATTATAGGGATACAACATCTACCAAGCATGTCTCGTGCAACATAACAATATCTATTTATTGGCAATTATACAGATGAGATCACTAATTTGTTGCCAACAACTTTAAACTTTGCTATGTCAAAATCAGTGGGCATTCATGCATATAACAAGACAAAATTAAAATTGAAGATTTTGAACAATATCTTTGACAAGCAGGCCAAGTCAACAAAGTCTCAGGAAAAAAGCTATCAATGTTTCAAAAAAGTCAGAATAAATGACTCGACATTCCTATGTCACTAGGCCATAACCCAGAAGTTGCTAAGGCTATAACCCAGAAGTTGCTAACAAGCATTTTTAATGTAATCAATATTCAATATACCTTGAATTGGATCCTACTACCACGAGAGTTGCCATTGTGTTCTAAGAACAATTCTGAAATGTGGAAACATTTATCAGAACTTTGTGCCACTGAGATTATAGAAATCCCAGGACCATATATGTTAATGATCCATCGTCAAATCAAATATTTTACTCGATGTAACGTAGAGCAGAATGTAGTGCAAACTGGTTAAATAATTTGATATCCCCGCAATAAATAACACAACTTTAGTTAGTGAATGTCAAACATGTTATGGTTACTGAAACAAAACCGCGTGTAAAGTCAACCTTGGCATTGTCTCTACATGTGATATTTCTTGTCATGTTTTGACATTGTTTCCACTACGCTTCCTTTTAGTAGGTTTCGTGGAAGTGTTTGTAGTTTCAGCAACCATGAGTTTTTGAGCAGACAGCTGGCCAATAAAGAGAACATTCTGTGCCCAACCAGCATAGTTCCCAAATTTAGCAACAAATGCATCGGCAACAGCAACACTAAGTTTTGGGGTTAAGCTCTTGCCAGCTAGCTCCGGCATCAGATATTGTGTAGCAACCTGCATTAAATCCATATAGGAAGGGCTTAAAAACAAAATACAATTGTTTGTAGGTCATATAAAACTCATGTGAAAAAACCTCCTTCACAAGACTTCCCATCAACTTTAATTGTTTTTATGTCTAGAGAGTGAAGTCAATTGTGAATACATTGAATACTATTTCCCATTCAAATGATGAAAGTCCCACCCTCACCCAACTAAAAAAAATGAAAAAGGGCAAACCTTGTTATGCAGAGCTTATGGTTCAACAAAAATTGGAAGTAAATATGATCAGGGTAGAATGTGCAAAACAGGTTCCCATTCAAATAGTAAGAATGTGTAAAATGATAGTGAGGGAACTGACATGGATGTGAATTAATTAATTTTATCAACAATTTTTCATGGAAAAGTCTATGCATACTAAAATTTTCTTACAAAATTCTTACAAACTCTAATGTGGTAAGCCGTGAGTAAATCTAGATTTGTTGCAACTTCCATCTAGTTAAATCAAACGGTTGAGACATTTGTTAGTATAAGAGTTTTGTAAGAAAATTTTATTATGTGTAGCAGTACTCATTTTCATACCTTCCAGACATGTGTGTCAACAGGAATAGCATGGTTCTGATCGAGTGAGAACAAAGCAACACAGGCTGCAACTTTTGGCCCAACACCTGGAAGGGTGCAAAGAGCCTCAATCACCTCCGGGAGTTCCCTTGTACGCAATGAGGCAAGCCATTTCTCGCCTCCACCAGGCTTGGCCTGTAATATTTTAGCAGTGCCGACGATGTACTTTGCCCTGTTCATTTATTAGAACACAGCATTTGCTCAAATCAGTGTGCTATTGACTAGTATCTCAAATCAAATGTAGTATACATAATATGATAGAACTGAGTTATGATTCAAGCAATCCAAACAAGTGTTACGCCTGATTCAAAATGTTATTTCCCCAAAGCTGAAACCTCACCACACAAATGTGAAGTTGAGATTCTCTACATATTCATCGTATAAACAGTAATGGTAGGATCATCGTTTTATCGTCTACGAGCTCTGCTATTATCAGCACATTGATATAGCACGCGAATTTAGTCACCCATTATGTCTGAATTATAATTAACACAAGATCTAGATCCTACCAATGCCAAATGGGTTAATTGGAAAATACAAAGTAAGCATCAAAATGAACCTATAGATGCTTCAACCAATACTACTCCAACATAAGTAACAATGACTATAGATGAAAATCCTTTGTGAACTGACCTGTACCCGAACCCGGCATCCCGGAGCTCTTGCTCCGACACGCGCGCGAGCCGCTCGATCGTGGGGAATTGGTGGAATTGGTATCCTCCAACCTCGCCGAGCCGCTCCCCGTAGCCGGCCAGCGCCCACACCATCTTCTCGATCCGCGCGATGTTGTTGTTGGAGGAGCAGAGGAACTGGAACACGCACTCGACGGGGTCCTGCCTGAGCACCCGGGCGCCGCCGCCCCCGAGCCGCGCGGAGACCTCCGCGAACCGCGCGTCCGCGGCGGCGAACCGGCGCCAGAGGTCGGCGAGCGGCACGGCGGCGTTGAGGTAGTCGGAGAGCGCGGCGCGGGCCGCCGCGGGGACGGAGGAGGAGGAGGAGCCGCCGTTGTTGTGGAGGAGGAAGGCGAGGCGGCCGTCGGAGGACGGGAGGTGGGAGAGGGAGACGAGGTGAGGCCCCACGGCGCCGGTGAAGCGGAGCGGGGAGAGAGACGTGCGGCGCCACAGGAAGGTCTGCCCCGTGGGGAGGGTGAGCGGGAGGGACAGGTCGGCGGCGGAGAGCGGCAGGGGGTGCCACTCTCCGTCCTCCTCCTCGACGGCGGCGGCGGAGACGAGGGGGAGGCGGCGGCGGGCGGGAGGAGGGCGGCGGTCGGCGGCCTCGGATTTGGGGGTGCCCACGGGCGGGGTTGGCGGTGGTGTTGCGGTGGTGGAAGAGAGGAGGGGAGGGGAGGGTGGGAGCGGCGGCCGGACTCGGCGGCGGCGGCGAGGTGGCATCCCGGCGGCGGCGGCGGCGGCAACGGTCGGAAGGGGAGGATGACACCCCATGAACAGCTCAAAGACGAGCACTCCAAAGCTGTAAACATCGCACTTCTCCGTCACCCTTGTTGTATATGCTAGCTCTGCCACATCAATATTAAGACCTTGTTTCAATAAATTTGTATAGAAGGAATTCTATTCTATTTTGTACAATCTAAGATGCATCTTTGCGAGGTTGACTATAATAACTATTATCAGAAAATACTAATGAGATGAATGCCTAAGCTGTTAGCTCAAATACTTGTCAAAATGTTAACAAAAAATACAAGAGGATAAAGTAACTGATACATTATAAAATTTTACCTGGAGCAAGATAACCTTTTGTCCCAGCAAGCTTTGTGCAGTTCGATGCCTCTACATCTAGAATTTTGGCGATACCAAAATCAGATATGCAAGCTCTGAATTCCAGATCAAGCAAAATGTTGTTGCTTGTTATATCTCGATGGACTATGGGTGCAAAGCAATCATGATGTATGTAAGACAAAGCATTATCAACATCCTTTACAATATTTATCCTTCGCATCCAATCCAACTCAATTGCAGTGTTATGGTTCTCCAAATATCTTGACAAGCTTCCTCTATCCATGTATTCATAGACAAGAAATTTGACGTGAACTGCAGAACAGTACCCAAAGAGTTTCACAATATTTCGATGCCGAATACTCATCAAAGCATCTACTTCCCGCTTAAATATTAGCTCGTCATCTTCCGTCATATGAATTTTCTTTACTGCAAATATCTCGCCTGTTGGCAATTGAGCTCTGTAGACAGATCCGTTTCCTCCCATACCAATGCAATGAGTTCCATTGAAATTCTCTGTGGCTTCAAAACTCTGCTTGCACACATCTCCTCCATCAAAGTTCCAGACTGAAAACACTTTTGTGTTTCCAGCTCCATTTTCACTTTGCTCCACAGATTTCATCTTTCTGCGTTGCCATGTCACAAGTGCTGTGATGAACAGAACAGATATGCCAGCAGCAGCAGCAACACCAAGTAAAATGGGTCTGAATTTCTTTCCTTTGCCACCTTTCTGAATAAGGTTGCAAGGTGGTAAAGCTTTGACTGTACCACACAAGTGTTTATTATGCACGAACCACTCAACTGGAGCTTCTTCCAAGAACTTAATGTGTGGCACTGGCCCTTCCAAATTATTGTAAGACACATCCATGGATGAGAGGCTGATCATACCCTTAAATGATGGTGGTATGCTGCCATTTAATGTGTTGTGTGAAAGATTGAGGGCTTCAAGCATGTTCAAACCACTCAGCTGACTTGGTATGATCCCGGCAAATGAATTGTCACTTAAATCCAACAATTCTTGAAGGTATGTCAGCATCCCTAGTTTAATAGGTATGCTTCCTCCGAGGTGATTATGTCCCAGCCTTAGTGATTGAAGTTTCAAACAGTTCTCAATTGATCCCTGTATTGGTCCGCTTAGGTTGTTCAATGATAAATCCAAATACTCGAGATTCTGTAGAGAACCTAGTTCCTCTGGTATGTTTCCATGGAGCAAGTTGTTCGCGAGGCTCAAATTGAATAGAGACACCAT More
CDS seq		ATGGTGTCTCTATTCAATTTGAGCCTCGCGAACAACTTGCTCCATGGAAACATACCAGAGGAACTAGGTTCTCTACAGAATCTCGAGTATTTGGATTTATCATTGAACAACCTAAGCGGACCAATACAGGGATCAATTGAGAACTGTTTGAAACTTCAATCACTAAGGCTGGGACATAATCACCTCGGAGGAAGCATACCTATTAAACTAGGGATGCTGACATACCTTCAAGAATTGTTGGATTTAAGTGACAATTCATTTGCCGGGATCATACCAAGTCAGCTGAGTGGTTTGAACATGCTTGAAGCCCTCAATCTTTCACACAACACATTAAATGGCAGCATACCACCATCATTTAAGGGTATGATCAGCCTCTCATCCATGGATGTGTCTTACAATAATTTGGAAGGGCCAGTGCCACACATTAAGTTCTTGGAAGAAGCTCCAGTTGAGTGGTTCGTGCATAATAAACACTTGTGTGGTACAGTCAAAGCTTTACCACCTTGCAACCTTATTCAGAAAGGTGGCAAAGGAAAGAAATTCAGACCCATTTTACTTGGTGTTGCTGCTGCTGCTGGCATATCTGTTCTGTTCATCACAGCACTTGTGACATGGCAACGCAGAAAGATGAAATCTGTGGAGCAAAGTGAAAATGGAGCTGGAAACACAAAAGTGTTTTCAGTCTGGAACTTTGATGGAGGAGATGTGTGCAAGCAGAGTTTTGAAGCCACAGAGAATTTCAATGGAACTCATTGCATTGGTATGGGAGGAAACGGATCTGTCTACAGAGCTCAATTGCCAACAGGCGAGATATTTGCAGTAAAGAAAATTCATATGACGGAAGATGACGAGCTAATATTTAAGCGGGAAGTAGATGCTTTGATGAGTATTCGGCATCGAAATATTGTGAAACTCTTTGGGTACTGTTCTGCAGTTCACGTCAAATTTCTTGTCTATGAATACATGGATAGAGGAAGCTTGTCAAGATATTTGGAGAACCATAACACTGCAATTGAGTTGGATTGGATGCGAAGGATAAATATTGTAAAGGATGTTGATAATGCTTTGTCTTACATACATCATGATTGCTTTGCACCCATAGTCCATCGAGATATAACAAGCAACAACATTTTGCTTGATCTGGAATTCAGAGCTTGCATATCTGATTTTGGTATCGCCAAAATTCTAGATGTAGAGGCATCGAACTGCACAAAGCTTGCTGGGACAAAAGGTTATCTTGCTCCAGAGCTAGCATATACAACAAGGGTGACGGAGAAGTGCGATGTTTACAGCTTTGGAGTGCTCGTCTTTGAGCTGTTCATGGGGTGTCATCCTCCCCTTCCGACCGTTGCCGCCGCCGCCGCCGCCGGGATGCCACCTCGCCGCCGCCGCCGAGTCCGGCCGCCGCTCCCACCCTCCCCTCCCCTCCTCTCTTCCACCACCGCAACACCACCGCCAACCCCGCCCGTGGGCACCCCCAAATCCGAGGCCGCCGACCGCCGCCCTCCTCCCGCCCGCCGCCGCCTCCCCCTCGTCTCCGCCGCCGCCGTCGAGGAGGAGGACGGAGAGTGGCACCCCCTGCCGCTCTCCGCCGCCGACCTGTCCCTCCCGCTCACCCTCCCCACGGGGCAGACCTTCCTGTGGCGCCGCACGTCTCTCTCCCCGCTCCGCTTCACCGGCGCCGTGGGGCCTCACCTCGTCTCCCTCTCCCACCTCCCGTCCTCCGACGGCCGCCTCGCCTTCCTCCTCCACAACAACGGCGGCTCCTCCTCCTCCTCCGTCCCCGCGGCGGCCCGCGCCGCGCTCTCCGACTACCTCAACGCCGCCGTGCCGCTCGCCGACCTCTGGCGCCGGTTCGCCGCCGCGGACGCGCGGTTCGCGGAGGTCTCCGCGCGGCTCGGGGGCGGCGGCGCCCGGGTGCTCAGGCAGGACCCCGTCGAGTGCGTGTTCCAGTTCCTCTGCTCCTCCAACAACAACATCGCGCGGATCGAGAAGATGGTGTGGGCGCTGGCCGGCTACGGGGAGCGGCTCGGCGAGGTTGGAGGATACCAATTCCACCAATTCCCCACGATCGAGCGGCTCGCGCGCGTGTCGGAGCAAGAGCTCCGGGATGCCGGGTTCGGGTACAGGGCAAAGTACATCGTCGGCACTGCTAAAATATTACAGGCCAAGCCTGGTGGAGGCGAGAAATGGCTTGCCTCATTGCGTACAAGGGAACTCCCGGAGGTGATTGAGGCTCTTTGCACCCTTCCAGGTGTTGGGCCAAAAGTTGCAGCCTGTGTTGCTTTGTTCTCACTCGATCAGAACCATGCTATTCCTGTTGACACACATGTCTGGAAGGTTGCTACACAATATCTGATGCCGGAGCTAGCTGGCAAGAGCTTAACCCCAAAACTTAGTGTTGCTGTTGCCGATGCATTTGTTGCTAAATTTGGGAACTATGCTGGTTGGGCACAGAATGTTCTCTTTATTGGCCAGCTGTCTGCTCAAAAACTCATGGTTGCTGAAACTACAAACACTTCCACGAAACCTACTAAAAGGAAGCGTAGTGGAAACAATGTCAAAACATGA More
Protein seq		MVSLFNLSLANNLLHGNIPEELGSLQNLEYLDLSLNNLSGPIQGSIENCLKLQSLRLGHNHLGGSIPIKLGMLTYLQELLDLSDNSFAGIIPSQLSGLNMLEALNLSHNTLNGSIPPSFKGMISLSSMDVSYNNLEGPVPHIKFLEEAPVEWFVHNKHLCGTVKALPPCNLIQKGGKGKKFRPILLGVAAAAGISVLFITALVTWQRRKMKSVEQSENGAGNTKVFSVWNFDGGDVCKQSFEATENFNGTHCIGMGGNGSVYRAQLPTGEIFAVKKIHMTEDDELIFKREVDALMSIRHRNIVKLFGYCSAVHVKFLVYEYMDRGSLSRYLENHNTAIELDWMRRINIVKDVDNALSYIHHDCFAPIVHRDITSNNILLDLEFRACISDFGIAKILDVEASNCTKLAGTKGYLAPELAYTTRVTEKCDVYSFGVLVFELFMGCHPPLPTVAAAAAAGMPPRRRRRVRPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADRRPPPARRRLPLVSAAAVEEEDGEWHPLPLSAADLSLPLTLPTGQTFLWRRTSLSPLRFTGAVGPHLVSLSHLPSSDGRLAFLLHNNGGSSSSSVPAAARAALSDYLNAAVPLADLWRRFAAADARFAEVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWALAGYGERLGEVGGYQFHQFPTIERLARVSEQELRDAGFGYRAKYIVGTAKILQAKPGGGEKWLASLRTRELPEVIEALCTLPGVGPKVAACVALFSLDQNHAIPVDTHVWKVATQYLMPELAGKSLTPKLSVAVADAFVAKFGNYAGWAQNVLFIGQLSAQKLMVAETTNTSTKPTKRKRSGNNVKT
Function		N-glycosylase/DNA lyase OGG1 [UniProtKB/Swiss-Prot:Q9FNY7]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os02g34750	LOC_Os02g34750.1	Chr02	20839687	20846214	-	MSU_osa1r7
CDS seq	ATGGTGTCTCTATTCAATTTGAGCCTCGCGAACAACTTGCTCCATGGAAACATACCAGAGGAACTAGGTTCTCTACAGAATCTCGAGTATTTGGATTTATCATTGAACAACCTAAGCGGACCAATACAGGGATCAATTGAGAACTGTTTGAAACTTCAATCACTAAGGCTGGGACATAATCACCTCGGAGGAAGCATACCTATTAAACTAGGGATGCTGACATACCTTCAAGAATTGTTGGATTTAAGTGACAATTCATTTGCCGGGATCATACCAAGTCAGCTGAGTGGTTTGAACATGCTTGAAGCCCTCAATCTTTCACACAACACATTAAATGGCAGCATACCACCATCATTTAAGGGTATGATCAGCCTCTCATCCATGGATGTGTCTTACAATAATTTGGAAGGGCCAGTGCCACACATTAAGTTCTTGGAAGAAGCTCCAGTTGAGTGGTTCGTGCATAATAAACACTTGTGTGGTACAGTCAAAGCTTTACCACCTTGCAACCTTATTCAGAAAGGTGGCAAAGGAAAGAAATTCAGACCCATTTTACTTGGTGTTGCTGCTGCTGCTGGCATATCTGTTCTGTTCATCACAGCACTTGTGACATGGCAACGCAGAAAGATGAAATCTGTGGAGCAAAGTGAAAATGGAGCTGGAAACACAAAAGTGTTTTCAGTCTGGAACTTTGATGGAGGAGATGTGTGCAAGCAGAGTTTTGAAGCCACAGAGAATTTCAATGGAACTCATTGCATTGGTATGGGAGGAAACGGATCTGTCTACAGAGCTCAATTGCCAACAGGCGAGATATTTGCAGTAAAGAAAATTCATATGACGGAAGATGACGAGCTAATATTTAAGCGGGAAGTAGATGCTTTGATGAGTATTCGGCATCGAAATATTGTGAAACTCTTTGGGTACTGTTCTGCAGTTCACGTCAAATTTCTTGTCTATGAATACATGGATAGAGGAAGCTTGTCAAGATATTTGGAGAACCATAACACTGCAATTGAGTTGGATTGGATGCGAAGGATAAATATTGTAAAGGATGTTGATAATGCTTTGTCTTACATACATCATGATTGCTTTGCACCCATAGTCCATCGAGATATAACAAGCAACAACATTTTGCTTGATCTGGAATTCAGAGCTTGCATATCTGATTTTGGTATCGCCAAAATTCTAGATGTAGAGGCATCGAACTGCACAAAGCTTGCTGGGACAAAAGGTTATCTTGCTCCAGAGCTAGCATATACAACAAGGGTGACGGAGAAGTGCGATGTTTACAGCTTTGGAGTGCTCGTCTTTGAGCTGTTCATGGGGTGTCATCCTCCCCTTCCGACCGTTGCCGCCGCCGCCGCCGCCGGGATGCCACCTCGCCGCCGCCGCCGAGTCCGGCCGCCGCTCCCACCCTCCCCTCCCCTCCTCTCTTCCACCACCGCAACACCACCGCCAACCCCGCCCGTGGGCACCCCCAAATCCGAGGCCGCCGACCGCCGCCCTCCTCCCGCCCGCCGCCGCCTCCCCCTCGTCTCCGCCGCCGCCGTCGAGGAGGAGGACGGAGAGTGGCACCCCCTGCCGCTCTCCGCCGCCGACCTGTCCCTCCCGCTCACCCTCCCCACGGGGCAGACCTTCCTGTGGCGCCGCACGTCTCTCTCCCCGCTCCGCTTCACCGGCGCCGTGGGGCCTCACCTCGTCTCCCTCTCCCACCTCCCGTCCTCCGACGGCCGCCTCGCCTTCCTCCTCCACAACAACGGCGGCTCCTCCTCCTCCTCCGTCCCCGCGGCGGCCCGCGCCGCGCTCTCCGACTACCTCAACGCCGCCGTGCCGCTCGCCGACCTCTGGCGCCGGTTCGCCGCCGCGGACGCGCGGTTCGCGGAGGTCTCCGCGCGGCTCGGGGGCGGCGGCGCCCGGGTGCTCAGGCAGGACCCCGTCGAGTGCGTGTTCCAGTTCCTCTGCTCCTCCAACAACAACATCGCGCGGATCGAGAAGATGGTGTGGGCGCTGGCCGGCTACGGGGAGCGGCTCGGCGAGGTTGGAGGATACCAATTCCACCAATTCCCCACGATCGAGCGGCTCGCGCGCGTGTCGGAGCAAGAGCTCCGGGATGCCGGGTTCGGGTACAGGGCAAAGTACATCGTCGGCACTGCTAAAATATTACAGGCCAAGCCTGGTGGAGGCGAGAAATGGCTTGCCTCATTGCGTACAAGGGAACTCCCGGAGGTGATTGAGGCTCTTTGCACCCTTCCAGGTGTTGGGCCAAAAGTTGCAGCCTGTGTTGCTTTGTTCTCACTCGATCAGAACCATGCTATTCCTGTTGACACACATGTCTGGAAGGTTGCTACACAATATCTGATGCCGGAGCTAGCTGGCAAGAGCTTAACCCCAAAACTTAGTGTTGCTGTTGCCGATGCATTTGTTGCTAAATTTGGGAACTATGCTGGTTGGGCACAGAATGTTCTCTTTATTGGCCAGCTGTCTGCTCAAAAACTCATGGTTGCTGAAACTACAAACACTTCCACGAAACCTACTAAAAGGAAGCGTAGTGGAAACAATGTCAAAACATGA More
Protein seq	MVSLFNLSLANNLLHGNIPEELGSLQNLEYLDLSLNNLSGPIQGSIENCLKLQSLRLGHNHLGGSIPIKLGMLTYLQELLDLSDNSFAGIIPSQLSGLNMLEALNLSHNTLNGSIPPSFKGMISLSSMDVSYNNLEGPVPHIKFLEEAPVEWFVHNKHLCGTVKALPPCNLIQKGGKGKKFRPILLGVAAAAGISVLFITALVTWQRRKMKSVEQSENGAGNTKVFSVWNFDGGDVCKQSFEATENFNGTHCIGMGGNGSVYRAQLPTGEIFAVKKIHMTEDDELIFKREVDALMSIRHRNIVKLFGYCSAVHVKFLVYEYMDRGSLSRYLENHNTAIELDWMRRINIVKDVDNALSYIHHDCFAPIVHRDITSNNILLDLEFRACISDFGIAKILDVEASNCTKLAGTKGYLAPELAYTTRVTEKCDVYSFGVLVFELFMGCHPPLPTVAAAAAAGMPPRRRRRVRPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADRRPPPARRRLPLVSAAAVEEEDGEWHPLPLSAADLSLPLTLPTGQTFLWRRTSLSPLRFTGAVGPHLVSLSHLPSSDGRLAFLLHNNGGSSSSSVPAAARAALSDYLNAAVPLADLWRRFAAADARFAEVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWALAGYGERLGEVGGYQFHQFPTIERLARVSEQELRDAGFGYRAKYIVGTAKILQAKPGGGEKWLASLRTRELPEVIEALCTLPGVGPKVAACVALFSLDQNHAIPVDTHVWKVATQYLMPELAGKSLTPKLSVAVADAFVAKFGNYAGWAQNVLFIGQLSAQKLMVAETTNTSTKPTKRKRSGNNVKT More

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os02g34750	LOC_Os02g34750.2	Chr02	20840761	20846214	-	MSU_osa1r7
CDS seq	ATGGTGTCTCTATTCAATTTGAGCCTCGCGAACAACTTGCTCCATGGAAACATACCAGAGGAACTAGGTTCTCTACAGAATCTCGAGTATTTGGATTTATCATTGAACAACCTAAGCGGACCAATACAGGGATCAATTGAGAACTGTTTGAAACTTCAATCACTAAGGCTGGGACATAATCACCTCGGAGGAAGCATACCTATTAAACTAGGGATGCTGACATACCTTCAAGAATTGTTGGATTTAAGTGACAATTCATTTGCCGGGATCATACCAAGTCAGCTGAGTGGTTTGAACATGCTTGAAGCCCTCAATCTTTCACACAACACATTAAATGGCAGCATACCACCATCATTTAAGGGTATGATCAGCCTCTCATCCATGGATGTGTCTTACAATAATTTGGAAGGGCCAGTGCCACACATTAAGTTCTTGGAAGAAGCTCCAGTTGAGTGGTTCGTGCATAATAAACACTTGTGTGGTACAGTCAAAGCTTTACCACCTTGCAACCTTATTCAGAAAGGTGGCAAAGGAAAGAAATTCAGACCCATTTTACTTGGTGTTGCTGCTGCTGCTGGCATATCTGTTCTGTTCATCACAGCACTTGTGACATGGCAACGCAGAAAGATGAAATCTGTGGAGCAAAGTGAAAATGGAGCTGGAAACACAAAAGTGTTTTCAGTCTGGAACTTTGATGGAGGAGATGTGTGCAAGCAGAGTTTTGAAGCCACAGAGAATTTCAATGGAACTCATTGCATTGGTATGGGAGGAAACGGATCTGTCTACAGAGCTCAATTGCCAACAGGCGAGATATTTGCAGTAAAGAAAATTCATATGACGGAAGATGACGAGCTAATATTTAAGCGGGAAGTAGATGCTTTGATGAGTATTCGGCATCGAAATATTGTGAAACTCTTTGGGTACTGTTCTGCAGTTCACGTCAAATTTCTTGTCTATGAATACATGGATAGAGGAAGCTTGTCAAGATATTTGGAGAACCATAACACTGCAATTGAGTTGGATTGGATGCGAAGGATAAATATTGTAAAGGATGTTGATAATGCTTTGTCTTACATACATCATGATTGCTTTGCACCCATAGTCCATCGAGATATAACAAGCAACAACATTTTGCTTGATCTGGAATTCAGAGCTTGCATATCTGATTTTGGTATCGCCAAAATTCTAGATGTAGAGGCATCGAACTGCACAAAGCTTGCTGGGACAAAAGGTTATCTTGCTCCAGAGCTAGCATATACAACAAGGGTGACGGAGAAGTGCGATGTTTACAGCTTTGGAGTGCTCGTCTTTGAGCTGTTCATGGGGTGTCATCCTCCCCTTCCGACCGTTGCCGCCGCCGCCGCCGCCGGGATGCCACCTCGCCGCCGCCGCCGAGTCCGGCCGCCGCTCCCACCCTCCCCTCCCCTCCTCTCTTCCACCACCGCAACACCACCGCCAACCCCGCCCGTGGGCACCCCCAAATCCGAGGCCGCCGACCGCCGCCCTCCTCCCGCCCGCCGCCGCCTCCCCCTCGTCTCCGCCGCCGCCGTCGAGGAGGAGGACGGAGAGTGGCACCCCCTGCCGCTCTCCGCCGCCGACCTGTCCCTCCCGCTCACCCTCCCCACGGGGCAGACCTTCCTGTGGCGCCGCACGTCTCTCTCCCCGCTCCGCTTCACCGGCGCCGTGGGGCCTCACCTCGTCTCCCTCTCCCACCTCCCGTCCTCCGACGGCCGCCTCGCCTTCCTCCTCCACAACAACGGCGGCTCCTCCTCCTCCTCCGTCCCCGCGGCGGCCCGCGCCGCGCTCTCCGACTACCTCAACGCCGCCGTGCCGCTCGCCGACCTCTGGCGCCGGTTCGCCGCCGCGGACGCGCGGTTCGCGGAGGTCTCCGCGCGGCTCGGGGGCGGCGGCGCCCGGGTGCTCAGGCAGGACCCCGTCGAGTGCGTGTTCCAGTTCCTCTGCTCCTCCAACAACAACATCGCGCGGATCGAGAAGATGGTGTGGGCGCTGGCCGGCTACGGGGAGCGGCTCGGCGAGGTTGGAGGATACCAATTCCACCAATTCCCCACGATCGAGCGGCTCGCGCGCGTGTCGGAGCAAGAGCTCCGGGATGCCGGGTTCGGGTACAGGGCAAAGTACATCGTCGGCACTGCTAAAATATTACAGGCCAAGCCTGGTGGAGGCGAGAAATGGCTTGCCTCATTGCGTACAAGGGAACTCCCGGAGGTGATTGAGGCTCTTTGCACCCTTCCAGGTGTTGGGCCAAAAGTTGCAGCCTGTGTTGCTTTGTTCTCACTCGATCAGAACCATGCTATTCCTGTTGACACACATGTCTGGAAGGTTGCTACACAATATCTGATGCCGGAGCTAGCTGGCAAGAGCTTAACCCCAAAACTTAGTGTTGCTGTTGCCGATGCATTTGTTGCTAAATTTGGGAACTATGCTGGTTGGGCACAGAATGTTCTCTTTATTGGCCAGCTGTCTGCTCAAAAACTCATGGTTGCTGAAACTACAAACACTTCCACGAAACCTACTAAAAGGAAGCGTAGTGGAAACAATGTCAAAACATGA More
Protein seq	MVSLFNLSLANNLLHGNIPEELGSLQNLEYLDLSLNNLSGPIQGSIENCLKLQSLRLGHNHLGGSIPIKLGMLTYLQELLDLSDNSFAGIIPSQLSGLNMLEALNLSHNTLNGSIPPSFKGMISLSSMDVSYNNLEGPVPHIKFLEEAPVEWFVHNKHLCGTVKALPPCNLIQKGGKGKKFRPILLGVAAAAGISVLFITALVTWQRRKMKSVEQSENGAGNTKVFSVWNFDGGDVCKQSFEATENFNGTHCIGMGGNGSVYRAQLPTGEIFAVKKIHMTEDDELIFKREVDALMSIRHRNIVKLFGYCSAVHVKFLVYEYMDRGSLSRYLENHNTAIELDWMRRINIVKDVDNALSYIHHDCFAPIVHRDITSNNILLDLEFRACISDFGIAKILDVEASNCTKLAGTKGYLAPELAYTTRVTEKCDVYSFGVLVFELFMGCHPPLPTVAAAAAAGMPPRRRRRVRPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADRRPPPARRRLPLVSAAAVEEEDGEWHPLPLSAADLSLPLTLPTGQTFLWRRTSLSPLRFTGAVGPHLVSLSHLPSSDGRLAFLLHNNGGSSSSSVPAAARAALSDYLNAAVPLADLWRRFAAADARFAEVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWALAGYGERLGEVGGYQFHQFPTIERLARVSEQELRDAGFGYRAKYIVGTAKILQAKPGGGEKWLASLRTRELPEVIEALCTLPGVGPKVAACVALFSLDQNHAIPVDTHVWKVATQYLMPELAGKSLTPKLSVAVADAFVAKFGNYAGWAQNVLFIGQLSAQKLMVAETTNTSTKPTKRKRSGNNVKT More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.266141	0.624164	0.029557

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0552600	RBH	0.585477	0.855951	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g35080	SBH	0.125584	0.256607	0.728069
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0552600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0020930	SBH	0.224015	0.0	1.065708
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0021010	SBH	0.036886	0.207486	0.122091
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0020990	SBH	0.000000	0.323324	0.581727
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0020740	SBH	0.027518	0.028389	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0020640	SBH	1.418057	0.0	0.518677
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0344300	RBH	0.634974	1.5460675	1.0839395
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0020380	SBH	0.0	0.0	0.0
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_02G0369600	RBH	0.7525595	1.963957	1.8896305
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0020860	RBH	0.000000	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0020610	SBH	0.053822	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0021040	RBH	0.000000	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0024690	SBH	0.035031	0.082412	0.021348
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0020560	SBH	0.094109	0.146955	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G021010	SBH	0.045803	0.000000	0.179761
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0020740	SBH	0.000000	2.283685	0.000000

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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