Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_08G0422400 | OGI:08072550 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr08:26878160-26882187 | ||||||||
| Gene Symbol | JMJ717, - | ||||||||||
| DNA seq | CTATGTCCATACAAATTTGTCTTGTTTCTTTAGCAGAGCGAAGAAAGGTTGCCCTCGTTCTCCCATCCTAGCGACGAATCTGCTCAGTGCTGCCATGCATCCAGTTAGATTTTGTACTTCCTTGAGTCTTGTGGGCGACTTCATGTTCTCGATTGCCTTGATCTTCTCGGGATTTGCTTCTATTCCTCTGCTAGAGACAAGGAATCCGAGTAGTTTGCCCGACGGTACTCCGAACGTGCACTTCTCTGGGTTGAGCATGAGGCGATATCATCGGAGGTTGTCGAACATTTCCCGCAGGTCGTCAATCAATGAGTCGCTTGTCTTGGTCTTGACGACGATGTCGTCGACGTATGCCTCAACATTGTTGCCGAGCTGGTCGCTAAGTGCGCCCTGGACCGTGCGCTGGAAAGTATTCCCTGCAGTTATCAGTCCAAACGGCATCTTGACATAGCAAAATACCCCGAATGGCGTGATGAATGATGTCTTCTCTTTGTCCTCTTTTGCTATGCTGATTTGGTGGTAGCCTGAATAAGCGTCGAGAAAACTCAACAGCTCACAGCCGGCTGTTGAGTCCACCAGTTGATCTATTCGAGGGAGAGGGAAGTGATCCTTGGGACACGCCTTGTTGAGGTCGGTGAAGTCGACGCACATTCTCCATTTCCCGTTGGCCTTCCGCACCATGACTGGATTGGCTAGCCACTCTGGATGAAGTACTTCTCTGATGAAGCCAGCTTTGAGAAGTTTGTCGAGTTCTTCTCGTATGGCTTGTTTTCGGTCTGGTGCAAATCTCTGCAGTCTTTGCTTTACTGGCTTGGCATCGGGTCGCACCATGAGTTTGTGCTCAATCACCTCCCTGGGGACCCCCGGCATGTCGAAGAGCTGCCAAGCGAACACGTCAGCATTGTCGCGGAGGAAGGTGATGAGCGCGAGTTCCTATTTCTTGCTTAGTGTCGCCCCGATCTTGACGGTCTTGTCGGGGTTGGCACTGGAGAGTGGAACGATCTTGATTGCGCCGTCCGGTTTCGGTGTCTTGTTTGTCTTGCTCACTTTCTTGGGTGGCTCAGTCGTGGCGGATGGGCTGGGCGTTTGCTCGACCATGTCGAGGCTCCGTTTGTCGCATTGCACCGCCAGCTTTGCGTTCCCTTGAATAGTGATTGTTCCCTTCGGTCCCGGCATCTTGAGCACTTGATACGCGTAGTGAGATGCGGCCATAAACTTCGCAAGTGCAGTTCTCCCGATGATGGCGTTGTAAGCTGTATCGAATTCAGCGACATCAAAGGTGATTTGCTCCGTTCGGAAGTTGTTAGCTTGGCCGAAAGTCACAGGCAACGTAATCTTACCCAATGGTCTGGACGAGGATTGGGGAGTGATTCCATGAAAGGGTTGATCGGTTGGTGTCAACTTGCTTTGTGGAATTCCCATCGCGTCCAAAGTGCTGGCGAAAAGAAGGTTGATTGAGCTGCCACCATCGATGAGAACCCGCGCGACCTTGATGTTCCGAATAGTGGGTTCGACCACGATCGGATATCGTCCTGGGATGATGGCGGTCTTGGGGTGGTCTTCTTCCGAGAACTCTATCTTCTATTCAGACCACTTCATCTTGGGTGCAGCCCCCTACCATGTCGAACAGACTTCGCGTTCCACTTTCTTGTACTCTCGCTTCGAGGAGTACGTTGTGGAACCTCCGAAGATGTGTGAAACGTGGAGGTCAAAGTCTGGATATGCTGAATCCGATTCCTGGGGAGCCGCCTCCGCATCCTTTTCGACCACGCATACTCGCTTGCCTTTTTCAAATGCAATGTGCTTCTCGAGTTATTTTTTGAAAACAAGGCAATCTTCCAAAGAATGTCTGTCCATCTTATGTATGGGGCACCATGCTTTCTTTGTGTCGCTACTCTGTGGGTCTGGGCGCTTGGGAGGGTTCGCGTATTCTGCTGCGAGGTCTTCCGCTTGAGCTTTCCTTTTCCCATTTTTGTGATTTTTCTTCTTGCTTGACTCAGGTGCGTCCGTGGCTGGTTTCTTCTCTCCCCCGGTCTTTGGCTTATCATTCTTGCGTCTTAGCGCATCATCTGCGTGGGCGCATCGCTCAACAATTTCGAACAATCTCCGAGTAGTTGTGATGCGTCTTGTCGCCAATTCCTGAGTAGTATAGCGATCTCTGACACCGGATTTGAAGGCGCGAATTACAGAAGCGTTGGTGATTTCGGGGATTGTATTTCTGCACTCGTTGAAGTGCCGAACATACTCCCTCAAGGATTCACCCGAGTTCTGTGTCAACGCGTGTAGGTCGTCTTCGATCGCGTGGCGCTTGTAGTTTCCTTGGAAGTTGGCGACGAACTGCTGCCACAGGTCTGCCCACGAAGAGATTGAGTAGGGCGGGAGATGCATCAGCCATGAACGTGCAGAGCCTTTTAACGCAGTTGGCAAATAATTCGCCAATGCGTTATCGTCTGCTCCGGCAGCGTAGAGTACTGTGGAGTAGACTTGAAGGAACTCTTCTGGGTCGGTGCTCCCATCGTACTTTTCTATTGCTCCAGGTCGGAATCTCTCAGGCCATCGGACATCACGCAGGGAACGACTGAAAGCTCTACACCCAACGCTGGGGACGGTGGGTTGTCGGCGATCGTGTGTCCTTCGTGGATGTTTGTCTGATGATGAAGAAGACGAGGATGATGACGATGATGATGGGTCGCTCGATTCCGGCGTACGGTTATGAGGATGTCGGCCTGGATCTCGAGTCCTGTCGTCGTCTCCCGCTGTTGTCTCGGCGATGGTCTCCATCATCGTCGTCATTATGGCGACGTCCTCGATCGACTAGTATCACCTGGCACCCGCCGTTCGCGATCGTTGTGATCGTGGCGGTGGTGGCGGTTATCACGGTCTCGGTCTTCGTTTGAGCGGTCTCCTCGATCTTCGTTATCATGGCGCTGTGAAGAGACATGACGCCGGGAATGATTCTCGTTGTCTCGTGTGCGTCGTGCCTCTCGGCGGCCGTTGAGGTGATCTCGGAGATCGCCAGTGCCGCGAGGTGGAGGGGTAGCTCGATGAGGCGATTCCCTCCATTCAGGGTCTTCACCATTGACATCGCCAGTTGGTGGCTGCTCCGGGTGCGCTGCGGCAGCGGCCTCTCCGAACGCGTTGCTGAGGTTGGTCACTGATTCCCGTAGTCGTTCTGTCCAACGTGCGAGATCGTCGTTCAGAACAGGATCGTAGGGGGTTTCCCTCAGTATAGCGTTGACGGCTCTGATGTGCTGGGCTAGAGTGGCCAATTGATTCTCCGCTTCTGCATTGGTGCGCGCTGACGTGCCGACATCATCGATAGCCAGTACCTCCCGCGGCGCGCTCGTTGTCGATGATCCATAGTCTACGAGAAGGTGCAAGACTGATGGTTCGTGGGGATCGATATCGATTACCCCAACAAATTGATCTGAGGTTGGCATCGCTCCTTGTTCCTTGTCTTTATCCCTGATGGGGATGTGTGACTGTTGGACTTTAGGAGATGGCGCTTTCATGGCGCTGAGAAAGACCTTGCAGCTGGAGAGGTCGTGATTCTTCGTCTTGTGAATAGGACAATAGACATCACGAGTTGGAGAAATACGCTGAATTCCACGCTCTTTGCAGGCGCGAATTTCAGCGCGGACGTTGAGAAAAACCCAGCAGGCTTGCAAAGTGTGTTTCCTGGTTTTGTGGATAGGACACCAGGACTTTGTCGCTTCGGAAGTCATCTTCGTCGGTTCGCGGTTCATGTCGGGACGACAAGGTTTGGCCGCATTAGAATCCTTCTCGAGCTCGGATGTCGTCGATGTTCCGTTCTCCGCCTCGGCGGGAGGATCTTTCGACAAGGAGTCGTCTTGGTTTGTAGCCACTGCGTTCTCGTTTCCGGTCATTGATGGACCGGCTGAGATCGGCATTGTAGTGTAAACCGGGAAGACGATTTCGTCGACTTGAGTCCACACCAGCATTGTTGAAGCAGGGAATACTTGGTTGAGGTTGATGTTGACGCTGTTGTCGACGAAACTGGATGACAT
More
|
||||||||||
| CDS seq | ATGTCATCCAGTTTCGTCGACAACAGCGTCAACATCAACCTCAACCAAGTATTCCCTGCTTCAACAATGCTGGTGTGGACTCAAGTCGACGAAATCGTCTTCCCGGTTTACACTACAATGCCGATCTCAGCCGGTCCATCAATGACCGGAAACGAGAACGCAGTGGCTACAAACCAAGACGACTCCTTGTCGAAAGATCCTCCCGCCGAGGCGGAGAACGGAACATCGACGACATCCGAGCTCGAGAAGGATTCTAATGCGGCCAAACCTTGTCGTCCCGACATGAACCGCGAACCGACGAAGATGACTTCCGAAGCGACAAAGTCCTGGTGTCCTATCCACAAAACCAGGAAACACACTTTGCAAGCCTGCTGGGTTTTTCTCAACGTCCGCGCTGAAATTCGCGCCTGCAAAGAGCGTGGAATTCAGCGTATTTCTCCAACTCGTGATGTCTATTGTCCTATTCACAAGACGAAGAATCACGACCTCTCCAGCTGCAAGGTCTTTCTCAGCGCCATGAAAGCGCCATCTCCTAAAGTCCAACAGTCACACATCCCCATCAGGGATAAAGACAAGGAACAAGGAGCGATGCCAACCTCAGATCAATTTGTTGGGGTAATCGATATCGATCCCCACGAACCATCAGTCTTGCACCTTCTCGTAGACTATGGATCATCGACAACGAGCGCGCCGCGGGAGGTACTGGCTATCGATGATGTCGGCACGTCAGCGCGCACCAATGCAGAAGCGGAGAATCAATTGGCCACTCTAGCCCAGCACATCAGAGCCGTCAACGCTATACTGAGGGAAACCCCCTACGATCCTGTTCTGAACGACGATCTCGCACGTTGGACAGAACGACTACGGGAATCAGTGACCAACCTCAGCAACGCGTTCGGAGAGGCCGCTGCCGCAGCGCACCCGGAGCAGCCACCAACTGGCGATGTCAATGGTGAAGACCCTGAATGGAGGGAATCGCCTCATCGAGCTACCCCTCCACCTCGCGGCACTGGCGATCTCCGAGATCACCTCAACGGCCGCCGAGAGGCACGACGCACACGAGACAACGAGAATCATTCCCGGCGTCATGTCTCTTCACAGCGCCATGATAACGAAGATCGAGGAGACCGCTCAAACGAAGACCGAGACCGTGATAACCGCCACCACCGCCACGATCACAACGATCGCGAACGGCGGGTGCCAGCGGGAGACGACGACAGGACTCGAGATCCAGGCCGACATCCTCATAACCGTACGCCGGAATCGAGCGACCCATCATCATCGTCATCATCCTCGTCTTCTTCATCATCAGACAAACATCCACGAAGGACACACGATCGCCGACAACCCACCGTCCCCAGCGTTGGGTGTAGAGCTTTCAGTCGTTCCCTGCGTGATGTCCGATGGCCTGAGAGATTCCGACCTGGAGCAATAGAAAAGTACGATGGGAGCACCGACCCAGAAGAGTTCCTTCAAGTCTACTCCACAGTACTCTACGCTGCCGGAGCAGACGATAACGCATTGGCGAATTATTTGCCAACTGCGTTAAAAGGCTCTGCACGTTCATGGCTGATGCATCTCCCGCCCTACTCAATCTCTTCGTGGGCAGACCTGTGGCAGCAGTTCGTCGCCAACTTCCAAGGAAACTACAAGCGCCACGCGATCGAAGACGACCTACACGCGTTGACACAGAACTCGGGTGAATCCTTGAGGGAGTATGTTCGGCACTTCAACGAGTGCAGAAATACAATCCCCGAAATCACCAACGCTTCTGTAATTCGCGCCTTCAAATCCGGTGTCAGAGATCGCTATACTACTCAGGAATTGGCGACAAGACGCATCACAACTACTCGGAGATTGTTCGAAATTGTTGAGCGATGCGCCCACGCAGATGATGCGCTAAGACGCAAGAATGATAAGCCAAAGACCGGGGGAGAGAAGAAACCAGCCACGGACGCACCTGAGTCAAGCAAGAAGAAAAATCACAAAAATGGGAAAAGGAAAGCTCAAGCGGAAGACCTCGCAGCAGAATACGCGAACCCTCCCAAGCGCCCAGACCCACAGAGTAGCGACACAAAGAAAGCATGGTGCCCCATACATAAGATGGACAGACATTCTTTGGAAGATTGCCTTGATGCGGAGGCGGCTCCCCAGGAATCGGATTCAGCATATCCAGACTTTGACCTCCACGTTTCACACATCTTCGGAGGTTCCACAACGTACTCCTCGAAGCGAGAGTACAAGAAAGTGGAACGCGAAAAGATAGAGTTCTCGGAAGAAGACCACCCCAAGACCGCCATCATCCCAGGACGATATCCGATCGTGGTCGAACCCACTATTCGGAACATCAAGGTCGCGCGGGTTCTCATCGATGGTGGCAGCTCAATCAACCTTCTTTTCGCCAGCACTTTGGACGCGATGGGAATTCCACAAAGCAAGTTGACACCAACCGATCAACCCTTTCATGGAATCACTCCCCAATCCTCGTCCAGACCATTGGGTAAGATTACGTTGCCTGTGACTTTCGGCCAAGCTAACAACTTCCGAACGGAGCAAATCACCTTTGATGTCGCTGAATTCGATACAGCTTACAACGCCATCATCGGGAGAACTGCACTTGCGAAGTTTATGGCCGCATCTCACTACGCGTATCAAGTGCTCAAGATGCCGGGACCGAAGGGAACAATCACTATTCAAGGGAACGCAAAGCTGGCGGTGCAATGCGACAAACGGAGCCTCGACATGGTCGAGCAAACGCCCAGCCCATCCGCCACGACTGAGCCACCCAAGAAACTCTTCGACATGCCGGGGGTCCCCAGGGAGGTGATTGAGCACAAACTCATGGTGCGACCCGATGCCAAGCCAGTAAAGCAAAGACTGCAGAGATTTGCACCAGACCGAAAACAAGCCATACGAGAAGAACTCGACAAACTTCTCAAAGCTGGCTTCATCAGAGAAGTACTTCATCCAGAGTGGCTAGCCAATCCAGTCATGGTGCGGAAGGCCAACGGGAAATGGAGAATGTGCGTCGACTTCACCGACCTCAACAAGGCGTGTCCCAAGGATCACTTCCCTCTCCCTCGAATAGATCAACTGGTGGACTCAACAGCCGGCTGTGAGCTGTTGAGTTTTCTCGACGCTTATTCAGGCTACCACCAAATCAGCATAGCAAAAGAGGACAAAGAGAAGACATCATTCATCACGCCATTCGGGGTATTTTGCTATGTCAAGATGCCGTTTGGACTGATAACTGCAGGGAATACTTTCCAGCGCACGGTCCAGGGCGCACTTAGCGACCAGCTCGGCAACAATGTTGAGGCATACGTCGACGACATCGTCGTCAAGACCAAGACAAGCGACTCATTGATTGACGACCTGCGGGAAATAGAAGTGCACGTTCGGAGTACCGTCGGAGGAATAGAAGCAAATCCCGAGAAGATCAAGGCAATCGAGAACATGAAGTCGCCCACAAGACTCAAGGAAGTACAAAATCTAACTGGATGCATGGCAGCACTGAGCAGATTCGTCGCTAGGATGGGAGAACGAGGGCAACCTTTCTTCGCTCTGCTAAAGAAACAAGACAAATTTGTATGGACATAG
More
|
||||||||||
| Protein seq | MSSSFVDNSVNINLNQVFPASTMLVWTQVDEIVFPVYTTMPISAGPSMTGNENAVATNQDDSLSKDPPAEAENGTSTTSELEKDSNAAKPCRPDMNREPTKMTSEATKSWCPIHKTRKHTLQACWVFLNVRAEIRACKERGIQRISPTRDVYCPIHKTKNHDLSSCKVFLSAMKAPSPKVQQSHIPIRDKDKEQGAMPTSDQFVGVIDIDPHEPSVLHLLVDYGSSTTSAPREVLAIDDVGTSARTNAEAENQLATLAQHIRAVNAILRETPYDPVLNDDLARWTERLRESVTNLSNAFGEAAAAAHPEQPPTGDVNGEDPEWRESPHRATPPPRGTGDLRDHLNGRREARRTRDNENHSRRHVSSQRHDNEDRGDRSNEDRDRDNRHHRHDHNDRERRVPAGDDDRTRDPGRHPHNRTPESSDPSSSSSSSSSSSSDKHPRRTHDRRQPTVPSVGCRAFSRSLRDVRWPERFRPGAIEKYDGSTDPEEFLQVYSTVLYAAGADDNALANYLPTALKGSARSWLMHLPPYSISSWADLWQQFVANFQGNYKRHAIEDDLHALTQNSGESLREYVRHFNECRNTIPEITNASVIRAFKSGVRDRYTTQELATRRITTTRRLFEIVERCAHADDALRRKNDKPKTGGEKKPATDAPESSKKKNHKNGKRKAQAEDLAAEYANPPKRPDPQSSDTKKAWCPIHKMDRHSLEDCLDAEAAPQESDSAYPDFDLHVSHIFGGSTTYSSKREYKKVEREKIEFSEEDHPKTAIIPGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSKLTPTDQPFHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPKGTITIQGNAKLAVQCDKRSLDMVEQTPSPSATTEPPKKLFDMPGVPREVIEHKLMVRPDAKPVKQRLQRFAPDRKQAIREELDKLLKAGFIREVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAGCELLSFLDAYSGYHQISIAKEDKEKTSFITPFGVFCYVKMPFGLITAGNTFQRTVQGALSDQLGNNVEAYVDDIVVKTKTSDSLIDDLREIEVHVRSTVGGIEANPEKIKAIENMKSPTRLKEVQNLTGCMAALSRFVARMGERGQPFFALLKKQDKFVWT |
||||||||||
| Function | Transposon Ty3-G Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q99315] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_08G0422400 | OsZS97_08T0422400.1 | Chr08 | 26878160 | 26882187 | - | makerRMon | ||
| CDS seq | ATGTCATCCAGTTTCGTCGACAACAGCGTCAACATCAACCTCAACCAAGTATTCCCTGCTTCAACAATGCTGGTGTGGACTCAAGTCGACGAAATCGTCTTCCCGGTTTACACTACAATGCCGATCTCAGCCGGTCCATCAATGACCGGAAACGAGAACGCAGTGGCTACAAACCAAGACGACTCCTTGTCGAAAGATCCTCCCGCCGAGGCGGAGAACGGAACATCGACGACATCCGAGCTCGAGAAGGATTCTAATGCGGCCAAACCTTGTCGTCCCGACATGAACCGCGAACCGACGAAGATGACTTCCGAAGCGACAAAGTCCTGGTGTCCTATCCACAAAACCAGGAAACACACTTTGCAAGCCTGCTGGGTTTTTCTCAACGTCCGCGCTGAAATTCGCGCCTGCAAAGAGCGTGGAATTCAGCGTATTTCTCCAACTCGTGATGTCTATTGTCCTATTCACAAGACGAAGAATCACGACCTCTCCAGCTGCAAGGTCTTTCTCAGCGCCATGAAAGCGCCATCTCCTAAAGTCCAACAGTCACACATCCCCATCAGGGATAAAGACAAGGAACAAGGAGCGATGCCAACCTCAGATCAATTTGTTGGGGTAATCGATATCGATCCCCACGAACCATCAGTCTTGCACCTTCTCGTAGACTATGGATCATCGACAACGAGCGCGCCGCGGGAGGTACTGGCTATCGATGATGTCGGCACGTCAGCGCGCACCAATGCAGAAGCGGAGAATCAATTGGCCACTCTAGCCCAGCACATCAGAGCCGTCAACGCTATACTGAGGGAAACCCCCTACGATCCTGTTCTGAACGACGATCTCGCACGTTGGACAGAACGACTACGGGAATCAGTGACCAACCTCAGCAACGCGTTCGGAGAGGCCGCTGCCGCAGCGCACCCGGAGCAGCCACCAACTGGCGATGTCAATGGTGAAGACCCTGAATGGAGGGAATCGCCTCATCGAGCTACCCCTCCACCTCGCGGCACTGGCGATCTCCGAGATCACCTCAACGGCCGCCGAGAGGCACGACGCACACGAGACAACGAGAATCATTCCCGGCGTCATGTCTCTTCACAGCGCCATGATAACGAAGATCGAGGAGACCGCTCAAACGAAGACCGAGACCGTGATAACCGCCACCACCGCCACGATCACAACGATCGCGAACGGCGGGTGCCAGCGGGAGACGACGACAGGACTCGAGATCCAGGCCGACATCCTCATAACCGTACGCCGGAATCGAGCGACCCATCATCATCGTCATCATCCTCGTCTTCTTCATCATCAGACAAACATCCACGAAGGACACACGATCGCCGACAACCCACCGTCCCCAGCGTTGGGTGTAGAGCTTTCAGTCGTTCCCTGCGTGATGTCCGATGGCCTGAGAGATTCCGACCTGGAGCAATAGAAAAGTACGATGGGAGCACCGACCCAGAAGAGTTCCTTCAAGTCTACTCCACAGTACTCTACGCTGCCGGAGCAGACGATAACGCATTGGCGAATTATTTGCCAACTGCGTTAAAAGGCTCTGCACGTTCATGGCTGATGCATCTCCCGCCCTACTCAATCTCTTCGTGGGCAGACCTGTGGCAGCAGTTCGTCGCCAACTTCCAAGGAAACTACAAGCGCCACGCGATCGAAGACGACCTACACGCGTTGACACAGAACTCGGGTGAATCCTTGAGGGAGTATGTTCGGCACTTCAACGAGTGCAGAAATACAATCCCCGAAATCACCAACGCTTCTGTAATTCGCGCCTTCAAATCCGGTGTCAGAGATCGCTATACTACTCAGGAATTGGCGACAAGACGCATCACAACTACTCGGAGATTGTTCGAAATTGTTGAGCGATGCGCCCACGCAGATGATGCGCTAAGACGCAAGAATGATAAGCCAAAGACCGGGGGAGAGAAGAAACCAGCCACGGACGCACCTGAGTCAAGCAAGAAGAAAAATCACAAAAATGGGAAAAGGAAAGCTCAAGCGGAAGACCTCGCAGCAGAATACGCGAACCCTCCCAAGCGCCCAGACCCACAGAGTAGCGACACAAAGAAAGCATGGTGCCCCATACATAAGATGGACAGACATTCTTTGGAAGATTGCCTTGATGCGGAGGCGGCTCCCCAGGAATCGGATTCAGCATATCCAGACTTTGACCTCCACGTTTCACACATCTTCGGAGGTTCCACAACGTACTCCTCGAAGCGAGAGTACAAGAAAGTGGAACGCGAAAAGATAGAGTTCTCGGAAGAAGACCACCCCAAGACCGCCATCATCCCAGGACGATATCCGATCGTGGTCGAACCCACTATTCGGAACATCAAGGTCGCGCGGGTTCTCATCGATGGTGGCAGCTCAATCAACCTTCTTTTCGCCAGCACTTTGGACGCGATGGGAATTCCACAAAGCAAGTTGACACCAACCGATCAACCCTTTCATGGAATCACTCCCCAATCCTCGTCCAGACCATTGGGTAAGATTACGTTGCCTGTGACTTTCGGCCAAGCTAACAACTTCCGAACGGAGCAAATCACCTTTGATGTCGCTGAATTCGATACAGCTTACAACGCCATCATCGGGAGAACTGCACTTGCGAAGTTTATGGCCGCATCTCACTACGCGTATCAAGTGCTCAAGATGCCGGGACCGAAGGGAACAATCACTATTCAAGGGAACGCAAAGCTGGCGGTGCAATGCGACAAACGGAGCCTCGACATGGTCGAGCAAACGCCCAGCCCATCCGCCACGACTGAGCCACCCAAGAAACTCTTCGACATGCCGGGGGTCCCCAGGGAGGTGATTGAGCACAAACTCATGGTGCGACCCGATGCCAAGCCAGTAAAGCAAAGACTGCAGAGATTTGCACCAGACCGAAAACAAGCCATACGAGAAGAACTCGACAAACTTCTCAAAGCTGGCTTCATCAGAGAAGTACTTCATCCAGAGTGGCTAGCCAATCCAGTCATGGTGCGGAAGGCCAACGGGAAATGGAGAATGTGCGTCGACTTCACCGACCTCAACAAGGCGTGTCCCAAGGATCACTTCCCTCTCCCTCGAATAGATCAACTGGTGGACTCAACAGCCGGCTGTGAGCTGTTGAGTTTTCTCGACGCTTATTCAGGCTACCACCAAATCAGCATAGCAAAAGAGGACAAAGAGAAGACATCATTCATCACGCCATTCGGGGTATTTTGCTATGTCAAGATGCCGTTTGGACTGATAACTGCAGGGAATACTTTCCAGCGCACGGTCCAGGGCGCACTTAGCGACCAGCTCGGCAACAATGTTGAGGCATACGTCGACGACATCGTCGTCAAGACCAAGACAAGCGACTCATTGATTGACGACCTGCGGGAAATAGAAGTGCACGTTCGGAGTACCGTCGGAGGAATAGAAGCAAATCCCGAGAAGATCAAGGCAATCGAGAACATGAAGTCGCCCACAAGACTCAAGGAAGTACAAAATCTAACTGGATGCATGGCAGCACTGAGCAGATTCGTCGCTAGGATGGGAGAACGAGGGCAACCTTTCTTCGCTCTGCTAAAGAAACAAGACAAATTTGTATGGACATAG
More
|
|||||||
| Protein seq | MSSSFVDNSVNINLNQVFPASTMLVWTQVDEIVFPVYTTMPISAGPSMTGNENAVATNQDDSLSKDPPAEAENGTSTTSELEKDSNAAKPCRPDMNREPTKMTSEATKSWCPIHKTRKHTLQACWVFLNVRAEIRACKERGIQRISPTRDVYCPIHKTKNHDLSSCKVFLSAMKAPSPKVQQSHIPIRDKDKEQGAMPTSDQFVGVIDIDPHEPSVLHLLVDYGSSTTSAPREVLAIDDVGTSARTNAEAENQLATLAQHIRAVNAILRETPYDPVLNDDLARWTERLRESVTNLSNAFGEAAAAAHPEQPPTGDVNGEDPEWRESPHRATPPPRGTGDLRDHLNGRREARRTRDNENHSRRHVSSQRHDNEDRGDRSNEDRDRDNRHHRHDHNDRERRVPAGDDDRTRDPGRHPHNRTPESSDPSSSSSSSSSSSSDKHPRRTHDRRQPTVPSVGCRAFSRSLRDVRWPERFRPGAIEKYDGSTDPEEFLQVYSTVLYAAGADDNALANYLPTALKGSARSWLMHLPPYSISSWADLWQQFVANFQGNYKRHAIEDDLHALTQNSGESLREYVRHFNECRNTIPEITNASVIRAFKSGVRDRYTTQELATRRITTTRRLFEIVERCAHADDALRRKNDKPKTGGEKKPATDAPESSKKKNHKNGKRKAQAEDLAAEYANPPKRPDPQSSDTKKAWCPIHKMDRHSLEDCLDAEAAPQESDSAYPDFDLHVSHIFGGSTTYSSKREYKKVEREKIEFSEEDHPKTAIIPGRYPIVVEPTIRNIKVARVLIDGGSSINLLFASTLDAMGIPQSKLTPTDQPFHGITPQSSSRPLGKITLPVTFGQANNFRTEQITFDVAEFDTAYNAIIGRTALAKFMAASHYAYQVLKMPGPKGTITIQGNAKLAVQCDKRSLDMVEQTPSPSATTEPPKKLFDMPGVPREVIEHKLMVRPDAKPVKQRLQRFAPDRKQAIREELDKLLKAGFIREVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAGCELLSFLDAYSGYHQISIAKEDKEKTSFITPFGVFCYVKMPFGLITAGNTFQRTVQGALSDQLGNNVEAYVDDIVVKTKTSDSLIDDLREIEVHVRSTVGGIEANPEKIKAIENMKSPTRLKEVQNLTGCMAALSRFVARMGERGQPFFALLKKQDKFVWT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.0372525 | 3.992998 | 0.655439 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g045169A | SBH | 1.407460 | 1.039893 | 2.375470 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g40370 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0022240 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022130 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0402400 | RBH | 0.3491325 | 4.8224315 | 0.0612725 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0308900 | SBH | 0.020287 | 0.0122975 | 0.017547 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021510 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
