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© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved. National Key Laboratory of Crop Genetic Improvement Huazhong Agricultural University Any comments and suggestions, please contact us. |
Search Results: |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Loci | Gene Symbol(s) | Function | GO |
|---|---|---|---|---|---|---|
| OsMH63_03G0071200 | OGI:03011610 | 13/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:4351759-4354032 | ERF64, OsERF#064, OsERF064, OsERF64, AP2/EREBP#029, AP2/EREBP29, OsBIERF4, BIERF4 | Ethylene-responsive transcription factor 1 [UniProtKB/Swiss-Prot: Q6K7E6]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006952 (defense response)GO:0005634 (nucleus)
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| OsMH63_03G0076300 | OGI:03012340 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:4632126-4634667 | BHLH44, OsbHLH044, bHLH044, bHLH44, OsbHLH96, bHLH96, bHLH096 | Transcription factor bHLH96 [UniProtKB/Swiss-Prot: Q9C7T4]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_03G0111200 | OGI:03017700 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:6760389-6772334 | - | DNA polymerase I [UniProtKB/Swiss-Prot: Q04957]
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GO:0008408 (3'-5' exonuclease activity)GO:0003677 (DNA binding)GO:0003887 (DNA-directed DNA polymerase activity)GO:0006281 (DNA repair)GO:0006261 (DNA-dependent DNA replication)
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| OsMH63_03G0031100 | OGI:03005430 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:2027730-2029781 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_03G0040200 | OGI:03006820 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:2589996-2591608 | OsWD40-62 | Zinc finger CCCH domain-containing protein 48 [UniProtKB/Swiss-Prot: Q9FNZ2]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0030515 (snoRNA binding)GO:0032040 (small-subunit processome)
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| OsMH63_02G0379100 | OGI:02066040 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:24553500-24555578 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_02G0416100 | OGI:02072570 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:26937524-26939406 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_02G0431500 | OGI:02075060 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:27893281-27894870 | ERF32, OsERF#032, OsERF032, OsERF32, AP2/EREBP#021, AP2/EREBP21, CR223, OsDREB4-1 | Ethylene-responsive transcription factor ERF034 [UniProtKB/Swiss-Prot: Q8LBQ7]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_02G0431900 | OGI:02075160 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:27919851-27920528 | ERF35, OsERF#035, OsERF035, OsERF35, AP2/EREBP#148, AP2/EREBP148, OsAP211, ARAG1, OsARAG1 | Ethylene-responsive transcription factor ERF034 [UniProtKB/Swiss-Prot: Q8LBQ7]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_02G0443700 | OGI:02077330 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:28687941-28690783 | KAN1, OsKAN1, OsKAN2, KAN2, OsKANADI2, OsKANADI1 | Putative Myb family transcription factor At1g14600 [UniProtKB/Swiss-Prot: Q700D9]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_02G0249500 | OGI:02043690 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:16130338-16133151 | - | Histone H3.3 [UniProtKB/Swiss-Prot: Q71H73]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_02G0530600 | OGI:02091650 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:33770061-33775082 | - | Zinc finger CCCH domain-containing protein 43 [UniProtKB/Swiss-Prot: Q5Z5Q3]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0003729 (mRNA binding)GO:0003743 (translation initiation factor activity)GO:0016281 (eukaryotic translation initiation factor 4F complex)
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| OsMH63_02G0468900 | OGI:02081280 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:30143068-30146971 | DLN66, OsDLN66 | Myb family transcription factor PHL11 [UniProtKB/Swiss-Prot: C0SVS4]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_02G0475300 | OGI:02082430 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:30523329-30526670 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_02G0480200 | OGI:02083210 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:30868739-30869726 | - | Ethylene-responsive transcription factor ERF008 [UniProtKB/Swiss-Prot: O22174]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_02G0493600 | OGI:02085380 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:31581010-31581861 | DOF4, OsDof4, OsDof8, Dof8, OsDof-8, DOF8 | Dof zinc finger protein 4 [UniProtKB/Swiss-Prot: Q6Z345]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_03G0503100 | OGI:03082310 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:32412313-32418524 | OsCHB706, CHB706 | SWI/SNF complex subunit SWI3D [UniProtKB/Swiss-Prot: Q8VY05]
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GO:0003677 (DNA binding)GO:0008270 (zinc ion binding)GO:0006325 (chromatin organization)GO:0007275 (multicellular organism development)GO:0005634 (nucleus)
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| OsMH63_03G0520000 | OGI:03085190 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:33561696-33563861 | OsbHLH148, bHLH148 | Transcription factor BHLH148 [UniProtKB/Swiss-Prot: Q75KV9]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0009414 (response to water deprivation)GO:0005634 (nucleus)
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| OsMH63_03G0579800 | OGI:03094980 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:37171790-37174655 | NAC71, ONAC071, ONAC71 | NAC domain-containing protein 14 [UniProtKB/Swiss-Prot: B5X570]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0016021 (integral component of membrane)GO:0005634 (nucleus)
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| OsMH63_04G0008300 | OGI:04001480 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:645311-651984 | OsCHB704, CHB704 | SWI/SNF complex subunit SWI3D [UniProtKB/Swiss-Prot: Q8VY05]
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GO:0003677 (DNA binding)GO:0008270 (zinc ion binding)GO:0006325 (chromatin organization)GO:0007275 (multicellular organism development)GO:0005634 (nucleus)
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| OsMH63_04G0030000 | OGI:04005640 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:1893100-1897165 | - | Werner Syndrome-like exonuclease [UniProtKB/Swiss-Prot: Q84LH3]
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GO:0008408 (3'-5' exonuclease activity)GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0005634 (nucleus)
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| OsMH63_04G0263800 | OGI:04053050 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:17260818-17268127 | PRD1, OsSTA121, STA121, OsPRD1, - | Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1 [UniProtKB/Swiss-Prot: O23277]
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GO:0003677 (DNA binding)GO:0016787 (hydrolase activity)GO:0042138 (meiotic DNA double-strand break formation)GO:0005634 (nucleus)
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| OsMH63_04G0298100 | OGI:04059470 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:20290143-20292400 | FIT, OsbHLH156, OsFIT/OsbHLH156, OsFIT, bHLH156, OsIROP1, IROP1 | Transcription factor BHLH156 [UniProtKB/Swiss-Prot: A0A0N7KIY3]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_04G0308100 | OGI:04061520 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:20989315-20995980 | C3H27, OsC3H27 | Zinc finger CCCH domain-containing protein 27 [UniProtKB/Swiss-Prot: Q0JDM0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0003729 (mRNA binding)GO:0046833 (positive regulation of RNA export from nucleus)GO:0005634 (nucleus)
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| OsMH63_04G0335600 | OGI:04065860 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:22966555-22968765 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_04G0343200 | OGI:04067300 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:23600406-23606196 | ARF9, OsARF9 | Auxin response factor 9 [UniProtKB/Swiss-Prot: Q0JCZ4]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_03G0382500 | OGI:03062480 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:24456300-24457285 | BSRD1, ZFP36, OsZFP36, OsBSRD1, Bsr-d1, BSR-D1, DLN91, OsDLN91 | Zinc finger protein 36 [UniProtKB/Swiss-Prot: Q75KE5]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0006979 (response to oxidative stress)GO:0009414 (response to water deprivation)
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| OsMH63_03G0345500 | OGI:03056590 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:22387201-22390384 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_03G0259700 | OGI:03042220 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:16453380-16456842 | - | Histone H3.3 [UniProtKB/Swiss-Prot: Q71H73]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_02G0035600 | OGI:02007010 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:2108146-2112954 | LCRN1, OsSPL3, SPL3 | Squamosa promoter-binding-like protein 3 [UniProtKB/Swiss-Prot: A3A2Z8]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_01G0595700 | OGI:01107620 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:37853213-37854162 | - | Histone H2B.11 [UniProtKB/Swiss-Prot: Q943L2]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0006334 (nucleosome assembly)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_01G0607400 | OGI:01109480 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:38633356-38634655 | QHB, OsWOX9, WOX9, WOX5, Os WOX5, OsWOX5, QHB/OsWOX9, OsQHB | WUSCHEL-related homeobox 9 [UniProtKB/Swiss-Prot: Q8W0F1]
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GO:0003677 (DNA binding)GO:0007275 (multicellular organism development)GO:0005634 (nucleus)
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| OsMH63_01G0623900 | OGI:01112510 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:39711277-39715183 | - | 5'-3' exonuclease [UniProtKB/Swiss-Prot: O67550]
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GO:0017108 (5'-flap endonuclease activity)GO:0003677 (DNA binding)GO:0004527 (exonuclease activity)GO:0033567 (DNA replication, Okazaki fragment processing)
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| OsMH63_01G0658400 | OGI:01118120 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:41735823-41738978 | OsbHLH090 | Transcription factor bHLH62 [UniProtKB/Swiss-Prot: Q9SRT2]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_01G0660200 | OGI:01118370 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:41843995-41848951 | C3H12, OsC3H12 | Zinc finger CCCH domain-containing protein 12 [UniProtKB/Swiss-Prot: Q5JLB5]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0003729 (mRNA binding)GO:0005634 (nucleus)
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| OsMH63_01G0514500 | OGI:01093580 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:32853053-32855326 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_01G0524100 | OGI:01095270 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:33421321-33421959 | ERF54, OsERF#054, OsERF054, OsERF54, AP2/EREBP#162, AP2/EREBP162, ERF92, OsERF#092, OsERF092, OsERF92, ERF922, OsERF922, AP2/EREBP#078, AP2/EREBP78
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Pathogenesis-related genes transcriptional activator PTI5 [UniProtKB/Swiss-Prot: O04681]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006952 (defense response)GO:0005634 (nucleus)
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| OsMH63_01G0112600 | OGI:01021610 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:6998015-7000892 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_01G0123500 | OGI:01023640 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:7714539-7719741 | ARF16, OsARF16, OsARF2, OsARF1 | Auxin response factor 1 [UniProtKB/Swiss-Prot: Q5NB85]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_01G0139300 | OGI:01026350 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:8577967-8583980 | OsRPA14, RPA14, RPA3, - | Replication protein A 14 kDa subunit [UniProtKB/Swiss-Prot: Q9SDK9]
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GO:0003677 (DNA binding)GO:0006310 (DNA recombination)GO:0006281 (DNA repair)GO:0006260 (DNA replication)GO:0005634 (nucleus)
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| OsMH63_01G0143000 | OGI:01021610 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:8737741-8740168 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_01G0145000 | OGI:01027180 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:8842167-8847633 | C3H6, OsC3H6 | Zinc finger CCCH domain-containing protein 6 [UniProtKB/Swiss-Prot: Q5NAW2]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0003729 (mRNA binding)GO:0005634 (nucleus)
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| OsMH63_01G0367600 | OGI:01068300 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:23383752-23385654 | BHLH117, OsbHLH117, bHLH117, OsbHLH118 | Transcription factor bHLH87 [UniProtKB/Swiss-Prot: Q8S3D2]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_01G0372200 | OGI:01069010 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:23711043-23715242 | IDD11, OsIDD11 | Protein indeterminate-domain 7 [UniProtKB/Swiss-Prot: Q8H1F5]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046872 (metal ion binding)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_01G0421100 | OGI:01077420 | 12/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:27000419-27002804 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_07G0427600 | OGI:07072200 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:27194999-27197729 | BHLH1, OsbHLH1, bHLH1, OsbHLH062, bHLH062, bHLH62 | Transcription factor BHLH062 [UniProtKB/Swiss-Prot: Q69V10]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_07G0427700 | OGI:07072230 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:27199794-27203205 | ORC6, OsORC6 | Origin of replication complex subunit 6 [UniProtKB/Swiss-Prot: A2YNY4]
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GO:0003677 (DNA binding)GO:0006260 (DNA replication)GO:0009555 (pollen development)GO:0005664 (nuclear origin of replication recognition complex)
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| OsMH63_10G0312200 | OGI:10058780 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:20988730-20990760 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_10G0348300 | OGI:10064390 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:23257720-23262261 | EF1, Ef1 (Ef2), Ef2, Ef1, Ehd1, Eh1(t)*, EF1, ef1, qEHD-10-1(t) (qEhd1), OsRR30, OsRR22 | Putative Myb family transcription factor At1g14600 [UniProtKB/Swiss-Prot: Q700D9]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_08G0398400 | OGI:08071850 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:26886910-26888701 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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