Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0270200 | OGI:11048370 | 5/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:19307098-19311322 | ||||||||
| Gene Symbol | HWI1, 25L1 | ||||||||||
| DNA seq | ATGGCAAACTACTTGCCTGTGGCTCTAGCGGATTTTGCCCGGTCCTGGCTTCGTGGGTTACCCCGTGGCACAATCGGATCATGGGCGAAACTTCGCGACCACTTCATCGCCAACTTCCAGGGCACCTTTGAACGCCCTGGTACACATTTTGATCTCTACAATGTCATTCAGAAGTCTAGAGAATCCCTTCGAGATTACATCCGATGCTTTTCTGAGCAACGCAACAAGATCTTCGACATTACCGACGACGTCATCATCGCCGCCTTCACCAAGGGAATTCGTCACAAAGACCTAGTTGGCAAGTTCGGGCGCAAGCCTCCCAAGACGGTCAAGCAGATGTTTGAGAAAGCCAACGAGTATGCCAAAGCCGAAGATGCCATTATCGCGTACAAGCAGTCGGGCACCACGTGGAAGCCGAACAAAGATACGCCGACTACAGGGGGGAGTGGAAGTACCAATCATAAGGACCATAAGCGTAAGCCCGAGGAACTTGTGGCAACTACTACACCTTCCTCCCGACAACGTTCGCGCGTCAACACTTTCGACAAGATCATGAACTCCCAATGTCCGCATCAGCCCAATTCCAATCACGCGGCCAAAGATTGCTTCATCTACAAATAGTTTGCAGAACATGTCACGCCCAGAAATTCACTAGTAATTTCCGAACTTATTTGTGCATTAAATCCTCGTCCAGGAATCAGCCGAGGTACACAAACTGACAATTTAATATACAGATTCATCAATATAATAATGTTACATACTTACAAAAGAAAAGAAAACTGCAGTGGAATTACGGTCTAGCGAAGCTCCGGCTCCACTCCCACAGGCAGCTCAACTGGGGTATAAGCCAAACGTCTTTTCCTTCGCAACTTGTCTTCAACTGAGGTTTGATTGATTATTGCAAGGTGAGCATATGACATACTCAGCAAGCCACACAGCAAATATGCAAGTGCACAAGGATACCAAAGGATGGCATAATATAGGCTCATTTGCAAAAGCAGCATTTAGCAAACATTTAAGAGTAATAAAACAGTAGAGTACTTTAATCATTAATTTTAATCAACACTGAACAACACGCCCATGCTGCTCAGGCCCAACCATTCTGAACAACCATACCCAGCTGCACAGATCTATCTCCAAACTAGGAACATTCCATTCCAAACCAGGAGCTAATCAAATTATTACCAGTTATAGCATCATTTATTATGGTGAGAAGTGTGAGACTAATCACGAAAGACATTGTTAGACCCGTCCATGACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGGCCAGAGGTGTACCACTGTACCCACAAGACACAACCCACCAGCATGATACCGTGTCCGCATAGACACGTCACCATGTTGAGTGATTGTGACAAGACCCCTCGCATAACTCAACTCAAAGTAGTGCACCGTTCCCGGATCATAGTCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCTGTGGGCTTATCTCCGCCACTTCTCAGTCTGGTGCTCCGCAATGAGCCTTGTTATACAAAGTGTCCAGCTGTTGCCCATTCTGGCTTGTGGTTGGCACAGTTAATGTTTCACAACCGAAAATCGTGAGCACGACCATCAAAACCATGTACTCACAACCCACCATTATCAAGTTTTAGTTGGCCCATTAATTAATGAACCAATCACGATTGACCATCGTGAGCTATCATTAAATATCCATCATTAAGTAATAGTGAAACATTAGTTATCCCAATTGTGTGCTAATGTTTCTAAGCATGGCTAAGCAATTATGTCTAACATCTAGCTGAACCAATATATATAAAGCTCAACTAGTGAAATTATACTATCCCAAGGTATCAAGGAATAGAGTAATCAATGCAAACAGGCCATAACAAAGGAATAGATTCACACCACCCAGTGACATTCGAAAATAAATGCACAGTTGAAATAAATAGAGAATTTAAATATAGGATCAACATGCTCAAAGAAACTGTGTTTGGGATCTGTGTGACTTGCCTTGCAATAAAGGGTCTTCAATTAATCTTCTTAACACTTCCGGCGCACTCGCGAACCTTCGAATCGATGGAAACGACAAACTAACACGAAAAACGAGGAAAAAGACTAATAAAAACCAAATAAACAATACACAAAAAGTAAACAAACATGTAGATCATAATTTTAGATGAATTATGAGACTTGAACGGCCTCATTCGGACTTCATATGAATTTATTACGAATTTTACAAGATTAAATCTAATTAAAGCCTATTTAAAAAGGATTAAATAAATTTAATTCAATTTATGGATAATTTTAATATGTAGATCTTTATTTTATACAACTTTTGCAACTTGAACCACATTAAACTGAGTTACAATGAATTAGTTATGAATTTTTAAAGATTAAACTGGATTAAAACATTTATATGGATTTTAATTGAATTATGATGCAATAATGAATTATTTTTGAAAAGAAAAAGGGAATTATTGCGTCATCGGCTAGGGTTGGCGGAGGACCGGGTGCATGGCGACGGTTCACGAAAACGGACGGTCGAGATTCATCCATCCAAAACGGACGGCCAAGATCCATCGGTCCACGACCGGACCACGGCGGATGGCAACGATGACGTCGGCGATGACGTCATCACCGGCGACGGCTCGGCCTCGCGTGCTCGCCGGCGAACGATGGCGCGGCGGCGCAAACGGAGGACACCTACGCGTAGCGGACGGCACGGCGAACCCACCGGTGACCAAAACGACGGCGGAAGATCAACGGACGACGACGGCGACGAGGAAGAGCGGCGGCAACGATCGGGTCAACGGCGGCGACGATGCTCCAGCGGCTAACAGCGACGGCGAAAGGGCGGATGAGGACGGCGACGCGACGGCGACCACGGCGGTGACCTCCCCGAGCGACGACGACGACTAGAGCGACGGCGACGCACGGCTAGAGCGACGGCGGCGACAGCGGCGCGAGGCGGCATGGCGCTAGAGTTCTACCGGCTACGAGAGACTAAGGCGAGGGTGGCGGCGGGTAGAGGGGAGCTTGGGGGTCAATTTATAGGGGCTAGGGAGCGGCGGCGAAGGCCCACGGCGACCGGCGACGGGAAGGAAAGTTTAGGGTTCGGAGGAGAGAAATCGATCCGAAACGAACTCAAATCCGGCGATTTCCAAAGCGATTTAGACGATGTTTCCAAAAGGGAAAAGGTAGAGTGGATCACGGGGATCCTTTCCCCTCAATCAATTTCACCGGAAACGGAAAGGGAAGGCCGGATTTGGAATGGCGGCGGCGGCACAGCTCGGCTAGGGTTTCGGTGAGTGGAAGACGACGAATTTAGTGACTTTCCAAAATTTATTCTCACCTCGGTTTGAAAAGAAAATCTAAAATTTATATTTCACTCATGCTCGATCGATCAATCAGCCATGACGACGACGACGACGACGTCCGTAAAGCTTCTCCTGGCGTTCCAAGTAGCCCTCTGCCTCTGAGCCTCCTCCTCCTCCTTACTCGGAGACGACGACGAGTCGACGGATCGGCTGTCGCTGGCCGCGTTCAAGGAGGCGATCAGCCATGACCCGCGCCGCGCCCTCGCGTCCTGGAACGCCAGCGCCCACTTCTGCACCTGGGACGGCGTCCTCTGCAGCATCAGCGGCCGCGGTGGCGGCGGCCATGTCGTCACTCGCCTCAACATCACCGGCCGAGGCCTCGCCGGGCGGATCTCGCCGTGGCTCGGCAACCTCACGCGCCTGGAACGCCTCGTCCTCTCGGGCAACGAGCTCGTCGGCGGCATCCCGGCGTCCCTCGGCCGCCTGCAGCGGCTGCAGCTCCTCGACCTGACCAACAACACGCTGCAGGGGGTGATACCCCATCAGCTGGCCAACTGCTCCGGCCTGATGGCGCTGCGGCTGGGCGGCAACGATCTGGTTGGCCGGATTCCCGATCATCTGGCGCCGCCGCGCCACCATCGCCTTCGGATACTAGAGCTCGATCGCAACGATCTTGCCGGACACATCCCTGCATCTCTTGCCAACATCACGACGCTGAATGTGTTCTTGTGTGGAGGTAATCTTATCGAGGGAGGCATCCCGGATGAGTTCGCGAGGTTATCCAGCTTGCAGGTTTTGGATGTAGGTGAGAAACGACGACCTGTGTTTGAAGTCTCACCTATTAGGTCATTTTCTAATATTCGTGTTTTTTGGTTTTGGATGTAGGTCGAAATCGATTGACAAGTAG
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| CDS seq | ATGGCAAACTACTTGCCTGTGGCTCTAGCGGATTTTGCCCGGTCCTGGCTTCGTGGGTTACCCCGTGGCACAATCGGATCATGGGCGAAACTTCGCGACCACTTCATCGCCAACTTCCAGGGCACCTTTGAACGCCCTGGTACACATTTTGATCTCTACAATGTCATTCAGAAGTCTAGAGAATCCCTTCGAGATTACATCCGATGCTTTTCTGAGCAACGCAACAAGATCTTCGACATTACCGACGACGTCATCATCGCCGCCTTCACCAAGGGAATTCGTCACAAAGACCTAGTTGGCAAGTTCGGGCGCAAGCCTCCCAAGACGGTCAAGCAGATGTTTGAGAAAGCCAACGAGTATGCCAAAGCCGAAGATGCCATTATCGCGTACAAGCAGTCGGGCACCACGTGGAAGCCGAACAAAGATACGCCGACTACAGGGGGGAGTGGAAGTACCAATCATAAGGACCATAAGCACGACGACGAGTCGACGGATCGGCTGTCGCTGGCCGCGTTCAAGGAGGCGATCAGCCATGACCCGCGCCGCGCCCTCGCGTCCTGGAACGCCAGCGCCCACTTCTGCACCTGGGACGGCGTCCTCTGCAGCATCAGCGGCCGCGGTGGCGGCGGCCATGTCGTCACTCGCCTCAACATCACCGGCCGAGGCCTCGCCGGGCGGATCTCGCCGTGGCTCGGCAACCTCACGCGCCTGGAACGCCTCGTCCTCTCGGGCAACGAGCTCGTCGGCGGCATCCCGGCGTCCCTCGGCCGCCTGCAGCGGCTGCAGCTCCTCGACCTGACCAACAACACGCTGCAGGGGGTGATACCCCATCAGCTGGCCAACTGCTCCGGCCTGATGGCGCTGCGGCTGGGCGGCAACGATCTGGTTGGCCGGATTCCCGATCATCTGGCGCCGCCGCGCCACCATCGCCTTCGGATACTAGAGCTCGATCGCAACGATCTTGCCGGACACATCCCTGCATCTCTTGCCAACATCACGACGCTGAATGTGTTCTTGTGTGGAGGTAATCTTATCGAGGGAGGCATCCCGGATGAGTTCGCGAGGTCGAAATCGATTGACAAGTAG
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| Protein seq | MANYLPVALADFARSWLRGLPRGTIGSWAKLRDHFIANFQGTFERPGTHFDLYNVIQKSRESLRDYIRCFSEQRNKIFDITDDVIIAAFTKGIRHKDLVGKFGRKPPKTVKQMFEKANEYAKAEDAIIAYKQSGTTWKPNKDTPTTGGSGSTNHKDHKHDDESTDRLSLAAFKEAISHDPRRALASWNASAHFCTWDGVLCSISGRGGGGHVVTRLNITGRGLAGRISPWLGNLTRLERLVLSGNELVGGIPASLGRLQRLQLLDLTNNTLQGVIPHQLANCSGLMALRLGGNDLVGRIPDHLAPPRHHRLRILELDRNDLAGHIPASLANITTLNVFLCGGNLIEGGIPDEFARSKSIDK |
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| Function | LRR receptor-like serine/threonine-protein kinase EFR [UniProtKB/Swiss-Prot:C0LGT6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0270200 | OsZS97_11T0270200.1 | Chr11 | 19307098 | 19311322 | + | makerRMon | ||
| CDS seq | ATGGCAAACTACTTGCCTGTGGCTCTAGCGGATTTTGCCCGGTCCTGGCTTCGTGGGTTACCCCGTGGCACAATCGGATCATGGGCGAAACTTCGCGACCACTTCATCGCCAACTTCCAGGGCACCTTTGAACGCCCTGGTACACATTTTGATCTCTACAATGTCATTCAGAAGTCTAGAGAATCCCTTCGAGATTACATCCGATGCTTTTCTGAGCAACGCAACAAGATCTTCGACATTACCGACGACGTCATCATCGCCGCCTTCACCAAGGGAATTCGTCACAAAGACCTAGTTGGCAAGTTCGGGCGCAAGCCTCCCAAGACGGTCAAGCAGATGTTTGAGAAAGCCAACGAGTATGCCAAAGCCGAAGATGCCATTATCGCGTACAAGCAGTCGGGCACCACGTGGAAGCCGAACAAAGATACGCCGACTACAGGGGGGAGTGGAAGTACCAATCATAAGGACCATAAGCACGACGACGAGTCGACGGATCGGCTGTCGCTGGCCGCGTTCAAGGAGGCGATCAGCCATGACCCGCGCCGCGCCCTCGCGTCCTGGAACGCCAGCGCCCACTTCTGCACCTGGGACGGCGTCCTCTGCAGCATCAGCGGCCGCGGTGGCGGCGGCCATGTCGTCACTCGCCTCAACATCACCGGCCGAGGCCTCGCCGGGCGGATCTCGCCGTGGCTCGGCAACCTCACGCGCCTGGAACGCCTCGTCCTCTCGGGCAACGAGCTCGTCGGCGGCATCCCGGCGTCCCTCGGCCGCCTGCAGCGGCTGCAGCTCCTCGACCTGACCAACAACACGCTGCAGGGGGTGATACCCCATCAGCTGGCCAACTGCTCCGGCCTGATGGCGCTGCGGCTGGGCGGCAACGATCTGGTTGGCCGGATTCCCGATCATCTGGCGCCGCCGCGCCACCATCGCCTTCGGATACTAGAGCTCGATCGCAACGATCTTGCCGGACACATCCCTGCATCTCTTGCCAACATCACGACGCTGAATGTGTTCTTGTGTGGAGGTAATCTTATCGAGGGAGGCATCCCGGATGAGTTCGCGAGGTCGAAATCGATTGACAAGTAG
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| Protein seq | MANYLPVALADFARSWLRGLPRGTIGSWAKLRDHFIANFQGTFERPGTHFDLYNVIQKSRESLRDYIRCFSEQRNKIFDITDDVIIAAFTKGIRHKDLVGKFGRKPPKTVKQMFEKANEYAKAEDAIIAYKQSGTTWKPNKDTPTTGGSGSTNHKDHKHDDESTDRLSLAAFKEAISHDPRRALASWNASAHFCTWDGVLCSISGRGGGGHVVTRLNITGRGLAGRISPWLGNLTRLERLVLSGNELVGGIPASLGRLQRLQLLDLTNNTLQGVIPHQLANCSGLMALRLGGNDLVGRIPDHLAPPRHHRLRILELDRNDLAGHIPASLANITTLNVFLCGGNLIEGGIPDEFARSKSIDK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g28840 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004950 | SBH | 0.351912 | 0.244407 | 1.702016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0013810 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0256400 | RBH | 0.013583 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0013780 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0042100 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0013940 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004850 | SBH | 0.056974 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004840 | SBH | 0.012716 | 0.072135 | 0.295710 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0013770 | RBH | 0.0 | 0.0 | 0.0 |
