Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_05G0128200 OGI:05022780 | 3/16 Minghui 63 | MH63RS3 | HZAU Chr05:8673142-8677382
Gene Symbol -
DNA seq

TTATTCGAAACAAAAGCAATAGATCATTTCATATATTCAACACATGTACTTAGAATTTGAAACAATTTAGGATTAAAAATACACCGTGCTAGGACGTACTTACAGTTAATGCCTGCTGCTGCGGCTTCTTCACCTGTTGCCCGATGCTTTTGTCGACGGGCACGGCAAGCCGTCCGCAAACCACCACCGCATGCTACAAGCCTACAAAGGATGATAATTAAGGGAAGTACGAACATAAGGCACCAACTGATACACATTACGCAGCCAGCGCACACACTACATGCAATGTCAGGTACAACTCTGATGGCATACTACAGACAAAGCGTACATAACAACATGAAAGAGTTAACAGAGTTCAATACAACAAATTACACCCTAGGAGGATAAGCTCAGATCACAATCAGTTCATAATCCCTGCCTAAAATACGCATAAGATGCTGTTGCTTCACAAAAAGGGGGAATCACGGCGAGCCTATGCTGCATCCACCTTGACCAGCGCCGTACTCGGTGCCTCCGGGGTAGCTGGTAAATACTGAAGCCAGTCTTTGGCACAAACGAGCGCCTCCACAATTTCTGGACGCGATGAGCTTCTGTAGTCATCAAGCATGCGAGTTCCAGTTCCAGCAGAGAAAATAGAGTTGCCGCTGCTCACCATCGACATCGGAATGGCCAAGATATCCCGGGCCATCTTTGAGAGAGTAGGGTACTTGAGAGTGTTGAGCTTCCACCAGTTCAGAATGTCAAATTCCTGGATGCGCGGAGTGAGGGACTCATCCAGGTACTGTTCCAGTTCAGATTTTGTTGGCTGGCTTGTAGCTATCTCAGAAAGGTACATATCGAAGTCCACAAGTCCATCGCCGGTTGAAGGAGCAGTTGCTTGAGTACTATTCTCGCTAGCAGGTGCATTATTACCTCCCCCTTGCTCAACGTAAGCCGGCGTTAAGGGGAGGGGCTGTGCAACATACTCGTTGTAGAGCTCATGAACAGCATCATCCACCACCTTAACATATTTCGCAGCTTCAACACCATAAATTTTCGAGTAGCTGAACTCAACGAGCTTCATCTTGAAGCGCGGATCCATCACAACAGCAATAGCTAACACAAGGTTGCAATCTTTCCAGTACTTGTCAAATCTCTCGTGCATATCCTTGGCAATGCTGCTGAAAACAGGGTCTTCACGCCCTGTGGCATTTGACAGCTCGAGCTGAAGTTTCCATGCCTCATGGAAAAAGAGATTTGAAGTTGGATTTGCTGCAGCCATGATGCTATGTGCTGAGTCATACAATAGCTTCAAGTAATTGCAGGCAGCCTCAACTTTTTTCCAGTCCTCAGCGGACGGTGCCTCGTTGTAGTTATCATCACTTGTCTCTAGAGTAGAAAAGGCCTGCTTATAATCCAAGGCAGCCAGCAGCATGAGATAGGTAGTGTTCCACTGTGTCGTAACATCCAGACAAAGGGTCTTGGTACTTGGGATCTCTAGTTGCAGAGCAATCTCTGCAAACTTCTCCTCACAGCTAGGAGAAGCTTTTATGAACTTAATGCTTTCGCGGATATTATAGATGACACCATGAATTGAAGCAATGACATCCTGAGCAACTGCATTCAGGATATGGGCATAACACCTTACAACAAATAGTTGGCCCTTGAGCATGAGGTTGTTCTTGTTGGAGAGATAATCCCTCAGATTCGCACTGTATATATCATGTGATGAGCAATCATTGTCCAATGTGATGGTGAATAGTTTGTCCTTCATATTCCAGTCTGAAAGGCTTGTACTAATAGCTTCACTAAGTGCATTCTCTGAATGAGGAGAAGACACCATCATGAAGTTTAGCATTCTTCGATGCATCTTCCACTCAGAGTCAATAAACTGCCCAGCAAGTGAAACATAGCCAAGAGTTTGGCTAGTTGTCCACAATCCAATAGCGAGGCTGATCCTTCCAGGCATAGTGTTGAATGCTTGCATGAGGTTTTCCTTTTCTTTCTGGTAAACAGCATACACCTCCCACTCCATTGTCTCAACATCTACAACCCTGAAACGTGGCTGCAGACTGTCAATAAAGGTAGTGAAGGCTGGCTGTTGAACAATGTGAAGTGGATAGTCATGCAAAATGATCATCTTCGCCAGATATGAGCAACTGCGTTCTTGATCAAAAGCAGCATTTGCATAACCAGTATATCTGTAACGCCTCTTAGACGGGCGCTCCACAGTACCCTCACCATCATTGTCAGTCCCTCCAGCTGGAGTCAGTAATAGCTTGTGCTCTTGGTTCTTAATTTTAGGACATGAACCCAAGGTAATGTGCCTCTTGAGATGGCTAGTGCCCGCAATTTTTGAACCAGAGCTGTAAGCAAAAGTTTGCTTGCACAGTTTGCAGCACGCCCGTGTAGCCCCTCCAGAGACAGCTTCAATAGTGAAGTGCTCCCACACTAGAGACTTCTTCCTACGGCGCCTTGATGTTGGAGGGATACTCATCTCAGCACTGACCAATTCATTTCCTTGGACCTCGTCACCTTGAATTAAGTCCTCCGCAAGGACCAATTCATCACCCTGAACTTCCTCAGCTAGAGCTTCCCCATTGCTTGGAACAATCTCGTTGCCTTGAACCACCAGGTTGTCGTTGCTGGTTTCCTCAGCCATGCTTCTTGGCTAGTAGCTAGAACTCACAAAATCTATTAAATAGTAACATGGTAACAGCAGAAGTCAGTATAACAATCATTTGGCCAAAAAAAAATTATCGAAATTGACTTATACACGGTTGTTTCAATAACAAACCAGTGTCACTACAGTGGCCTATTTAACAAAACAGGAAGACAAAAGAAAGACAACACGATTTCTTGATAACAAATTAGCAAACCAGGTTATAGCAACTGGAGCACAGATGAAACAACAAAAATATAGATGTCATAGGAATATATGGAAACTTAGACTGGGAAACATCTCTTCTCACTCCTCAGTAAAAATGCTTAAAGTACACAATTTAAATTAAATTTTATTTGCCACCGAAAGTGCAAACTTCATGAGCAGATACATGTGCTACGTTGTTTCCACAGTTGAGATATATTGACCCAACCATTAACTTCACCTATCAAGTTCATAACCTGAGCACCACATGTGTTTAGCAGAACACAGTGGCTGCTGATAATGAATTGCAGTGGTTGAATAGCACTGATAATGATATCTCACTAATGAACTGCATTCCCCAACCAACCTGATGAATAAACTGAAACAAATCAAGACCAAATATGATAGGAATAGGTTCATGAGTGCTATAACCACACAGCACTATAAATCTTTTTTGAGTTTCTAGTTTCATGAAAACAAAAACATCTAGTCTAAGATGATGAAAAACAAAAAGTAAGGACAATAAATTTAAACCTATTTCCAACTTATTTTTCATACTTGAAATGCATCGCTTGGGTAATAAAACTTCGGATGGTTTCTTTATTTATAAACTTGTAAAAATTCCAGGCATGATTAAAATTAACTCTTCATTTATAAAAACATCTCATTGCAAGTTAAACACTGAACTAACAACTTAGAGTTCTATGATATATACCATTTCTGAGTTTTTCTTTTCTTTGATCAGACTTTTAAGATCTTAACTTAGCAACAGATGAACTAACATACGCTCTGAATAGTGAAAGAATCAAGAAAATCACTTTGCAGCGAACTTAACCATACAAGTTCTAACAGCAGGAGAAAAGATATCCATGTACATATATGGAACTAGACAAGACATTGATTGAAAAGTATATACAGTTAAAATGCAGTAGAAATCAAGCATCTCAAACAGAATGTATCAAGCCATTCCACCAAAGAACCCCAAAGAAGGCATGTATGGCATATCAACTGCTATGCTTCTGTCCACACACGAGAAGCGGGTGAGGAGAGGATCAAGGTGTACCTGGTGCCGTGGATCTGGGCTTGAAGAAGACTGTTTCGACTCTGTGCAGCACTGTACAGCGGGGATGAAGGGAGGAGGCGCCTGCACCGAGGATGGAAGGGAGGCGGCGCCGGCACTGGGAAGGAAGGGGATGCGGTGCCTTAGGGGAAGCAGGCGGATGCGGTGGGAGGCGCTGGCGCCGCCGCCGGTGCGCGACGAGAGGAGGCGCCGGCGCGCGACGAGACAACAAGGAGAGGCGGCGCGGGAGCCGCTCGAGAAGAGAAGACGGGAGGCGGCCCGGAGTGGTGGATTTCCACCGGTTAGGTTAGTGGATGGATTTCTCTAGGGTTTGGG

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CDS seq

ATGGCTGAGGAAACCAGCAACGACAACCTGGTGGTTCAAGGCAACGAGATTGTTCCAAGCAATGGGGAAGCTCTAGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTAATTCAAGGTGACGAGGTCCAAGGAAATGAATTGGTCAGTGCTGAGATGAGTATCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGCAAGCAAACTTTTGCTTACAGCTCTGGTTCAAAAATTGCGGGCACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCTAAAATTAAGAACCAAGAGCACAAGCTATTACTGACTCCAGCTGGAGGGACTGACAATGATGGTGAGGGTACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAATGCTGCTTTTGATCAAGAACGCAGTTGCTCATATCTGGCGAAGATGATCATTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGTGGGAGGTGTATGCTGTTTACCAGAAAGAAAAGGAAAACCTCATGCAAGCATTCAACACTATGCCTGGAAGGATCAGCCTCGCTATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGACTCTGAGTGGAAGATGCATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTACAAGCCTTTCAGACTGGAATATGAAGGACAAACTATTCACCATCACATTGGACAATGATTGCTCATCACATGATATATACAGTGCGAATCTGAGGGATTATCTCTCCAACAAGAACAACCTCATGCTCAAGGGCCAACTATTTGTTGTAAGGTGTTATGCCCATATCCTGAATGCAGTTGCTCAGGATGTCATTGCTTCAATTCATGGTGTCATCTATAATATCCGCGAAAGCATTAAGTTCATAAAAGCTTCTCCTAGCTGTGAGGAGAAGTTTGCAGAGATTGCTCTGCAACTAGAGATCCCAAGTACCAAGACCCTTTGTCTGGATGTTACGACACAGTGGAACACTACCTATCTCATGCTGCTGGCTGCCTTGGATTATAAGCAGGCCTTTTCTACTCTAGAGACAAGTGATGATAACTACAACGAGGCACCGTCCGCTGAGGACTGGAAAAAAGTTGAGGCTGCCTGCAATTACTTGAAGCTATTGTATGACTCAGCACATAGCATCATGGCTGCAGCAAATCCAACTTCAAATCTCTTTTTCCATGAGGCATGGAAACTTCAGCTCGAGCTGTCAAATGCCACAGGGCGTGAAGACCCTGTTTTCAGCAGCATTGCCAAGGATATGCACGAGAGATTTGACAAGTACTGGAAAGATTGCAACCTTGTGTTAGCTATTGCTGTTGTGATGGATCCGCGCTTCAAGATGAAGCTCGTTGAGTTCAGCTACTCGAAAATTTATGGTGTTGAAGCTGCGAAATATGTTAAGGTGGTGGATGATGCTGTTCATGAGCTCTACAACGAGTATGTTGCACAGCCCCTCCCCTTAACGCCGGCTTACGTTGAGCAAGGGGGAGGTAATAATGCACCTGCTAGCGAGAATAGTACTCAAGCAACTGCTCCTTCAACCGGCGATGGACTTGTGGACTTCGATATGTACCTTTCTGAGATAGCTACAAGCCAGCCAACAAAATCTGAACTGGAACAGTACCTGGATGAGTCCCTCACTCCGCGCATCCAGGAATTTGACATTCTGAACTGGTGGAAGCTCAACACTCTCAAGTACCCTACTCTCTCAAAGATGGCCCGGGATATCTTGGCCATTCCGATGTCGATGGTGAGCAGCGGCAACTCTATTTTCTCTGCTGGAACTGGAACTCGCATGCTTGATGACTACAGAAGCTCATCGCGTCCAGAAATTGTGGAGGCGCTCGTTTGTGCCAAAGACTGGCTTCAGTATTTACCAGCTACCCCGGAGGCACCGAGTACGGCGCTGGTCAAGGTGGATGCAGCATAG

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Protein seq

MAEETSNDNLVVQGNEIVPSNGEALAEEVQGDELVLAEDLIQGDEVQGNELVSAEMSIPPTSRRRRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKNQEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENLMQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSCEEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGREDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTGDGLVDFDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKDWLQYLPATPEAPSTALVKVDAA

Function Zinc finger BED domain-containing protein RICESLEEPER 1 [UniProtKB/Swiss-Prot:B9FJG3]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_05G0128200 OsMH63_05T0128200.1 Chr05 8673142 8677382 - maker
CDS seq

ATGGCTGAGGAAACCAGCAACGACAACCTGGTGGTTCAAGGCAACGAGATTGTTCCAAGCAATGGGGAAGCTCTAGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTAATTCAAGGTGACGAGGTCCAAGGAAATGAATTGGTCAGTGCTGAGATGAGTATCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGCAAGCAAACTTTTGCTTACAGCTCTGGTTCAAAAATTGCGGGCACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCTAAAATTAAGAACCAAGAGCACAAGCTATTACTGACTCCAGCTGGAGGGACTGACAATGATGGTGAGGGTACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAATGCTGCTTTTGATCAAGAACGCAGTTGCTCATATCTGGCGAAGATGATCATTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGTGGGAGGTGTATGCTGTTTACCAGAAAGAAAAGGAAAACCTCATGCAAGCATTCAACACTATGCCTGGAAGGATCAGCCTCGCTATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGACTCTGAGTGGAAGATGCATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTACAAGCCTTTCAGACTGGAATATGAAGGACAAACTATTCACCATCACATTGGACAATGATTGCTCATCACATGATATATACAGTGCGAATCTGAGGGATTATCTCTCCAACAAGAACAACCTCATGCTCAAGGGCCAACTATTTGTTGTAAGGTGTTATGCCCATATCCTGAATGCAGTTGCTCAGGATGTCATTGCTTCAATTCATGGTGTCATCTATAATATCCGCGAAAGCATTAAGTTCATAAAAGCTTCTCCTAGCTGTGAGGAGAAGTTTGCAGAGATTGCTCTGCAACTAGAGATCCCAAGTACCAAGACCCTTTGTCTGGATGTTACGACACAGTGGAACACTACCTATCTCATGCTGCTGGCTGCCTTGGATTATAAGCAGGCCTTTTCTACTCTAGAGACAAGTGATGATAACTACAACGAGGCACCGTCCGCTGAGGACTGGAAAAAAGTTGAGGCTGCCTGCAATTACTTGAAGCTATTGTATGACTCAGCACATAGCATCATGGCTGCAGCAAATCCAACTTCAAATCTCTTTTTCCATGAGGCATGGAAACTTCAGCTCGAGCTGTCAAATGCCACAGGGCGTGAAGACCCTGTTTTCAGCAGCATTGCCAAGGATATGCACGAGAGATTTGACAAGTACTGGAAAGATTGCAACCTTGTGTTAGCTATTGCTGTTGTGATGGATCCGCGCTTCAAGATGAAGCTCGTTGAGTTCAGCTACTCGAAAATTTATGGTGTTGAAGCTGCGAAATATGTTAAGGTGGTGGATGATGCTGTTCATGAGCTCTACAACGAGTATGTTGCACAGCCCCTCCCCTTAACGCCGGCTTACGTTGAGCAAGGGGGAGGTAATAATGCACCTGCTAGCGAGAATAGTACTCAAGCAACTGCTCCTTCAACCGGCGATGGACTTGTGGACTTCGATATGTACCTTTCTGAGATAGCTACAAGCCAGCCAACAAAATCTGAACTGGAACAGTACCTGGATGAGTCCCTCACTCCGCGCATCCAGGAATTTGACATTCTGAACTGGTGGAAGCTCAACACTCTCAAGTACCCTACTCTCTCAAAGATGGCCCGGGATATCTTGGCCATTCCGATGTCGATGGTGAGCAGCGGCAACTCTATTTTCTCTGCTGGAACTGGAACTCGCATGCTTGATGACTACAGAAGCTCATCGCGTCCAGAAATTGTGGAGGCGCTCGTTTGTGCCAAAGACTGGCTTCAGTATTTACCAGCTACCCCGGAGGCACCGAGTACGGCGCTGGTCAAGGTGGATGCAGCATAG

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Protein seq

MAEETSNDNLVVQGNEIVPSNGEALAEEVQGDELVLAEDLIQGDEVQGNELVSAEMSIPPTSRRRRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKNQEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENLMQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSCEEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGREDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTGDGLVDFDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKDWLQYLPATPEAPSTALVKVDAA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 4.739984 6.751898 6.3301755

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0223100 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g14940 RBH 0.354604 0.490534 0.224653
Nipponbare | IRGSP 1.0 | RAP-db Os05g0223100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0512100 SBH 10.659963 9.832671 20.1603985
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0127600 RBH 4.172153 4.1675955 17.5621085
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0008060 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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