Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0067100 | OGI:10005900 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:4148166-4151228 | ||||||||
| Gene Symbol | OsFbox519 | ||||||||||
| DNA seq | TTAGTCAAGGCTTAGCTCCTGTTGTCTTTCTTTCCTTCCGCTGCATTTATGTAAAACTTTATGGTGTTTGTAAGACGTGGATCTGTATGTCAACATTGTCGTTTGTGTACCCCGGCTGGTCCTGGACGGGGAGTTTAATGCACATTCTGCTTGGAATTCTATTCGGGAATTTCTGGGCGTGACATATTCCGTCCTCAAAAATTCTTCGCTTTCCCAGGTGGCTTCGTCCTCAGTGTGATTACTCCATTGTACCTTGTACATACGCCACACTTTGCTTCTAGTCCTCTTTTCGGCTTCACCCAATATCCGGATCGGGTGTTCTGGATACGTAAGATCATTGCTAATGTGAATCTCTTCCAGCGGAGCTTGTTCTTCCGGCACTCGTAAGCATTTCTTTAATTGAGACACATGGAAGACTGGGTGCACATCAGCGATATTCTCTGGTAGCTGTAACTGGTATGCAACTTCTCCTCATTTAGCCGTGATTTGAAAAGGTCCCACATATCTTGGCGCTAGTTTTCCTTTGACCTTAAACCTTTTCGTTCCCCTCATCGGAGAAACCTTTAGATAAACGTAATCTCCTTCCTTAAACTCCAGGTTTCTTCTTCGGGTGTCGGCGTAACTCTTCTGTCGTGATTGTGCCACTTTTAGACGGTCTCGAATCAGGCGAACCTTTTCTTCGGCCTCTTTGATAATGTCAGGTCCAAATACTGCCCGTTCACCTGTCTCGGACCACATTAGTGGAGTTCGACATCGTCGACCAAACAATGCTTCATTGGGTGACATCTTTAGGCTCGCTTGGAAACTGTTGTTGTAGGAGAATTCGGCGTAGGGCAAACATCTCTCACAGTCTTTGCTAAAATCCAATGCACAGGCTCTCAGCATGTCCTCCAATACCTGGTTTGTTCTCTCCGTCTGGCCATCTGTCTGTGGATGATAAGCTGTGCTAAAAGCAAGATAACTTCCTAGGGCTTCATGTACTTTTTCCCAGAAATGCAAGGTAAACTGTGTGCCTCGATCGGATATAATCCTCTTAGGTATACCATGAAGACACACTATCCTGGTCATGTACAACTCGGCGAGTTTAGCACTGCTATAGTTTGTCTTGACGGGAATGAATCTTGCCGTCTTGGTGAGTCGATCCACAATCACCCAGATGGAATCGTACCCTGTTGCGGTCTTGGGCAATCCAACAATAAAATCCATACCTATCTCATCTCATTTCCACTCGGGAATCCTAAGGGGTTGCAGCAAACCTGCCGGTCTCTGGTGCTCAGCCTTCACCTTTTGGCACCAGTTGCGAACCCAACATTGCAGCAAACAAGAGCATGTTGAGTTACCAAATGGGAAATGCTCCAGTTTCATTGTGAAATCAAATAGCCAACTTCTTGCTTGACCAACAGGTTGATTGGTATACAAATAAACTGACAACATGAAATAGATTGCATCGAATGGTTGATGGCATCAGTGATCCTTAAAATCATCATGATTTCACACATAAGAATTAGTTATGCAACGCTTAGTTTTGAAGGTGTAATTGTGAATTGTGAAGTGTCAATAAGAAACACCGAGCTTGAATTTTTTCCTTTTTCATATCAATATCTACATTAAGATTCCTGGATATAATGAGGAAAGTGAGATGTGTAAGACCAATAAGCTTACCTTTTTTCTTCTCCCAACATAATCGAACTCCAAACTTTTAGCAGCAGAAAGGCTCCTGAGATTTTGGAAAAAATCACCAGAGTCTTGCACATGATAAAGTACCAGTAATGAAGTCACTAGTAATGGCATGTCATTAAGCACATATGTGCCAATCAAAGGGCTCCACAACTTCAGATAAGTAACACTGGGGGTCGAAATAGTAGTCTTGTTGCCATAGGAGACATGAGTATTCTTGATGGTCAAAACCTTCAGTGTCTGGGAGGAGATCTCAACATCCTCAACGCTGCATTCATTTAAGAAGAGACCTCTCATTGCTGGACAGCCCATCTCGAGTTGCTTGAAGAATCCTTGCATCAAAATAACATTGGTGAACTCAATTCTTCTGAGGTAGCGGCAATTGAATGCAGAGTGATTGAGCTCCAATTTGTCACACAGCAGGACAATATCCAGAAAGTGGGGCTGCTTCTGCACAGCGTGGCTAATCCATCCATTGATAGCTTTCGAGTCCAAGATATGGTTCATTTCCTCATTCAAATCCAATATGCACCTGAACCGAAACGTGTGTATCAAGGGGGCGGGGTCGCGGAGCTCATTCAGCCTTTCCATGAACATCTTGAACGCCAATTCCGTCTCTTGATCATAGTGCTCGGTATCTCTCCGCTTGAACTCGCTGATGTCAGCGTTGATGCAGGGCACGGTGCGCCAGAGGTTGCGCCACCGCCGCGACAGCACGCACATCCGCACAGCCTGGCGCATGGTCAGGAAGGACATGATGCGGAAGACGATGTCGTCGGGGAGGGTGCTGAGCCTGATCTTGCCAGGCGACCCCTCCATGGTGGCCGAGCACGCGCGCAGAGTTGTTTCGTCGAACAGATGGCGCGCGTGGAAACTGCACACAGAAGAGGAAGACCAAGAATCAGGAACCCATCAACCTGCAGCTTAACTTCGAAGAAATATCTGACACCGTAACACAAGAAACAACGGTTACAACGCTCGAGCAGGTTTTCCGTGAAGAACATCCAGAGAAGAAGGATCGATGCAAGAAGAGTTGGGAGGAAGGAAGGAAGGAAGGAACCGAGATTACTGTAGAATTTGGCCGACCGACCAAAGATGGTTTCTACAGTAGTGTAAGACCTACCCCTACTCACTGCTGCTCAAGTTTTCCCCGGTGCGTCGCCCCTTGTCGCCGCCACCTCGCGATTTCTCTCTCGACGCAGTGTCCGGCGACCTCACATCAACATACCACAACAGTAGCGCGGCAAAGCCGGTAGCACGAAGTTGCCGAGGTGCCGACGGCCGTCGCGGCGTCACACGCCGGTAGCAGAGCAAGCCGGTGGCAAGGTTGAAGGGCACATCATTGCGAGTTGCTTCGTGTTCTAGCCTCAAGAAATATATGTGCAT
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| CDS seq | ATGCACATATATTTCTTGAGGCTAGAACACGAAGCAACTCGCAATGATGTGCCCTTCAACCTTGCCACCGGCTTGCTCTGCTACCGGCGTGTGACGCCGCGACGGCCGTCGGCACCTCGGCAACTTCGTGCTACCGGCTTTGCCGCGCTACTGTTGTGTTTCCACGCGCGCCATCTGTTCGACGAAACAACTCTGCGCGCGTGCTCGGCCACCATGGAGGGGTCGCCTGGCAAGATCAGGCTCAGCACCCTCCCCGACGACATCGTCTTCCGCATCATGTCCTTCCTGACCATGCGCCAGGCTGTGCGGATGTGCGTGCTGTCGCGGCGGTGGCGCAACCTCTGGCGCACCGTGCCCTGCATCAACGCTGACATCAGCGAGTTCAAGCGGAGAGATACCGAGCACTATGATCAAGAGACGGAATTGGCGTTCAAGATGTTCATGGAAAGGCTGAATGAGCTCCGCGACCCCGCCCCCTTGATACACACGTTTCGGTTCAGGTGCATATTGGATTTGAATGAGGAAATGAACCATATCTTGGACTCGAAAGCTATCAATGGATGGATTAGCCACGCTGTGCAGAAGCAGCCCCACTTTCTGGATATTGTCCTGCTGTGTGACAAATTGGAGCTCAATCACTCTGCATTCAATTGCCGCTACCTCAGAAGAATTGAGTTCACCAATGTTATTTTGATGCAAGGATTCTTCAAGCAACTCGAGATGGGCTGTCCAGCAATGAGAGGTCTCTTCTTAAATGAATGCAGCGTTGAGGATGTTGAGATCTCCTCCCAGACACTGAAGGTTTTGACCATCAAGAATACTCATGTCTCCTATGGCAACAAGACTACTATTTCGACCCCCAGTGTTACTTATCTGAAGTTGTGGAGCCCTTTGATTGGCACATATGTGCTTAATGACATGCCATTACTAGTGACTTCATTACTGGTACTTTATCATGTGCAAGACTCTGGTGATTTTTTCCAAAATCTCAGGAGCCTTTCTGCTGCTAAAAGTTTGGAGTTCGATTATGTTGGGAGAAGAAAAAAGACCGCAACAGGGTACGATTCCATCTGGGTGATTGTGGATCGACTCACCAAGACGGCAAGATTCATTCCCGTCAAGACAAACTATAGCAGTGCTAAACTCGCCGAGTTGTACATGACCAGGATAGTGTGTCTTCATGGTATACCTAAGAGGATTATATCCGATCGAGGCACACAGTTTACCTTGCATTTCTGGGAAAAAGTACATGAAGCCCTAGGAAGTTATCTTGCTTTTAGCACAGCTTATCATCCACAGACAGATGGCCAGACGGAGAGAACAAACCAGGTATTGGAGGACATGCTGAGAGCCTGTGCATTGGATTTTAGCAAAGACTGTGAGAGATGTTTGCCCTACGCCGAATTCTCCTACAACAACAGTTTCCAAGCGAGCCTAAAGATGTCACCCAATGAAGCATTGTTTGGTCGACGATGTCGAACTCCACTAATGTGGTCCGAGACAGGTGAACGGGCAGTATTTGGACCTGACATTATCAAAGAGGCCGAAGAAAAGGTTCGCCTGATTCGAGACCGTCTAAAAGTGGCACAATCACGACAGAAGAGTTACGCCGACACCCGAAGAAGAAACCTGGAGTTTAAGGAAGGAGATTACGTTTATCTAAAGGTTTCTCCGATGAGGGGAACGAAAAGGTTTAAGAAATGCTTACGAGTGCCGGAAGAACAAGCTCCGCTGGAAGAGATTCACATTAGCAATGATCTTACGTATCCAGAACACCCGATCCGGATATTGGGTGAAGCCGAAAAGAGGACTAGAAGCAAAGTGTGGCGTATGTACAAGGTACAATGGAGTAATCACACTGAGGACGAAGCCACCTGGGAAAGCGAAGAATTTTTGAGGACGGAATATGTCACGCCCAGAAATTCCCGAATAGAATTCCAAGCAGAATGTGCATTAAACTCCCCGTCCAGGACCAGCCGGGGTACACAAACGACAATGTTGACATACAGATCCACGTCTTACAAACACCATAAAGTTTTACATAAATGCAGCGGAAGGAAAGAAAGACAACAGGAGCTAAGCCTTGACTAA
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| Protein seq | MHIYFLRLEHEATRNDVPFNLATGLLCYRRVTPRRPSAPRQLRATGFAALLLCFHARHLFDETTLRACSATMEGSPGKIRLSTLPDDIVFRIMSFLTMRQAVRMCVLSRRWRNLWRTVPCINADISEFKRRDTEHYDQETELAFKMFMERLNELRDPAPLIHTFRFRCILDLNEEMNHILDSKAINGWISHAVQKQPHFLDIVLLCDKLELNHSAFNCRYLRRIEFTNVILMQGFFKQLEMGCPAMRGLFLNECSVEDVEISSQTLKVLTIKNTHVSYGNKTTISTPSVTYLKLWSPLIGTYVLNDMPLLVTSLLVLYHVQDSGDFFQNLRSLSAAKSLEFDYVGRRKKTATGYDSIWVIVDRLTKTARFIPVKTNYSSAKLAELYMTRIVCLHGIPKRIISDRGTQFTLHFWEKVHEALGSYLAFSTAYHPQTDGQTERTNQVLEDMLRACALDFSKDCERCLPYAEFSYNNSFQASLKMSPNEALFGRRCRTPLMWSETGERAVFGPDIIKEAEEKVRLIRDRLKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKKCLRVPEEQAPLEEIHISNDLTYPEHPIRILGEAEKRTRSKVWRMYKVQWSNHTEDEATWESEEFLRTEYVTPRNSRIEFQAECALNSPSRTSRGTQTTMLTYRSTSYKHHKVLHKCSGRKERQQELSLD |
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| Function | Transposon Ty3-G Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q99315] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0067100 | OsZS97_10T0067100.1 | Chr10 | 4148166 | 4151228 | - | makerRMon | ||
| CDS seq | ATGCACATATATTTCTTGAGGCTAGAACACGAAGCAACTCGCAATGATGTGCCCTTCAACCTTGCCACCGGCTTGCTCTGCTACCGGCGTGTGACGCCGCGACGGCCGTCGGCACCTCGGCAACTTCGTGCTACCGGCTTTGCCGCGCTACTGTTGTGTTTCCACGCGCGCCATCTGTTCGACGAAACAACTCTGCGCGCGTGCTCGGCCACCATGGAGGGGTCGCCTGGCAAGATCAGGCTCAGCACCCTCCCCGACGACATCGTCTTCCGCATCATGTCCTTCCTGACCATGCGCCAGGCTGTGCGGATGTGCGTGCTGTCGCGGCGGTGGCGCAACCTCTGGCGCACCGTGCCCTGCATCAACGCTGACATCAGCGAGTTCAAGCGGAGAGATACCGAGCACTATGATCAAGAGACGGAATTGGCGTTCAAGATGTTCATGGAAAGGCTGAATGAGCTCCGCGACCCCGCCCCCTTGATACACACGTTTCGGTTCAGGTGCATATTGGATTTGAATGAGGAAATGAACCATATCTTGGACTCGAAAGCTATCAATGGATGGATTAGCCACGCTGTGCAGAAGCAGCCCCACTTTCTGGATATTGTCCTGCTGTGTGACAAATTGGAGCTCAATCACTCTGCATTCAATTGCCGCTACCTCAGAAGAATTGAGTTCACCAATGTTATTTTGATGCAAGGATTCTTCAAGCAACTCGAGATGGGCTGTCCAGCAATGAGAGGTCTCTTCTTAAATGAATGCAGCGTTGAGGATGTTGAGATCTCCTCCCAGACACTGAAGGTTTTGACCATCAAGAATACTCATGTCTCCTATGGCAACAAGACTACTATTTCGACCCCCAGTGTTACTTATCTGAAGTTGTGGAGCCCTTTGATTGGCACATATGTGCTTAATGACATGCCATTACTAGTGACTTCATTACTGGTACTTTATCATGTGCAAGACTCTGGTGATTTTTTCCAAAATCTCAGGAGCCTTTCTGCTGCTAAAAGTTTGGAGTTCGATTATGTTGGGAGAAGAAAAAAGACCGCAACAGGGTACGATTCCATCTGGGTGATTGTGGATCGACTCACCAAGACGGCAAGATTCATTCCCGTCAAGACAAACTATAGCAGTGCTAAACTCGCCGAGTTGTACATGACCAGGATAGTGTGTCTTCATGGTATACCTAAGAGGATTATATCCGATCGAGGCACACAGTTTACCTTGCATTTCTGGGAAAAAGTACATGAAGCCCTAGGAAGTTATCTTGCTTTTAGCACAGCTTATCATCCACAGACAGATGGCCAGACGGAGAGAACAAACCAGGTATTGGAGGACATGCTGAGAGCCTGTGCATTGGATTTTAGCAAAGACTGTGAGAGATGTTTGCCCTACGCCGAATTCTCCTACAACAACAGTTTCCAAGCGAGCCTAAAGATGTCACCCAATGAAGCATTGTTTGGTCGACGATGTCGAACTCCACTAATGTGGTCCGAGACAGGTGAACGGGCAGTATTTGGACCTGACATTATCAAAGAGGCCGAAGAAAAGGTTCGCCTGATTCGAGACCGTCTAAAAGTGGCACAATCACGACAGAAGAGTTACGCCGACACCCGAAGAAGAAACCTGGAGTTTAAGGAAGGAGATTACGTTTATCTAAAGGTTTCTCCGATGAGGGGAACGAAAAGGTTTAAGAAATGCTTACGAGTGCCGGAAGAACAAGCTCCGCTGGAAGAGATTCACATTAGCAATGATCTTACGTATCCAGAACACCCGATCCGGATATTGGGTGAAGCCGAAAAGAGGACTAGAAGCAAAGTGTGGCGTATGTACAAGGTACAATGGAGTAATCACACTGAGGACGAAGCCACCTGGGAAAGCGAAGAATTTTTGAGGACGGAATATGTCACGCCCAGAAATTCCCGAATAGAATTCCAAGCAGAATGTGCATTAAACTCCCCGTCCAGGACCAGCCGGGGTACACAAACGACAATGTTGACATACAGATCCACGTCTTACAAACACCATAAAGTTTTACATAAATGCAGCGGAAGGAAAGAAAGACAACAGGAGCTAAGCCTTGACTAA
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| Protein seq | MHIYFLRLEHEATRNDVPFNLATGLLCYRRVTPRRPSAPRQLRATGFAALLLCFHARHLFDETTLRACSATMEGSPGKIRLSTLPDDIVFRIMSFLTMRQAVRMCVLSRRWRNLWRTVPCINADISEFKRRDTEHYDQETELAFKMFMERLNELRDPAPLIHTFRFRCILDLNEEMNHILDSKAINGWISHAVQKQPHFLDIVLLCDKLELNHSAFNCRYLRRIEFTNVILMQGFFKQLEMGCPAMRGLFLNECSVEDVEISSQTLKVLTIKNTHVSYGNKTTISTPSVTYLKLWSPLIGTYVLNDMPLLVTSLLVLYHVQDSGDFFQNLRSLSAAKSLEFDYVGRRKKTATGYDSIWVIVDRLTKTARFIPVKTNYSSAKLAELYMTRIVCLHGIPKRIISDRGTQFTLHFWEKVHEALGSYLAFSTAYHPQTDGQTERTNQVLEDMLRACALDFSKDCERCLPYAEFSYNNSFQASLKMSPNEALFGRRCRTPLMWSETGERAVFGPDIIKEAEEKVRLIRDRLKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKKCLRVPEEQAPLEEIHISNDLTYPEHPIRILGEAEKRTRSKVWRMYKVQWSNHTEDEATWESEEFLRTEYVTPRNSRIEFQAECALNSPSRTSRGTQTTMLTYRSTSYKHHKVLHKCSGRKERQQELSLD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0082115 | 0.9800175 | 0.0360775 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0129100 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g06830 | SBH | 0.546220 | 0.188032 | 0.038574 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0129100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0003170 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0003530 | RBH | 2.942142 | 8.098986 | 4.598973 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0031800 | SBH | 0.394214 | 1.1757945 | 0.7663015 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0003670 | RBH | 0.019392 | 0.0 | 0.746464 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0003490 | RBH | 0.000000 | 0.057889 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002940 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0003740 | RBH | 0.062828 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G003620 | SBH | 0.000000 | 1.136633 | 1.490405 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
