Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0402400 | OGI:08072550 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:27081782-27083440 | ||||||||
| Gene Symbol | JMJ717 | ||||||||||
| DNA seq | TCAGTAGGGCGGGAGATGCATCAGCCATGAACGTGCAGAGCCTTTTAACGTAGTTGGCAAATAATTCGCCAATGCGTTATCGTCTGCTCCGGCAGCGTAGAGTACTGTGGAGTAGACTTGAAGGAACTCTTCTGGGTCGGTGCTCCCATCGTACTTTTCTATTGCTCCAAGTCGGAATCTCTCAGGCCATCGGACATCACGCAGGGAACGACTGAAAGCTCTACACCTAGCGCTGGGGACGGTGGGTTGTCGGCGATCGTGTGTCCTTCGTGGATGTCTGTCTGATGATGAAGAAGACGAGGATGATGACGATGATGATGGGTCGCTCGGTTCCGGCGTACGGTTACGAGGATGTCGGCCTGGATCTCGAGAGTCCTGTCGTTGTCTCCCGCTGTTGTCTCGGCGACGGTCTCCATCATCGTCGTCATTATGGCGACGTCCTCGACTAGTATCACCTGGCACCCGCCGTTCGCGATCATTGTGATCGTGGCGGTGGTGGCGGTTATCATAGTCTCGGTCTTCGTTTGAGCGGTCTCCTCGATCTTCGTTATCATGGCGCCGTGAAGAGACATGACGCCGGGAACGATTCTCGTTGTCTCGTGTGCGTCGTGCCTCTCGGCGGCCGTTGAGGTGATCTCGGAGATCGCCAGTGCCGCCAGGTGGAGGGGTAGCTCGATGAGGCGATTCCCTCCGTTCAGGGTCTTCACCATTGGCATCGCCAGTTGGTGGCTGCTCCGGGTGCGCTGCGGCAGCGGCCTCTCCGAACGCGTTGCTGAGGTTGGTCACTGATTCCCGTAGTCGTTCTGTCCAACGTGCGAGATCATCGTTCAGAACAGGATCGTAGGGGGTTTTCCTCAGTATAGCGTTGACGGCTCTGATGTGCTGGGCTGGAGTGGCCAATTGATTCTCCGCTTCTGCATTGGTGCGCGCTGACGTGCCGACATCATCGATAGCCAATACCTCCCGCGGCGCGCTCGTTCTCGATGATCCATAGTCTACGAGAAGGTGCAAGACTGATGGTTCGTGGGGATCGATATCGATTACCCCAACAAATCGATCTGAGGTTGGCATCGCTCCTTGTTCCTTGTCTTTATCCCTGATGGGGATGTGTGACTGTTGGACTTTAGGAGATGGCGCTTTCATGGCGCTGAGAAAGACCTTGCAGCTGGAGAGGTCGTGATTCTTTGTCTTGTGAATAGGATAATAGACATCACGAGTTGGAGAAATACGCTGAATTCCACGCTCTTTGCAGGCGCGAATTTCAGCGCGGACGTTGAGAAAAACCCAGCAGGCTTGCAAAGTGTGTTTCCTGGTTTTGTGGATAGGACACCAGGACTTTGTCGCTTCGGAAGTCATCTTCATCGGCTCACGGTTCATGTCGGGACAACAAGGTTTGGCCGCATTAGAATCCTTCTCGAGCTCGGATGTCGTCGATGTTCCGTTCTCTGCCTCGGCGGGAGGATCTTTCGACAAGGAGTCGTCTTGGTTTGTAGCCACTGCGTTCTTGTTTCCAGTCATTGATGGACCGGCTGAGATCGGTATTGTGGTGTAAACCGGGAAGACGATTTCGTCGACTTGAGTCCACACCAGCATTGTTGAAGCAGGGAATACTTGGTTGAGGTTGGTGTTGACGCTGTTGTCGACGAAGCTGGATGACAT
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| CDS seq | ATGTCATCCAGCTTCGTCGACAACAGCGTCAACACCAACCTCAACCAAGTATTCCCTGCTTCAACAATGCTGGTGTGGACTCAAGTCGACGAAATCGTCTTCCCGGTTTACACCACAATACCGATCTCAGCCGGTCCATCAATGACTGGAAACAAGAACGCAGTGGCTACAAACCAAGACGACTCCTTGTCGAAAGATCCTCCCGCCGAGGCAGAGAACGGAACATCGACGACATCCGAGCTCGAGAAGGATTCTAATGCGGCCAAACCTTGTTGTCCCGACATGAACCGTGAGCCGATGAAGATGACTTCCGAAGCGACAAAGTCCTGGTGTCCTATCCACAAAACCAGGAAACACACTTTGCAAGCCTGCTGGGTTTTTCTCAACGTCCGCGCTGAAATTCGCGCCTGCAAAGAGCGTGGAATTCAGCGTATTTCTCCAACTCGTGATGTCTATTATCCTATTCACAAGACAAAGAATCACGACCTCTCCAGCTGCAAGGTCTTTCTCAGCGCCATGAAAGCGCCATCTCCTAAAGTCCAACAGTCACACATCCCCATCAGGGATAAAGACAAGGAACAAGGAGCGATGCCAACCTCAGATCGATTTGTTGGGGTAATCGATATCGATCCCCACGAACCATCAGTCTTGCACCTTCTCGTAGACTATGGATCATCGAGAACGAGCGCGCCGCGGGAGGTATTGGCTATCGATGATGTCGGCACGTCAGCGCGCACCAATGCAGAAGCGGAGAATCAATTGGCCACTCCAGCCCAGCACATCAGAGCCGTCAACGCTATACTGAGGAAAACCCCCTACGATCCTGTTCTGAACGATGATCTCGCACGTTGGACAGAACGACTACGGGAATCAGTGACCAACCTCAGCAACGCGTTCGGAGAGGCCGCTGCCGCAGCGCACCCGGAGCAGCCACCAACTGGCGATGCCAATGGTGAAGACCCTGAACGGAGGGAATCGCCTCATCGAGCTACCCCTCCACCTGGCGGCACTGGCGATCTCCGAGATCACCTCAACGGCCGCCGAGAGGCACGACGCACACGAGACAACGAGAATCGTTCCCGGCGTCATGTCTCTTCACGGCGCCATGATAACGAAGATCGAGGAGACCGCTCAAACGAAGACCGAGACTATGATAACCGCCACCACCGCCACGATCACAATGATCGCGAACGGCGGGTGCCAGGTGATACTAGTCGAGGACGTCGCCATAATGACGACGATGATGGAGACCGTCGCCGAGACAACAGCGGGAGACAACGACAGGACTCTCGAGATCCAGGCCGACATCCTCGTAACCGTACGCCGGAACCGAGCGACCCATCATCATCGTCATCATCCTCGTCTTCTTCATCATCAGACAGACATCCACGAAGGACACACGATCGCCGACAACCCACCGTCCCCAGCGCTAGGTGTAGAGCTTTCAGTCGTTCCCTGCGTGATGTCCGATGGCCTGAGAGATTCCGACTTGGAGCAATAGAAAAGTACGATGGGAGCACCGACCCAGAAGAGTTCCTTCAAGTCTACTCCACAGTACTCTACGCTGCCGGAGCAGACGATAACGCATTGGCGAATTATTTGCCAACTACGTTAAAAGGCTCTGCACGTTCATGGCTGATGCATCTCCCGCCCTACTGA
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| Protein seq | MSSSFVDNSVNTNLNQVFPASTMLVWTQVDEIVFPVYTTIPISAGPSMTGNKNAVATNQDDSLSKDPPAEAENGTSTTSELEKDSNAAKPCCPDMNREPMKMTSEATKSWCPIHKTRKHTLQACWVFLNVRAEIRACKERGIQRISPTRDVYYPIHKTKNHDLSSCKVFLSAMKAPSPKVQQSHIPIRDKDKEQGAMPTSDRFVGVIDIDPHEPSVLHLLVDYGSSRTSAPREVLAIDDVGTSARTNAEAENQLATPAQHIRAVNAILRKTPYDPVLNDDLARWTERLRESVTNLSNAFGEAAAAAHPEQPPTGDANGEDPERRESPHRATPPPGGTGDLRDHLNGRREARRTRDNENRSRRHVSSRRHDNEDRGDRSNEDRDYDNRHHRHDHNDRERRVPGDTSRGRRHNDDDDGDRRRDNSGRQRQDSRDPGRHPRNRTPEPSDPSSSSSSSSSSSSDRHPRRTHDRRQPTVPSARCRAFSRSLRDVRWPERFRLGAIEKYDGSTDPEEFLQVYSTVLYAAGADDNALANYLPTTLKGSARSWLMHLPPY |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0402400 | OsMH63_08T0402400.1 | Chr08 | 27081782 | 27083440 | - | maker | ||
| CDS seq | ATGTCATCCAGCTTCGTCGACAACAGCGTCAACACCAACCTCAACCAAGTATTCCCTGCTTCAACAATGCTGGTGTGGACTCAAGTCGACGAAATCGTCTTCCCGGTTTACACCACAATACCGATCTCAGCCGGTCCATCAATGACTGGAAACAAGAACGCAGTGGCTACAAACCAAGACGACTCCTTGTCGAAAGATCCTCCCGCCGAGGCAGAGAACGGAACATCGACGACATCCGAGCTCGAGAAGGATTCTAATGCGGCCAAACCTTGTTGTCCCGACATGAACCGTGAGCCGATGAAGATGACTTCCGAAGCGACAAAGTCCTGGTGTCCTATCCACAAAACCAGGAAACACACTTTGCAAGCCTGCTGGGTTTTTCTCAACGTCCGCGCTGAAATTCGCGCCTGCAAAGAGCGTGGAATTCAGCGTATTTCTCCAACTCGTGATGTCTATTATCCTATTCACAAGACAAAGAATCACGACCTCTCCAGCTGCAAGGTCTTTCTCAGCGCCATGAAAGCGCCATCTCCTAAAGTCCAACAGTCACACATCCCCATCAGGGATAAAGACAAGGAACAAGGAGCGATGCCAACCTCAGATCGATTTGTTGGGGTAATCGATATCGATCCCCACGAACCATCAGTCTTGCACCTTCTCGTAGACTATGGATCATCGAGAACGAGCGCGCCGCGGGAGGTATTGGCTATCGATGATGTCGGCACGTCAGCGCGCACCAATGCAGAAGCGGAGAATCAATTGGCCACTCCAGCCCAGCACATCAGAGCCGTCAACGCTATACTGAGGAAAACCCCCTACGATCCTGTTCTGAACGATGATCTCGCACGTTGGACAGAACGACTACGGGAATCAGTGACCAACCTCAGCAACGCGTTCGGAGAGGCCGCTGCCGCAGCGCACCCGGAGCAGCCACCAACTGGCGATGCCAATGGTGAAGACCCTGAACGGAGGGAATCGCCTCATCGAGCTACCCCTCCACCTGGCGGCACTGGCGATCTCCGAGATCACCTCAACGGCCGCCGAGAGGCACGACGCACACGAGACAACGAGAATCGTTCCCGGCGTCATGTCTCTTCACGGCGCCATGATAACGAAGATCGAGGAGACCGCTCAAACGAAGACCGAGACTATGATAACCGCCACCACCGCCACGATCACAATGATCGCGAACGGCGGGTGCCAGGTGATACTAGTCGAGGACGTCGCCATAATGACGACGATGATGGAGACCGTCGCCGAGACAACAGCGGGAGACAACGACAGGACTCTCGAGATCCAGGCCGACATCCTCGTAACCGTACGCCGGAACCGAGCGACCCATCATCATCGTCATCATCCTCGTCTTCTTCATCATCAGACAGACATCCACGAAGGACACACGATCGCCGACAACCCACCGTCCCCAGCGCTAGGTGTAGAGCTTTCAGTCGTTCCCTGCGTGATGTCCGATGGCCTGAGAGATTCCGACTTGGAGCAATAGAAAAGTACGATGGGAGCACCGACCCAGAAGAGTTCCTTCAAGTCTACTCCACAGTACTCTACGCTGCCGGAGCAGACGATAACGCATTGGCGAATTATTTGCCAACTACGTTAAAAGGCTCTGCACGTTCATGGCTGATGCATCTCCCGCCCTACTGA
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| Protein seq | MSSSFVDNSVNTNLNQVFPASTMLVWTQVDEIVFPVYTTIPISAGPSMTGNKNAVATNQDDSLSKDPPAEAENGTSTTSELEKDSNAAKPCCPDMNREPMKMTSEATKSWCPIHKTRKHTLQACWVFLNVRAEIRACKERGIQRISPTRDVYYPIHKTKNHDLSSCKVFLSAMKAPSPKVQQSHIPIRDKDKEQGAMPTSDRFVGVIDIDPHEPSVLHLLVDYGSSRTSAPREVLAIDDVGTSARTNAEAENQLATPAQHIRAVNAILRKTPYDPVLNDDLARWTERLRESVTNLSNAFGEAAAAAHPEQPPTGDANGEDPERRESPHRATPPPGGTGDLRDHLNGRREARRTRDNENRSRRHVSSRRHDNEDRGDRSNEDRDYDNRHHRHDHNDRERRVPGDTSRGRRHNDDDDGDRRRDNSGRQRQDSRDPGRHPRNRTPEPSDPSSSSSSSSSSSSDRHPRRTHDRRQPTVPSARCRAFSRSLRDVRWPERFRLGAIEKYDGSTDPEEFLQVYSTVLYAAGADDNALANYLPTTLKGSARSWLMHLPPY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.3491325 | 4.8224315 | 0.0612725 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39810 | RBH | 2.725888 | 2.565107 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0022240 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022130 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0295700 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0422400 | RBH | 1.0372525 | 3.992998 | 0.655439 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021510 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
