Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0343200 | OGI:04067300 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:23600406-23606196 | ||||||||
| Gene Symbol | ARF9, OsARF9 | ||||||||||
| DNA seq | GCGCGACGCGAAGCGAAGCGCACAAACCAACCAACCAGCCGGGCTGGGCATACTGCGACTCTGCGAGCATCCACCGCGACCCGTCTCTCTCTCTCTCCCACCTCCACTGGGCGCGGCCTGCCTTGCCTCCTGTGCCTCGTGCAGCTCCCCTCCTGCGACCGCGACCGCGACCGCCGCTCGCTGTCCAAAAGCCTCAAAGCCCAAGAGACCAGGGCGGCTACCTCCTCCTCCTACCACCACCGCCACCACTAGTCCCCCCCCCTCCCCCTGCAGCCAAAGCCTGCGACCATCCGCAACCTCAACCTCAACCTCACGCAGCTCCCGCGCCAACCGCGACCTCCCGGATCCGGCCACGCCGCCCTTCTCCGGCGAGATCCACCTGCGGGAATTCCGTGGTTGTTGGAGGCGCCGCGGCCGTTACAGGGCGGGGTGCGGTTAGATCCATGGAGATATGGAGATGGAGCTGAGCTGAGCTAGCAGCGGTAGTACAGATCGTGGCTCGCGCGTGGCGTCCCTGTCCGTTGGTTCCCGGCGGGTGGTGCTTTTGGGAGGAGTCGAGGAGGAGGAGGAGGAGGCATGGCCGCCGCGATGGAGATGGCGGCGAATCCAGGTGGTTCAGGTTCGAGTTCGTGCCTCTCCCACCCATCGCCGCATTTCCCGGTGGAGTTTTTTCTTGCCCCCCTTTTTTCCGGTAGCCGCCGGGCTGTGGCCTGGTTGAAATTTTTGGCGGTGCTTTGGCGTGGAAAAGTTTGGTTCGTTTGAGACCGAGACAATAGTTGATTTGAGTGGACTTGAGTAGTTGACTGGCTTGTGTGTTGAAATTTCCCTTTAATTTTGAGCCGATGTCACCGAACCAAAACGAGAAAAATTAGGCAATCCGTTCCCTTCTTTTTTTGCTTGATGAGTAGTTGTTGTCACCCTTGCTGATATGGGTAAACTCTTTGTTCCCACGATTTATGATGTTTGTGTGATATTTTTTTTTGTTTATTTAGTTCCGTAATTCGATGCTTCTGAATTGTGATCCGTCAAATAGGAAAAGCCGATTGATGTTTTCGCTGCTAATTTTGTTCGATTGTTTCAGTTTAGTTTGTAGGTGATGCATTTTTTTTTGGCTAGTTTAGCTGATGAATTGGCGCTTCTCTGCTGATGATAAACTGTGTCGGTTTAGTGGATCTTTGTGCGCTTCAACTATGTTTAGGATTTCTCATAATTTATCAAACTTGTTTTCTCAATTCGTCTTTCTTGTTCTGATGACTCAATTTTGTTTTGCGATTCAATTGCTTCTGTGTAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGGTGCTCACCGATCGGCTTGATCTACGAGTTCTTCATGCCAAATCTCATCGATTAAACTTTTTTTTTACTTAGTTTACGTTTTTTTTTTTCACCTCAAAGGCTCAAACTGATCACGGTTTGTTCTATAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGTCAGTGTTTCTTTAATCTGTCTGGTGTAACCTCCCATGTGAGTGTGCTGGAAATCGCCAGTCCGGTTACTGTAGCTCGAAATATTATTCAATGCTTACCGGTTGAGTTCTGCAATGCAGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATGTGAGTATATTCTCTACCCCCCTGCCAATATGTAAGGGGGGATATATATTGCTTTTGCAATGCATGCTATATTGCTACTGTAGTATTTCTACTTTCTTATTGTAGCAGCCTTTAATGGTTATAAATCATGTCCTTTTGTCATTCACATTGATTGATTTGTTTGCTTGCATTTGCTTGTTCAGCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGTTAGTATTAAAAGCATATTATGTCTCCACAGGTTGTTAAGATTGTTATATCCAAGTGTCAAATATCTTCTTGAGTTCTCGTATGTAGCAGTACCAGTTTATGATATTATTGAATAGTGTGGTTGCTTTGCAGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGTTAGCTTGAATCTTATCATTCGGGTGTTCTGTTATGCTTTCAATAAAAGCAGGGCCAGCCATGTGTGGTCTAAAAAAAATCTCATCATTTGGCATGATTCTTCCAATCTTGTTGGCACTATGTTGTCCTTATTATTTTGGTGTAACACTTTATTTCTCAGCCACACATGCTCACCATTGTGTAGTAGCATGTGGAATATATAAGCTGTATATCACTTTCAGGATCGCAATCTCATATCTTTCCATTTTTTTTACAGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGTACACAATACTAAGCATGTAACTTGAAGGCATTAGGTGCACTTGCATCTATCTCATGACTCAATTTAGTTGCGGATGAATCTAGTCTACAGTTATTACTGGTTTCTTCCGCTAAATATCGTTGAATAACTTTCAGGGGCGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGGTTCAATAAATTCTCATTTTGGTTATGCCCTTTGTTCCTGGTTCTTTATTGTATTGAGTTATGGTGCAAATTTTAATAGTAATGGTTGGCGTTTAGACCTATATAAAACTGAATTACTGAAATATGGCATTATTGGAATATTGTTTACTCTGCTGAGTGTATGATCATTATAAAAATAAACTTATGTATGATGATTTACCCATCCAGTCATGCATTGTTTTTGATAAAGTGGAGTAATACTTGGGTTATCCTAATTAGCATTATGATGTGCAAGTTTACATTATCTTGCAGACTAAACTTAATGTACATCTATTATGTTCCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTACAATCTTGAGTTTCTTTCTGCATAATTATGCTAGCTTTACTCCTGTAGTTTACGGTGCATATCATAAACATTTCTGTTTCACAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTAATTCATATTTTAGTTTTGAATTTTGATGGTTAAATTGGAAGATACTTTTTTGAGATGTTTTTTGTCCACTTATGTCTTGGTCTCTTGGTTGGTCCAGATCTGATTCTGTCCTGTAATTATTCGTAGGTCCAATGGGATGAACCTTCGGCTATTGTCCGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGTAAGAATGAAGTCCTGAACACCTGTGACAATTATGGTTCTGATTCTTGATTACAAGGCTCAGGTCATAGTTGGTGCACATAAACTTTTATATAACTTACTCCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGTTCACATTCATATAGATGCTAATGAATTTATATATATAATAATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGCTAGAAAGTCTTATATTGTGAAACCGAGGAAGTAGTGTATTATCCAGCTTAACATTTCAATGCTGGTGCGACTTACATCAGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCAATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAATCAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTGAGAGTTTGTCACGTTATTTCCATTTTCAAGATGCTGAAGCATACAAAGAACTTAATTACTTTTCCTTGTGCAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGAGTAAGAATCTTTACCTCTTCACATTTGTATATTTGATGCAAGTTTTTGGCATCAAAATTCTAATCTGATGGTAATGCATGTTGTTGCAGTGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAACCATTGACTTTGCCCTAATTCTGATATGATCATTTGAGGAAATTCCAATGTTTCTTCATTACTGCTTCCTGTGCTGAAGACGCAACGCCCTTTTGTCTTGAATTGTGGTGGTATTTGAACTGCAAGTGCCAGGAAGTTCCCAAGACTGGCAAGACCGCCTGGAAGAGGCATTCTGGCAAATGCATGCCGTTCCAAATTGTTTTGTGTTTTGGTAGGAGCCTTGGCGTTCTTGTCTGGTGCCCAGATTTAGGTAAGAAGTCCTGAACACCAAGATTGATGACGCTTCGGCCCTCTCCCCGTTGCTTAGGAGTAAATAGGATTTGCATATGTATATATAGTATCATTAGGATTCCTGATTGCCTGCTATTGTGATTCCAAGTAATTTGGATGCATTAATGCAATTATTATTCAGTAATTGTTATTTTTAGCAACAAACCTGTGAGTGATGGTGGTGGATGTGTTGATCTTGCAGCATTTGCTACCTCTCTCCATTGTGGAAGCCATCTGTACATAAACAAACTACTATCAAATAAGTAATGTTGTGCTTTCTAACCATCCATTG
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| CDS seq | ATGGCCGCCGCGATGGAGATGGCGGCGAATCCAGGTGGTTCAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGGGCGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTCCAATGGGATGAACCTTCGGCTATTGTCCGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCAATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAATCAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGATGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA
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| Protein seq | MAAAMEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKSRVERKQEPTTMGCRLFGIEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASVTNRDC |
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| Function | Auxin response factor 9 [UniProtKB/Swiss-Prot:Q0JCZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0343200 | OsMH63_04T0343200-mRNA-1 | Chr04 | 23600530 | 23606196 | + | maker | ||
| CDS seq | ATGGCCGCCGCGATGGAGATGGCGGCGAATCCAGGTGGTTCAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGGGCGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTCCAATGGGATGAACCTTCGGCTATTGTCCGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCAATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAATCAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGATGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA
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| Protein seq | MAAAMEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKSRVERKQEPTTMGCRLFGIEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASVTNRDC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0343200 | OsMH63_04T0343200-mRNA-2 | Chr04 | 23600530 | 23606196 | + | maker | ||
| CDS seq | ATGGCCGCCGCGATGGAGATGGCGGCGAATCCAGGTGGTTCAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGGGCGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTCCAATGGGATGAACCTTCGGCTATTGTCCGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGATGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA
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| Protein seq | MAAAMEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVAELPPSFDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASVTNRDC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0343200 | OsMH63_04T0343200-mRNA-3 | Chr04 | 23600406 | 23606193 | + | maker | ||
| CDS seq | ATGGCCGCCGCGATGGAGATGGCGGCGAATCCAGGTGGTTCAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGGGCGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTCCAATGGGATGAACCTTCGGCTATTGTCCGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCAATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAATCAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGATGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA
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| Protein seq | MAAAMEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKSRVERKQEPTTMGCRLFGIEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASVTNRDC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 9.6276555 | 33.723316 | 35.5044 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0442000 | RBH | 2.410429 | 2.206695 | 6.369086 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g36054 | RBH | 1.530079 | 1.393155 | 1.538967 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0442000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0014400 | RBH | 0.140060 | 10.381308 | 10.160145 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0015240 | RBH | 0.474745 | 5.262361 | 3.197213 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014990 | RBH | 1.460390 | 9.934835 | 10.182904 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014560 | RBH | 0.231587 | 0.760287 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014890 | RBH | 5.646452 | 36.372593 | 23.923052 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0019340 | SBH | 0.0 | 0.356206 | 0.201082 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0339100 | RBH | 13.8408255 | 17.3759375 | 32.0825555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0014350 | RBH | 0.287175 | 0.839113 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0014120 | RBH | 0.654696 | 14.467182 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0014090 | RBH | 5.302891 | 82.205330 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0014720 | RBH | 0.186283 | 1.947795 | 1.540608 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014930 | RBH | 0.231018 | 15.819616 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013960 | RBH | 0.290232 | 9.691360 | 10.700098 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0014000 | RBH | 0.780702 | 15.402971 | 11.404941 |
