Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0336100 | OGI:11010520 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:24073893-24075815 | ||||||||
| Gene Symbol | PEX1, OsPEX1 | ||||||||||
| DNA seq | ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTTCCCTTCGAGCAGTGACGACGACGGTGGTGGTGATGCTGCCGGCGACGAACTCGCGCTGCTCTCTTTCAAGTCATCCCTGCTATACCAGGGGGGCCAGTCGCTGGCATCTTGGAACACGTCCGGCCATGGCCAGCACTGCACATGGGTGGGTGTCGTGTGCGGCCGCCGGCACCCACACAGGGTGGTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAACCTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAGGAGCTCAGCCGTCTCAGCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGTGAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAATACACTGTCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACAGGTCTCACTGATCTTGCACTGGCTGAAAATACGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTATCTTTCCTTAGCTTAGCCTTTAACAATTTAAGTGGAGCGATCCCAGATCCTATTTGTAACATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACAAATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCATGGTCGTATCCCGGCATCGATAGGTAATGCTTCCAACATCTCAATATTTACCATTGGTTTAAACACTTTCAGCGGTGTTGTTCCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTAGAGCTTCCAGAAACTCTTTTGGAAGCTGAAGAAACAAATGATTGGAAATTCATGACGGCATTGACAAATTGCTCCAATCTTCAAGAAGTGGAACTGGGAGGTTGCAAATTTGGTGGAGTCCTCCCTGATTCTGTTTCCAATCTTTCCTCTTCGCTTGTATCTCTCTCCATTAGAGATAACAAAATTTCAGGGAGCTTACCTAGAGATATCGGTAATCTCGTTAATTTACAATATCTTTCTCTCGCTAACAACTCCTTGACAGGATCCCTTCCCTCTTCCTTCAGCAAGCTTAAAAATTTACGTCGTCTCACTGTAGATAACAACAAGTTAATTGGTTCTCTCCCATTGACTATCGGTAATCTTACACAACTAACTAATATGGAGGTCCAATTTAATGCCTTCGGTGGTACAATACCAAGCACACTTGGAAACCTGACCAAGCTGTTTCAAATAAATCTTGGCCACACTAACTTTATAGGGCAAATTCCCATTGAAATATTTAGCATTCCCGCACTCTCTGAAATTTTGGATGTGTCCCATAATAACTTGGAGGGATCAATACCAAAAGAAATAGGGAAGCTTAAAAATATTGTCGAATTCCATGCTGATTCGAACAAATTATCGGGTGAGATCCCTAGCACCATTGGTGAATGCCAACTTCTGCAGCATCTTTTCCTGCAAAACAATTTCTTAAATGGTAGCATCCCAATAGCTCTGACTCAGTTGAAAGGTCTGGACACACTTGATCTCTCAGGTAACAATTTGTCAGGTCAGATACCTATGTCCTTAGGGGACATGCCTCTTCTCCACTCGCTGACCCTTTCGTTCAACAGCTTCCACGGTGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTACATCCAAGGCAATGCCCATATTTGCGGTGGCATACCTGAACTACATCTTCCGACGTGTTCCTTAAAATCAAGAAAGAAAAAGAAACATCAAATTCTGCTACACTTGCCGTCTTTTCGTTACTCTACATGCTTCTAA
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| CDS seq | ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTTCCCTTCGAGCAGTGACGACGACGGTGGTGGTGATGCTGCCGGCGACGAACTCGCGCTGCTCTCTTTCAAGTCATCCCTGCTATACCAGGGGGGCCAGTCGCTGGCATCTTGGAACACGTCCGGCCATGGCCAGCACTGCACATGGGTGGGTGTCGTGTGCGGCCGCCGGCACCCACACAGGGTGGTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAACCTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAGGAGCTCAGCCGTCTCAGCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGTGAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAATACACTGTCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACAGGTCTCACTGATCTTGCACTGGCTGAAAATACGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTATCTTTCCTTAGCTTAGCCTTTAACAATTTAAGTGGAGCGATCCCAGATCCTATTTGTAACATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACAAATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCATGGTCGTATCCCGGCATCGATAGGTAATGCTTCCAACATCTCAATATTTACCATTGGTTTAAACACTTTCAGCGGTGTTGTTCCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTAGAGCTTCCAGAAACTCTTTTGGAAGCTGAAGAAACAAATGATTGGAAATTCATGACGGCATTGACAAATTGCTCCAATCTTCAAGAAGTGGAACTGGGAGGTTGCAAATTTGGTGGAGTCCTCCCTGATTCTGTTTCCAATCTTTCCTCTTCGCTTGTATCTCTCTCCATTAGAGATAACAAAATTTCAGGGAGCTTACCTAGAGATATCGGTAATCTCGTTAATTTACAATATCTTTCTCTCGCTAACAACTCCTTGACAGGATCCCTTCCCTCTTCCTTCAGCAAGCTTAAAAATTTACGTCGTCTCACTGTAGATAACAACAAGTTAATTGGTTCTCTCCCATTGACTATCGGTAATCTTACACAACTAACTAATATGGAGGTCCAATTTAATGCCTTCGGTGGTACAATACCAAGCACACTTGGAAACCTGACCAAGCTGTTTCAAATAAATCTTGGCCACACTAACTTTATAGGGCAAATTCCCATTGAAATATTTAGCATTCCCGCACTCTCTGAAATTTTGGATGTGTCCCATAATAACTTGGAGGGATCAATACCAAAAGAAATAGGGAAGCTTAAAAATATTGTCGAATTCCATGCTGATTCGAACAAATTATCGGGTGAGATCCCTAGCACCATTGGTGAATGCCAACTTCTGCAGCATCTTTTCCTGCAAAACAATTTCTTAAATGGTAGCATCCCAATAGCTCTGACTCAGTTGAAAGGTCTGGACACACTTGATCTCTCAGGTAACAATTTGTCAGGTCAGATACCTATGTCCTTAGGGGACATGCCTCTTCTCCACTCGCTGACCCTTTCGTTCAACAGCTTCCACGGTGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTACATCCAAGGCAATGCCCATATTTGCGGTGGCATACCTGAACTACATCTTCCGACGTGTTCCTTAAAATCAAGAAAGAAAAAGAAACATCAAATTCTGCTACACTTGCCGTCTTTTCGTTACTCTACATGCTTCTAA
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| Protein seq | MISLPLLLFVLFFSALLLFPSSSDDDGGGDAAGDELALLSFKSSLLYQGGQSLASWNTSGHGQHCTWVGVVCGRRHPHRVVKLRLRSSNLAGIISPSLGNLSFLRTLQLSDNHLSGKIPQELSRLSRLQQLVLNFNSLSGEIPAALGNLTSLSVLELTNNTLSGAIPSSLGKLTGLTDLALAENTLSGSIPSSFGQLRRLSFLSLAFNNLSGAIPDPICNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYNQFHGRIPASIGNASNISIFTIGLNTFSGVVPPEIGRMRNLQRLELPETLLEAEETNDWKFMTALTNCSNLQEVELGGCKFGGVLPDSVSNLSSSLVSLSIRDNKISGSLPRDIGNLVNLQYLSLANNSLTGSLPSSFSKLKNLRRLTVDNNKLIGSLPLTIGNLTQLTNMEVQFNAFGGTIPSTLGNLTKLFQINLGHTNFIGQIPIEIFSIPALSEILDVSHNNLEGSIPKEIGKLKNIVEFHADSNKLSGEIPSTIGECQLLQHLFLQNNFLNGSIPIALTQLKGLDTLDLSGNNLSGQIPMSLGDMPLLHSLTLSFNSFHGEVPTNGVFANASEIYIQGNAHICGGIPELHLPTCSLKSRKKKKHQILLHLPSFRYSTCF |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q2R2D5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0336100 | OsZS97_11T0336100.1 | Chr11 | 24073893 | 24075815 | + | makerRMon | ||
| CDS seq | ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTTCCCTTCGAGCAGTGACGACGACGGTGGTGGTGATGCTGCCGGCGACGAACTCGCGCTGCTCTCTTTCAAGTCATCCCTGCTATACCAGGGGGGCCAGTCGCTGGCATCTTGGAACACGTCCGGCCATGGCCAGCACTGCACATGGGTGGGTGTCGTGTGCGGCCGCCGGCACCCACACAGGGTGGTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAACCTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAGGAGCTCAGCCGTCTCAGCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGTGAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAATACACTGTCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACAGGTCTCACTGATCTTGCACTGGCTGAAAATACGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTATCTTTCCTTAGCTTAGCCTTTAACAATTTAAGTGGAGCGATCCCAGATCCTATTTGTAACATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACAAATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCATGGTCGTATCCCGGCATCGATAGGTAATGCTTCCAACATCTCAATATTTACCATTGGTTTAAACACTTTCAGCGGTGTTGTTCCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTAGAGCTTCCAGAAACTCTTTTGGAAGCTGAAGAAACAAATGATTGGAAATTCATGACGGCATTGACAAATTGCTCCAATCTTCAAGAAGTGGAACTGGGAGGTTGCAAATTTGGTGGAGTCCTCCCTGATTCTGTTTCCAATCTTTCCTCTTCGCTTGTATCTCTCTCCATTAGAGATAACAAAATTTCAGGGAGCTTACCTAGAGATATCGGTAATCTCGTTAATTTACAATATCTTTCTCTCGCTAACAACTCCTTGACAGGATCCCTTCCCTCTTCCTTCAGCAAGCTTAAAAATTTACGTCGTCTCACTGTAGATAACAACAAGTTAATTGGTTCTCTCCCATTGACTATCGGTAATCTTACACAACTAACTAATATGGAGGTCCAATTTAATGCCTTCGGTGGTACAATACCAAGCACACTTGGAAACCTGACCAAGCTGTTTCAAATAAATCTTGGCCACACTAACTTTATAGGGCAAATTCCCATTGAAATATTTAGCATTCCCGCACTCTCTGAAATTTTGGATGTGTCCCATAATAACTTGGAGGGATCAATACCAAAAGAAATAGGGAAGCTTAAAAATATTGTCGAATTCCATGCTGATTCGAACAAATTATCGGGTGAGATCCCTAGCACCATTGGTGAATGCCAACTTCTGCAGCATCTTTTCCTGCAAAACAATTTCTTAAATGGTAGCATCCCAATAGCTCTGACTCAGTTGAAAGGTCTGGACACACTTGATCTCTCAGGTAACAATTTGTCAGGTCAGATACCTATGTCCTTAGGGGACATGCCTCTTCTCCACTCGCTGACCCTTTCGTTCAACAGCTTCCACGGTGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTACATCCAAGGCAATGCCCATATTTGCGGTGGCATACCTGAACTACATCTTCCGACGTGTTCCTTAAAATCAAGAAAGAAAAAGAAACATCAAATTCTGCTACACTTGCCGTCTTTTCGTTACTCTACATGCTTCTAA
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| Protein seq | MISLPLLLFVLFFSALLLFPSSSDDDGGGDAAGDELALLSFKSSLLYQGGQSLASWNTSGHGQHCTWVGVVCGRRHPHRVVKLRLRSSNLAGIISPSLGNLSFLRTLQLSDNHLSGKIPQELSRLSRLQQLVLNFNSLSGEIPAALGNLTSLSVLELTNNTLSGAIPSSLGKLTGLTDLALAENTLSGSIPSSFGQLRRLSFLSLAFNNLSGAIPDPICNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYNQFHGRIPASIGNASNISIFTIGLNTFSGVVPPEIGRMRNLQRLELPETLLEAEETNDWKFMTALTNCSNLQEVELGGCKFGGVLPDSVSNLSSSLVSLSIRDNKISGSLPRDIGNLVNLQYLSLANNSLTGSLPSSFSKLKNLRRLTVDNNKLIGSLPLTIGNLTQLTNMEVQFNAFGGTIPSTLGNLTKLFQINLGHTNFIGQIPIEIFSIPALSEILDVSHNNLEGSIPKEIGKLKNIVEFHADSNKLSGEIPSTIGECQLLQHLFLQNNFLNGSIPIALTQLKGLDTLDLSGNNLSGQIPMSLGDMPLLHSLTLSFNSFHGEVPTNGVFANASEIYIQGNAHICGGIPELHLPTCSLKSRKKKKHQILLHLPSFRYSTCF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.248729 | 0.0105775 | 0.059124 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0559200 | SBH | 0.222809 | 0.083266 | 1.098986 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35500 | SBH | 0.150230 | 0.050907 | 0.277533 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0559200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017480 | SBH | 0.0 | 0.457086 | 0.469055 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017540 | RBH | 0.023507 | 0.0 | 0.379464 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017770 | RBH | 0.164332 | 9.540369 | 4.595458 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0017040 | RBH | 0.010284 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017320 | SBH | 0.0 | 0.0 | 0.145598 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0326000 | RBH | 0.0459945 | 0.00643 | 0.034376 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017810 | SBH | 0.0 | 0.000000 | 0.057733 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017660 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017680 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017200 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0017080 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017240 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016140 | SBH | 0.0 | 0.588280 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017620 | SBH | 0.000000 | 0.000000 | 0.000000 |
