Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g09200 | OGI:02014330 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:4724221-4726015 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTCATCTGCGAACATGTTTTTCTTAGATAATGGAAGGAACAATATTCCTTTATCTCAATGTTCCATAACATATTTGTGTGCGAAAAAACAACTACATACTAGGGTGTCGTCGCATGGAGTGGCACACGAACGACGGCATGTAGGTATAGGTCATTCTTCCTCCTAACAGTGATGCCCATCTCCTCGGTCATATCTAGCTCACTTGGCTTCACCCCAGCAGGGAGGCTCCAATCGAAGTGGTAGAGAAGGGTGGCGAGCGCGAGTTCTATGTTCGGCTGCGCGAACATTATACCAGGACACATTCTCCGTCCAGACCCAAATGGCAAGAACTCAAAGTCCAAACCCTTAAAGTCAATCTTGCTATCCTCAAATCGCTCAGGCTTGAACTCTTCGGGGTCATCCCAATACTTAGGATCTCTACCAATTGCCCAAGCGTTAACAAGCACAGTGGTACCTTTTGGCACATCATATCCAAAGATCTTGCATGACTCCCTCGACTCCCTAGGAAGGAGCAAAGGCGCTGGCAGATGCAACCTCAGCGTCTCTTTGATAATGAGCTTTAGGTAATTTAGGTCGGTCAAGTCTTCCTCGGTCACCTTTGGCTTCCCTTGGAGATTGTCGCGTAACTCAGCTTGCGCTCTCTTCATCACTCTTGGGTTCCTCATGAGCTCCGACATGGCCCATTGGATTGTAGTCGCTGATGTCTCACTTCCGGCGCTAAAAAGGTCCTATGAAATTTCAAAATTATTAACTTAAATTGAACATGCCAGAAATTAAATGAATTAGAACGTACGAAAAGGATTTGGAAAGAAAATTAGAAAAAAACATTTGGTTGGAATTTGGAAATGATGTTGTGCTTGCTTACAAGGATTACTGCTTTGATGATCCCCATGGTGAGAGGCACGTCGAGGCCACCTCCCTTCTGAATCCTCAAGAGGACGTCCACCAGATCGTCGTCTTCCACGACGTCGCCGCTCGCCGCCGCTGCCGCCGCGCGCCGCTCCTGGTGCTGCTCGATGGCGCGGTCCATGAGCTCGAAGTTCTTGCGGTGGTTCTCCTGCGCCCGCCGCGCCGCGCCGGTGACGAAGCTGGCGAGCCACGACGACGGGAACAGGTCGGCGAGGCTGAACCCGGAGACGAGCTTGAGCCCCTCGGCGAGGGCCTCCAAGAACTCGTCCCGCTTCTTGAACCTGTCCCCGATCATGGCGCGCACCGCCGAGTCGGCGATGAGCACGGCGATCCGCTCGCTGACGTTGACGGCCGCCTCGCCGTGGGGCGCCGCCGCCGCGACGGCGGCGGCGAGGCGCGCGGCCTCCTCCTCCCTGACGCGGCGGAACGACTGGACGCGGCGCGCGGAGAGGAGCTCCAGGATGGCGATGCGGCGGAGCTGTCGCCACAGCGCGCCGTAGGGCGCGAACACGAGGCCCTCCCCGTCGGCCGTCATGATCCTCACGGTGGGGCTCACCGGCCGCGTCGCGAACGCGACGTCGTGCGTCCGCATCACCTCGCGCGCGGCGCCCGGCGACGTGGCCACCACCACGGGGACCTCGCCGAGCCGGAGGTACATGAGCGGCGCGTCCATCCGCCGCGCGAGGTCCGCCAGCGCGCGGTGCACCAGCGGCTTCCCGGCGAGGTGGTGCAGGCTGCCGATCACCGGCAGCCGCCACGGCCCCGGCGGCAGCCTGACGCCATCGCTGCCGCCGCCGCGCGTCCTCGTGACCCGGACGAGCACCAGCACGGCCACGGCGAGGGCGAGGTAGTGGTAGTAACCGTAGCAGCTGGTTGGTTCTTCCAT
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| CDS seq | ATGGAAGAACCAACCAGCTGCTACGGTTACTACCACTACCTCGCCCTCGCCGTGGCCGTGCTGGTGCTCGTCCGGGTCACGAGGACGCGCGGCGGCGGCAGCGATGGCGTCAGGCTGCCGCCGGGGCCGTGGCGGCTGCCGGTGATCGGCAGCCTGCACCACCTCGCCGGGAAGCCGCTGGTGCACCGCGCGCTGGCGGACCTCGCGCGGCGGATGGACGCGCCGCTCATGTACCTCCGGCTCGGCGAGGTCCCCGTGGTGGTGGCCACGTCGCCGGGCGCCGCGCGCGAGGTGATGCGGACGCACGACGTCGCGTTCGCGACGCGGCCGGTGAGCCCCACCGTGAGGATCATGACGGCCGACGGGGAGGGCCTCGTGTTCGCGCCCTACGGCGCGCTGTGGCGACAGCTCCGCCGCATCGCCATCCTGGAGCTCCTCTCCGCGCGCCGCGTCCAGTCGTTCCGCCGCGTCAGGGAGGAGGAGGCCGCGCGCCTCGCCGCCGCCGTCGCGGCGGCGGCGCCCCACGGCGAGGCGGCCGTCAACGTCAGCGAGCGGATCGCCGTGCTCATCGCCGACTCGGCGGTGCGCGCCATGATCGGGGACAGGTTCAAGAAGCGGGACGAGTTCTTGGAGGCCCTCGCCGAGGGGCTCAAGCTCGTCTCCGGGTTCAGCCTCGCCGACCTGTTCCCGTCGTCGTGGCTCGCCAGCTTCGTCACCGGCGCGGCGCGGCGGGCGCAGGAGAACCACCGCAAGAACTTCGAGCTCATGGACCGCGCCATCGAGCAGCACCAGGAGCGGCGCGCGGCGGCAGCGGCGGCGAGCGGCGACGTCGTGGAAGACGACGATCTGGTGGACGTCCTCTTGAGGATTCAGAAGGGAGGTGGCCTCGACGTGCCTCTCACCATGGGGATCATCAAAGCAGTAATCCTTGACCTTTTTAGCGCCGGAAGTGAGACATCAGCGACTACAATCCAATGGGCCATGTCGGAGCTCATGAGGAACCCAAGAGTGATGAAGAGAGCGCAAGCTGAGTTACGCGACAATCTCCAAGGGAAGCCAAAGGTGACCGAGGAAGACTTGACCGACCTAAATTACCTAAAGCTCATTATCAAAGAGACGCTGAGGTTGCATCTGCCAGCGCCTTTGCTCCTTCCTAGGGAGTCGAGGGAGTCATGCAAGATCTTTGGATATGATGTGCCAAAAGGTACCACTGTGCTTGTTAACGCTTGGGCAATTGGTAGAGATCCTAAGTATTGGGATGACCCCGAAGAGTTCAAGCCTGAGCGATTTGAGGATAGCAAGATTGACTTTAAGGGTTTGGACTTTGAGTTCTTGCCATTTGGGTCTGGACGGAGAATGTGTCCTGGTATAATGTTCGCGCAGCCGAACATAGAACTCGCGCTCGCCACCCTTCTCTACCACTTCGATTGGAGCCTCCCTGCTGGGGTGAAGCCAAGTGAGCTAGATATGACCGAGGAGATGGGCATCACTGTTAGGAGGAAGAATGACCTATACCTACATGCCGTCGTTCGTGTGCCACTCCATGCGACGACACCCTAG
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| Protein seq | MEEPTSCYGYYHYLALAVAVLVLVRVTRTRGGGSDGVRLPPGPWRLPVIGSLHHLAGKPLVHRALADLARRMDAPLMYLRLGEVPVVVATSPGAAREVMRTHDVAFATRPVSPTVRIMTADGEGLVFAPYGALWRQLRRIAILELLSARRVQSFRRVREEEAARLAAAVAAAAPHGEAAVNVSERIAVLIADSAVRAMIGDRFKKRDEFLEALAEGLKLVSGFSLADLFPSSWLASFVTGAARRAQENHRKNFELMDRAIEQHQERRAAAAAASGDVVEDDDLVDVLLRIQKGGGLDVPLTMGIIKAVILDLFSAGSETSATTIQWAMSELMRNPRVMKRAQAELRDNLQGKPKVTEEDLTDLNYLKLIIKETLRLHLPAPLLLPRESRESCKIFGYDVPKGTTVLVNAWAIGRDPKYWDDPEEFKPERFEDSKIDFKGLDFEFLPFGSGRRMCPGIMFAQPNIELALATLLYHFDWSLPAGVKPSELDMTEEMGITVRRKNDLYLHAVVRVPLHATTP |
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| Function | Dolabradiene monooxygenase [UniProtKB/Swiss-Prot:A0A1D6GQ67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g09200 | LOC_Os02g09200.1 | Chr02 | 4724221 | 4726015 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAAGAACCAACCAGCTGCTACGGTTACTACCACTACCTCGCCCTCGCCGTGGCCGTGCTGGTGCTCGTCCGGGTCACGAGGACGCGCGGCGGCGGCAGCGATGGCGTCAGGCTGCCGCCGGGGCCGTGGCGGCTGCCGGTGATCGGCAGCCTGCACCACCTCGCCGGGAAGCCGCTGGTGCACCGCGCGCTGGCGGACCTCGCGCGGCGGATGGACGCGCCGCTCATGTACCTCCGGCTCGGCGAGGTCCCCGTGGTGGTGGCCACGTCGCCGGGCGCCGCGCGCGAGGTGATGCGGACGCACGACGTCGCGTTCGCGACGCGGCCGGTGAGCCCCACCGTGAGGATCATGACGGCCGACGGGGAGGGCCTCGTGTTCGCGCCCTACGGCGCGCTGTGGCGACAGCTCCGCCGCATCGCCATCCTGGAGCTCCTCTCCGCGCGCCGCGTCCAGTCGTTCCGCCGCGTCAGGGAGGAGGAGGCCGCGCGCCTCGCCGCCGCCGTCGCGGCGGCGGCGCCCCACGGCGAGGCGGCCGTCAACGTCAGCGAGCGGATCGCCGTGCTCATCGCCGACTCGGCGGTGCGCGCCATGATCGGGGACAGGTTCAAGAAGCGGGACGAGTTCTTGGAGGCCCTCGCCGAGGGGCTCAAGCTCGTCTCCGGGTTCAGCCTCGCCGACCTGTTCCCGTCGTCGTGGCTCGCCAGCTTCGTCACCGGCGCGGCGCGGCGGGCGCAGGAGAACCACCGCAAGAACTTCGAGCTCATGGACCGCGCCATCGAGCAGCACCAGGAGCGGCGCGCGGCGGCAGCGGCGGCGAGCGGCGACGTCGTGGAAGACGACGATCTGGTGGACGTCCTCTTGAGGATTCAGAAGGGAGGTGGCCTCGACGTGCCTCTCACCATGGGGATCATCAAAGCAGTAATCCTTGACCTTTTTAGCGCCGGAAGTGAGACATCAGCGACTACAATCCAATGGGCCATGTCGGAGCTCATGAGGAACCCAAGAGTGATGAAGAGAGCGCAAGCTGAGTTACGCGACAATCTCCAAGGGAAGCCAAAGGTGACCGAGGAAGACTTGACCGACCTAAATTACCTAAAGCTCATTATCAAAGAGACGCTGAGGTTGCATCTGCCAGCGCCTTTGCTCCTTCCTAGGGAGTCGAGGGAGTCATGCAAGATCTTTGGATATGATGTGCCAAAAGGTACCACTGTGCTTGTTAACGCTTGGGCAATTGGTAGAGATCCTAAGTATTGGGATGACCCCGAAGAGTTCAAGCCTGAGCGATTTGAGGATAGCAAGATTGACTTTAAGGGTTTGGACTTTGAGTTCTTGCCATTTGGGTCTGGACGGAGAATGTGTCCTGGTATAATGTTCGCGCAGCCGAACATAGAACTCGCGCTCGCCACCCTTCTCTACCACTTCGATTGGAGCCTCCCTGCTGGGGTGAAGCCAAGTGAGCTAGATATGACCGAGGAGATGGGCATCACTGTTAGGAGGAAGAATGACCTATACCTACATGCCGTCGTTCGTGTGCCACTCCATGCGACGACACCCTAG
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| Protein seq | MEEPTSCYGYYHYLALAVAVLVLVRVTRTRGGGSDGVRLPPGPWRLPVIGSLHHLAGKPLVHRALADLARRMDAPLMYLRLGEVPVVVATSPGAAREVMRTHDVAFATRPVSPTVRIMTADGEGLVFAPYGALWRQLRRIAILELLSARRVQSFRRVREEEAARLAAAVAAAAPHGEAAVNVSERIAVLIADSAVRAMIGDRFKKRDEFLEALAEGLKLVSGFSLADLFPSSWLASFVTGAARRAQENHRKNFELMDRAIEQHQERRAAAAAASGDVVEDDDLVDVLLRIQKGGGLDVPLTMGIIKAVILDLFSAGSETSATTIQWAMSELMRNPRVMKRAQAELRDNLQGKPKVTEEDLTDLNYLKLIIKETLRLHLPAPLLLPRESRESCKIFGYDVPKGTTVLVNAWAIGRDPKYWDDPEEFKPERFEDSKIDFKGLDFEFLPFGSGRRMCPGIMFAQPNIELALATLLYHFDWSLPAGVKPSELDMTEEMGITVRRKNDLYLHAVVRVPLHATTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.500655 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0184700 | RBH | 0.0 | 0.0 | 1.998509 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g43440 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0184700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006460 | RBH | 0.0 | 0.0 | 0.713681 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006600 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006390 | SBH | 0.0 | 0.0 | 0.993475 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006320 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006370 | RBH | 0.0 | 0.0 | 0.713410 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0080200 | RBH | 0.0234135 | 0.145528 | 0.088848 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006340 | RBH | 0.0 | 0.0 | 0.182965 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0082700 | RBH | 0.0159415 | 0.326833 | 0.05889 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006790 | SBH | 0.050209 | 1.296661 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006300 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006600 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006670 | SBH | 0.388017 | 0.148740 | 0.122075 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006350 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006530 | SBH | 0.038728 | 0.338339 | 0.781826 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006500 | RBH | 0.000000 | 1.786373 | 6.333513 |
