Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0382500 | OGI:03062480 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:24456300-24457285 | ||||||||
| Gene Symbol | BSRD1, ZFP36, OsZFP36, OsBSRD1, Bsr-d1, BSR-D1, DLN91, OsDLN91 | ||||||||||
| DNA seq | ATGACGGCCGCCCTGCAAGCGCTGCTCGACCCGACGGCGCTGTCCCTGGGCCTGCCCACGCTGGTGATCAACAAGGAGGAGTACCTCGCCATCTGCCTCACCGTGCTCGCCGGCACGCTGGCGGGGAAGGCCCTGGTGGGCAAGGCCGTCCTAGGGGCGTGCGGTCAGCGCGTCCGCACAGGGCCTCCAATTTCCAGGACCCCTTAGGTCCAAAACTTCAACACTAGTCTAACTAGTTCCGAAAATCTGTTATTTTTTCTTATCGTTGCGGTTTCGATTACGTCTTTGCTGGTTCGCACAGTTGCGCCGGTTCGCAATCTTGAATCGCCTCCCACTGTGGAACTCGCCAATTGCCAATCGCAACAAACGAGAGGAGTAAACGACGCCTTACCTCTCTCTCTCGTGCGGTCGTGCCGCCTAACGCCGTCGCCGCCTGACACCAGTCACGCCCCTGACCTAATTCTTTCCGGTAATTTCTAATCCGGTAATCTCTAATTTTGGATTATCATTTTAGGCCATACTAGATTGCTATGAAATATATTACGGAGTATAAATTATTTTCATATTATATCATCAATTAAGTTTTTATCCTTCAACTTTGCACAGGGCCACCCTGCTGGTGGGAGTGGGAGACAAGCAGGAGGTGCAGCCATGTAGGCCTGCCAGCTGTTGTCCCCGAGGTGGCGAGCGGCGGCGCGCATGGCGCCGCCGTGGACTGGAGGCCACCCTCCGCAACATTGTCCGCCGACCTCTTGCCTTCCTCTCTGCCTCCGGCTCGTGCGGCCCCGCCAATGCTGACATGCGCCACCTCATCGCTCGCCTCCTTGCCAAGGACCCCACCGCCCGTCTCGGCTCCCACGCGGCGCCACCGACGTGAAGTCCCACCCGCTCTTCAAGACCCTCAACCTCGCCCTCCTCCGTTCGTCACGCCCACCCGTTGTCCCGGGCGCTGGCGCCGCGCCGCTGCACTGGTCGCAGTCGTGTAA
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| CDS seq | ATGACGGCCGCCCTGCAAGCGCTGCTCGACCCGACGGCGCTGTCCCTGGGCCTGCCCACGCTGGTGATCAACAAGGAGGAGTACCTCGCCATCTGCCTCACCGTGCTCGCCGGCACGCTGGCGGGGAAGGCCCTGGTGGGCAAGGCCGTCCTAGGGGCGTGCGTTGCGCCGGTTCGCAATCTTGAATCGCCTCCCACTGTGGAACTCGCCAATTGCCAATCGCAACAAACGAGAGGAGTAAACGACGCCTTACCTCTCTCTCTCGTGCGGTCGTGCCGCCTAACGCCGTCGCCGCCTGACACCAGTCACGCCCCTGACCTAATTCTTTCCGGGCCACCCTGCTGGTGGGAGTGGGAGACAAGCAGGAGGTGCAGCCATGTAGGCCTGCCAGCTGTTGTCCCCGAGGTGGCGAGCGGCGGCGCGCATGGCGCCGCCGTGGACTGGAGGCCACCCTCCGCAACATTGTCCGCCGACCTCTTGCCTTCCTCTCTGCCTCCGGCTCGTGCGGCCCCGCCAATGCTGACATGCGCCACCTCATCGCTCGCCTCCTTGCCAAGGACCCCACCGCCCGTCTCGGCTCCCACGCGGCGCCACCGACGTGAAGTCCCACCCGCTCTTCAAGACCCTCAACCTCGCCCTCCTCCGTTCGTCACGCCCACCCGTTGTCCCGGGCGCTGGCGCCGCGCCGCTGCACTGGTCGCAGTCGTGTAA
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| Protein seq | MTAALQALLDPTALSLGLPTLVINKEEYLAICLTVLAGTLAGKALVGKAVLGACVAPVRNLESPPTVELANCQSQQTRGVNDALPLSLVRSCRLTPSPPDTSHAPDLILSGPPCWWEWETSRRCSHVGLPAVVPEVASGGAHGAAVDWRPPSATLSADLLPSSLPPARAAPPMLTCATSSLASLPRTPPPVSAPTRRHRREVPPALQDPQPRPPPFVTPTRCPGRWRRAAALVAVV |
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| Function | Zinc finger protein 36 [UniProtKB/Swiss-Prot:Q75KE5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0382500 | OsMH63_03T0382500.1 | Chr03 | 24456300 | 24457285 | + | maker | ||
| CDS seq | ATGACGGCCGCCCTGCAAGCGCTGCTCGACCCGACGGCGCTGTCCCTGGGCCTGCCCACGCTGGTGATCAACAAGGAGGAGTACCTCGCCATCTGCCTCACCGTGCTCGCCGGCACGCTGGCGGGGAAGGCCCTGGTGGGCAAGGCCGTCCTAGGGGCGTGCGTTGCGCCGGTTCGCAATCTTGAATCGCCTCCCACTGTGGAACTCGCCAATTGCCAATCGCAACAAACGAGAGGAGTAAACGACGCCTTACCTCTCTCTCTCGTGCGGTCGTGCCGCCTAACGCCGTCGCCGCCTGACACCAGTCACGCCCCTGACCTAATTCTTTCCGGGCCACCCTGCTGGTGGGAGTGGGAGACAAGCAGGAGGTGCAGCCATGTAGGCCTGCCAGCTGTTGTCCCCGAGGTGGCGAGCGGCGGCGCGCATGGCGCCGCCGTGGACTGGAGGCCACCCTCCGCAACATTGTCCGCCGACCTCTTGCCTTCCTCTCTGCCTCCGGCTCGTGCGGCCCCGCCAATGCTGACATGCGCCACCTCATCGCTCGCCTCCTTGCCAAGGACCCCACCGCCCGTCTCGGCTCCCACGCGGCGCCACCGACGTGAAGTCCCACCCGCTCTTCAAGACCCTCAACCTCGCCCTCCTCCGTTCGTCACGCCCACCCGTTGTCCCGGGCGCTGGCGCCGCGCCGCTGCACTGGTCGCAGTCGTGTAA
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| Protein seq | MTAALQALLDPTALSLGLPTLVINKEEYLAICLTVLAGTLAGKALVGKAVLGACVAPVRNLESPPTVELANCQSQQTRGVNDALPLSLVRSCRLTPSPPDTSHAPDLILSGPPCWWEWETSRRCSHVGLPAVVPEVASGGAHGAAVDWRPPSATLSADLLPSSLPPARAAPPMLTCATSSLASLPRTPPPVSAPTRRHRREVPPALQDPQPRPPPFVTPTRCPGRWRRAAALVAVV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.025222 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g39620 | RBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0025160 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0024950 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0025020 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0025030 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0382500 | RBH | 0.0096435 | 0 | 0.033524 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024820 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0024930 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024700 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G024670 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0024630 | RBH | 0.0 | 0.0 | 0.0 |
