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© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved. National Key Laboratory of Crop Genetic Improvement Huazhong Agricultural University Any comments and suggestions, please contact us. |
Search Results: |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Loci | Gene Symbol(s) | Function | GO |
|---|---|---|---|---|---|---|
| OsMH63_01G0260000 | OGI:01048300 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:16016585-16020591 | - | Asparagine--tRNA ligase, cytoplasmic 3 [UniProtKB/Swiss-Prot: Q9SSK1]
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GO:0004816 (asparagine-tRNA ligase activity)GO:0005524 (ATP binding)GO:0003677 (DNA binding)GO:0006421 (asparaginyl-tRNA aminoacylation)GO:0005829 (cytosol)
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| OsMH63_01G0374600 | OGI:01069670 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:24028812-24031392 | OsbHLH012, bHLH012, bHLH12, OsRb, Rb, Rb1, OsRb1, PSH1, Rb, Rb*, bhlh165, OsbHLH165, Rb2, OsPSH1, OsRb2
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Anthocyanin regulatory R-S protein [UniProtKB/Swiss-Prot: P13027]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_01G0447900 | OGI:01081830 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:28667439-28673141 | OSBZ8, OsBZ8, OsbZIP05, OsGBF1, GBF1, OsGBF1a, OsGBF1b | Common plant regulatory factor 1 [UniProtKB/Swiss-Prot: Q99089]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_01G0046100 | OGI:01008950 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:2735390-2735851 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59, H2B | Histone H2B.4 [UniProtKB/Swiss-Prot: Q94JJ4]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0006334 (nucleosome assembly)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_01G0326800 | OGI:01061490 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:20750578-20752758 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_01G0351100 | OGI:01065460 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:22317456-22319349 | - | Protein RKD4 [UniProtKB/Swiss-Prot: Q9LVU8]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009793 (embryo development ending in seed dormancy)GO:0005634 (nucleus)
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| OsMH63_01G0059400 | OGI:01012280 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:3340113-3345188 | DREB2A, OsDREB2A, OsDREB2a, ERF40, OsERF#040, OsERF040, OsERF40, AP2/EREBP#167, AP2/EREBP167 | Dehydration-responsive element-binding protein 2A [UniProtKB/Swiss-Prot: A2WL19]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_02G0555700 | OGI:02095680 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:35312454-35313553 | ERF79, OsERF#079, OsERF079, OsERF79, AP2/EREBP#017, AP2/EREBP17, ERF127, OsWR3, WR3, OsERF#127, OsERF127, AP2/EREBP#023, AP2/EREBP23, OsERF3, ERF3
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Ethylene-responsive transcription factor ERF003 [UniProtKB/Swiss-Prot: Q94AW5]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_02G0582800 | OGI:02100440 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:37077750-37081512 | C3H19, OsC3H19 | Zinc finger CCCH domain-containing protein 19 [UniProtKB/Swiss-Prot: Q6K977]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0003729 (mRNA binding)GO:0016973 (poly(A)+ mRNA export from nucleus)
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| OsMH63_02G0511600 | OGI:02088560 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:32632231-32634547 | - | Protein RKD1 [UniProtKB/Swiss-Prot: Q9M9U9]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0051302 (regulation of cell division)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_02G0543200 | OGI:02093740 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:34588227-34591452 | EREBP1, OsEREBP1, OsERF#070, OsERF070, OsERF70, ERF70, AP2/EREBP#084, AP2/EREBP84 | Ethylene-responsive transcription factor 1 [UniProtKB/Swiss-Prot: Q6K7E6]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006952 (defense response)GO:0005634 (nucleus)
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| OsMH63_02G0364800 | OGI:02063480 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:23612456-23614344 | NAC1, OsNAC1, ONAC027, ONAC27, NAC27, OMTN1, OsNAC1/ONAC027, DLN60, OsDLN60 | NAC domain-containing protein 100 [UniProtKB/Swiss-Prot: Q9FLJ2]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_03G0070800 | OGI:03011550 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:4329020-4331080 | ERF62, OsERF#062, OsERF062, OsERF62, AP2/EREBP#125, AP2/EREBP125, AP2-125, OsLG3, LG3, OsLG3/OsAP2-125, OsAP2-125, WAP1, OsWAP1, OsSTAP1, STAP1, ERF1, OsERF1, OsRAF
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Ethylene-responsive transcription factor 1 [UniProtKB/Swiss-Prot: Q6K7E6]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006952 (defense response)GO:0005634 (nucleus)
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| OsMH63_03G0147400 | OGI:03023500 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:8938958-8941956 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_02G0063100 | OGI:02011500 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:3675299-3677281 | - | Putative Myb family transcription factor At1g14600 [UniProtKB/Swiss-Prot: Q700D9]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_02G0069700 | OGI:02012510 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:4034300-4038444 | SPL4, OsSPL4 | Squamosa promoter-binding-like protein 4 [UniProtKB/Swiss-Prot: Q6H509]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_02G0098300 | OGI:02017140 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:5925781-5929383 | - | (6-4)DNA photolyase [UniProtKB/Swiss-Prot: Q0E2Y1]
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GO:0003914 (DNA (6-4) photolyase activity)GO:0003677 (DNA binding)GO:0000166 (nucleotide binding)GO:0006281 (DNA repair)GO:0009411 (response to UV)
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| OsMH63_02G0315100 | OGI:02055120 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:20347597-20350090 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_02G0344000 | OGI:02060050 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:22198009-22199676 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_03G0512400 | OGI:03084060 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:33183782-33187842 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_04G0264600 | OGI:04053170 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:17318827-17321538 | OsPRR12, Rra17, OsRRA17, OsEnS-61 | Two-component response regulator ORR29 [UniProtKB/Swiss-Prot: B8ASH8]
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GO:0003677 (DNA binding)GO:0009736 (cytokinin-activated signaling pathway)GO:0000160 (phosphorelay signal transduction system)GO:0005634 (nucleus)
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| OsMH63_04G0264700 | OGI:04045660 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:17331062-17349695 | RR29, OsRR29, Rrb7, OsPRR4, OsRRB7, OsPRR12, Rra17, OsRRA17, OsEnS-61, RR28, OsRR28, Rra22, OsPRR3, OsRRA22
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Two-component response regulator ORR28 [UniProtKB/Swiss-Prot: Q7XKS9]
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GO:0003677 (DNA binding)GO:0009736 (cytokinin-activated signaling pathway)GO:0000160 (phosphorelay signal transduction system)GO:0005634 (nucleus)
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| OsMH63_04G0305700 | OGI:04061130 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:20807848-20808308 | ARF10, OsARF10 | Auxin response factor 22 [UniProtKB/Swiss-Prot: Q9AV47]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_04G0328200 | OGI:04064650 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:22428605-22429852 | - | Histone H3.2 [UniProtKB/Swiss-Prot: Q76MV0]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_03G0597200 | OGI:03097840 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:38161397-38169136 | SPL6, OsSPL6, DLN106, DLN106a, DLN106b, OsDLN106, OsDLN106a, OsDLN106b | Squamosa promoter-binding-like protein 6 [UniProtKB/Swiss-Prot: Q75LH6]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_03G0458600 | OGI:03075180 | 10/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:29523818-29524825 | OsbHLH022 | Transcription factor bHLH25 [UniProtKB/Swiss-Prot: Q9T072]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_03G0271700 | OGI:03044350 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:17324270-17326126 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_03G0351300 | OGI:03057490 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:22731108-22734275 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_04G0147700 | OGI:04032060 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:9839737-9840873 | H1, OsH1 | Histone H1 [UniProtKB/Swiss-Prot: P40267]
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GO:0003677 (DNA binding)GO:0006334 (nucleosome assembly)GO:0042025 (host cell nucleus)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_04G0478400 | OGI:04089800 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:32141315-32146860 | DLN66, OsDLN66 | Myb family transcription factor PHL11 [UniProtKB/Swiss-Prot: C0SVS4]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_04G0527700 | OGI:04098380 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:35250087-35254459 | LG1, SPL8, OsSPL8, OsLG1 | Squamosa promoter-binding-like protein 8 [UniProtKB/Swiss-Prot: Q01KM7]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_04G0540400 | OGI:04100500 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:36014371-36018412 | C3H32, OsC3H32 | Zinc finger CCCH domain-containing protein 32 [UniProtKB/Swiss-Prot: Q0J952]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0003729 (mRNA binding)GO:0016973 (poly(A)+ mRNA export from nucleus)
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| OsMH63_04G0387200 | OGI:04075270 | 9/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:26467808-26472562 | BZIP36, OsbZIP36 | Probable transcription factor PosF21 [UniProtKB/Swiss-Prot: Q04088]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005737 (cytoplasm)GO:0005829 (cytosol)GO:0005634 (nucleus)
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| OsMH63_04G0427100 | OGI:04081190 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:28803455-28807534 | OsGT-2, GT-2, OsMSL22, MSL22, - | Trihelix transcription factor GT-2 [UniProtKB/Swiss-Prot: Q39117]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_04G0433800 | OGI:04082240 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:29236266-29237220 | ERF37, OsERF#037, OsERF037, OsERF37, AP2/EREBP#041, AP2/EREBP41 | Ethylene-responsive transcription factor ERF034 [UniProtKB/Swiss-Prot: Q8LBQ7]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_04G0438900 | OGI:04083310 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:29624760-29635728 | PA, OsbHLH015, OsbHLH15, bHLH15, OsGL3B, GL3B, OsMYC6, MYC6, OsPa, Pa, OsHLH2, HLH2 | Anthocyanin regulatory R-S protein [UniProtKB/Swiss-Prot: P13027]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_05G0446400 | OGI:05077420 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:29711075-29711533 | - | Histone H2B.9 [UniProtKB/Swiss-Prot: Q6F362]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0006334 (nucleosome assembly)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_05G0450800 | OGI:05078130 | 9/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:29934044-29936557 | - | Protein RADIALIS-like 6 [UniProtKB/Swiss-Prot: Q1A173]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_05G0001600 | OGI:05000350 | 6/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:159378-160385 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_05G0016000 | OGI:05002920 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:989262-990615 | GL1, gl1, NUDA/GL-1, NUDA/GL1, NUDA, GL-1, OsWOX3B, OsWOX2, OsWOX3, Os WOX3, WOX3B, WOX2, WOX3, LSY1, OsLSY1, DEP, OsDEP, GLR1
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Putative WUSCHEL-related homeobox 2 [UniProtKB/Swiss-Prot: Q5W7C3]
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GO:0003677 (DNA binding)GO:0007275 (multicellular organism development)GO:0005634 (nucleus)
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| OsMH63_06G0022500 | OGI:06003990 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:1296678-1297322 | DREB1C, OsDREB1C, CBF1, ERF26, OsERF026, OsERF#026, OsERF26, AP2/EREBP#098, AP2/EREBP98 | Dehydration-responsive element-binding protein 1C [UniProtKB/Swiss-Prot: Q9LWV3]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_05G0223700 | OGI:05039230 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:15467842-15470021 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_05G0330700 | OGI:05058180 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:22625359-22626282 | CENH3, CENH3, CenH3 | Histone H3.2 [UniProtKB/Swiss-Prot: Q76MV0]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_05G0363200 | OGI:05063770 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:24549180-24551057 | OsOFP15, OsOFP22 | Transcription repressor OFP4 [UniProtKB/Swiss-Prot: F4HNU8]
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GO:0003677 (DNA binding)GO:0045892 (negative regulation of transcription, DNA-templated)GO:2000652 (regulation of secondary cell wall biogenesis)GO:0005634 (nucleus)
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| OsMH63_05G0372900 | OGI:05065220 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:25147439-25150025 | CENH3, CENH3, CenH3 | Histone H3 [UniProtKB/Swiss-Prot: P90543]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_05G0128200 | OGI:05022780 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:8673142-8677382 | - | Zinc finger BED domain-containing protein RICESLEEPER 1 [UniProtKB/Swiss-Prot: B9FJG3]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_06G0414200 | OGI:06074520 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:27274990-27280193 | RR25, OsRR25, Rrb3, Orr5, OsRR21, OsRRB3 | Two-component response regulator ORR25 [UniProtKB/Swiss-Prot: Q67W50]
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GO:0003677 (DNA binding)GO:0009736 (cytokinin-activated signaling pathway)GO:0000160 (phosphorelay signal transduction system)GO:0005634 (nucleus)
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| OsMH63_06G0430100 | OGI:06077090 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:28244375-28248265 | SPL11, OsSPL11 | Squamosa promoter-binding-like protein 11 [UniProtKB/Swiss-Prot: Q653Z5]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_06G0435100 | OGI:06078020 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:28590811-28593451 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_06G0435400 | OGI:06078040 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:28605857-28612012 | MYB | Protein REVEILLE 6 [UniProtKB/Swiss-Prot: Q8H0W3]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0042752 (regulation of circadian rhythm)GO:0005634 (nucleus)
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