Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G016140 | OGI:11010520 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:21394001-21394982 | ||||||||
| Gene Symbol | XA21, Xa21*, Xa21, OsXA21, RLCK354, OsRLCK354, EXS, OsEXS, RLCK356, OsRLCK356, MRKc, MRKc, RKc, TRKc | ||||||||||
| DNA seq | TTAGCTTCCAAAAGAGTTTCTGGAAGCTCTAGTCTCTGAAGATTTCTCATCCTTCCAATCTCCGGTGAACAACACCGCTGAAAGTGTTTAAACCAATGGTAAATATTGAGATGTTGGAAGCATTACCTATCGATGCCGGGATACGACCATGAAACTGGTTGTAATACATGTATACCTCCTGCAGACTAGGAAGATTACTGAATGCATTTGTAGGCAGTGTACCACTTAGCTTGTTGGATATGACTTCGAATATGGTGAGAGAGGAGATGTTCCAAATAGCATCTGGGATCGCTCCACTCAAATTGTTAAAGGCCAAGCTAAGGAAAGATAATCTGCGCAATTGGCCGAAAGATGATGGGATGGAACCAGACAGCATATTTTCAGCCAGTGCAAGATCAGTGAGGCTGGTGAGTTTGCCCAGAGATGAAGGGATTGCTCCGGATTGTGTATTGTTAGTCAGCTCAAGAACCGAGAGACTGGTTAGATTGCCCAAAGCAGCTGGAATCTCACCCGATAGGCTGTTGAAATTCAGTACCAGTTGCTGGAGCCTGCTGAGACGGCTGAGCTCCTGGGGTATCTTGCCGGACAGGTGGTTGTCGCTGAGTTGCAGCGTCCTGAGGAAGGATAGGTTGCCCAGCGACGGCGAGATGATCCCGGCCAGGTTGGAGGAGCGCAGCCGCAGCTTCACCACCCTGTGTGGGTGCCGGCGGCCGCACACAACACCCACCCATGTGCAGTGTTGGCCATGGCCGGACGTGTTCCAAGATGCCAGCGACTGCCCCCCCTGATATAGCAGGGATGACTTGAAAGAGAGCAGCGCGAGTTTGTCGCCGGCAGCATCACCACCATCGTCGTCGTCACTGCTCGAAGGGCAGAGCAGCAGCGCAGAGAAGAAGAGGACGAAGAGCAGTAATGGGAGTGATATCATCGTGCCGAGATGCAGAGAATATCGGTGCAAGCTAAGACAGCAAGAGCGAGAGAT
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| CDS seq | ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTGCCCTTCGAGCAGTGACGACGACGATGGTGGTGATGCTGCCGGCGACAAACTCGCGCTGCTCTCTTTCAAGTCATCCCTGCTATATCAGGGGGGGCAGTCGCTGGCATCTTGGAACACGTCCGGCCATGGCCAACACTGCACATGGGTGGGTGTTGTGTGCGGCCGCCGGCACCCACACAGGGTGGTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAACCTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAGGAGCTCAGCCGTCTCAGCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGTGAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAATACACAATCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACCAGCCTCACTGATCTTGCACTGGCTGAAAATATGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTATCTTTCCTTAGCTTGGCCTTTAACAATTTGAGTGGAGCGATCCCAGATGCTATTTGGAACATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACAAATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCATGGTCGTATCCCGGCATCGATAGCGGTGTTGTTCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTAGAGCTTCCAGAAACTCTTTTGGAAGCTAA
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| Protein seq | MISLPLLLFVLFFSALLLCPSSSDDDDGGDAAGDKLALLSFKSSLLYQGGQSLASWNTSGHGQHCTWVGVVCGRRHPHRVVKLRLRSSNLAGIISPSLGNLSFLRTLQLSDNHLSGKIPQELSRLSRLQQLVLNFNSLSGEIPAALGNLTSLSVLELTNNTQSGAIPSSLGKLTSLTDLALAENMLSGSIPSSFGQLRRLSFLSLAFNNLSGAIPDAIWNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYNQFHGRIPASIAVLFTGDWKDEKSSETRASRNSFGS |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q2R2D5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G016140 | OsN22_11G016140_01 | Chr11 | 21394001 | 21394982 | - | NAM | ||
| CDS seq | ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTGCCCTTCGAGCAGTGACGACGACGATGGTGGTGATGCTGCCGGCGACAAACTCGCGCTGCTCTCTTTCAAGTCATCCCTGCTATATCAGGGGGGGCAGTCGCTGGCATCTTGGAACACGTCCGGCCATGGCCAACACTGCACATGGGTGGGTGTTGTGTGCGGCCGCCGGCACCCACACAGGGTGGTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAACCTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAGGAGCTCAGCCGTCTCAGCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGTGAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAATACACAATCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACCAGCCTCACTGATCTTGCACTGGCTGAAAATATGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTATCTTTCCTTAGCTTGGCCTTTAACAATTTGAGTGGAGCGATCCCAGATGCTATTTGGAACATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACAAATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCATGGTCGTATCCCGGCATCGATAGCGGTGTTGTTCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTAGAGCTTCCAGAAACTCTTTTGGAAGCTAA
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| Protein seq | MISLPLLLFVLFFSALLLCPSSSDDDDGGDAAGDKLALLSFKSSLLYQGGQSLASWNTSGHGQHCTWVGVVCGRRHPHRVVKLRLRSSNLAGIISPSLGNLSFLRTLQLSDNHLSGKIPQELSRLSRLQQLVLNFNSLSGEIPAALGNLTSLSVLELTNNTQSGAIPSSLGKLTSLTDLALAENMLSGSIPSSFGQLRRLSFLSLAFNNLSGAIPDAIWNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYNQFHGRIPASIAVLFTGDWKDEKSSETRASRNSFGS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.588280 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0559200 | SBH | 0.222809 | 0.083266 | 1.098986 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35500 | RBH | 0.150230 | 0.050907 | 0.277533 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0559200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024590 | RBH | 0.0 | 5.368335 | 1.046873 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024560 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024060 | SBH | 0.000000 | 10.479267 | 4.550014 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0024050 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017320 | RBH | 0.0 | 0.0 | 0.145598 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0332200 | RBH | 0.009196 | 0.9433155 | 3.2579865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024800 | SBH | 0.009890 | 0.000000 | 0.012598 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0336100 | SBH | 0.248729 | 0.0105775 | 0.059124 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017660 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017680 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017200 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0017080 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017240 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016130 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0018010 | SBH | 0.080130 | 5.532844 | 0.000000 |
