Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_08G0028000 OGI:08004570 | 12/16 Zhenshan 97 | ZS97RS3 | HZAU Chr08:1781186-1785228
Gene Symbol -
DNA seq

TTAATCACAATCGGAATCAATGGTTGACACAGACTCCCTCATGTCCTCTTGAACTTCATCAAGGCATGTCCAGAAACTTGCATCTCCATTATCACCTACAACCAAGCAAATGTACATTAGAAGCAGTCTACTAACATGATAATTATACATATGACACAATTGTACAAACTTATTATACCTTCAAGTTGAGAACGTAACCAATCTTGGCTACACATCAAGGCCTCCAACAACTTTGGAGTGAGACGGCTGCGATGTTCACTTAAAACCCTTCCACTAGTACTAAAAGCAGACTCCGAAGCAACTGAAGTTACTGGAATAGCCAAGATATCACGAGCAACCATCCTTAGTGTTGGATAGCTAGTGCCAGCAACCTTCCACCAACTAAGTATATCAAATTCCTCACTTTCATCATCATGAGGAAGTGTTTCTTCTTCCAAATAGCGATCCAACTCATTTTTTGCTCTTGCAGCAGAAGAAAATTTCTTGGTGGCATTGAGAGAATGAAATATTGACATAACCTCTACAGACTTGATTGAAGAGCTAGCAGTACCAGAACCAGAAGAACTACCCACACCCTCTTGATCAAGTATAACTTGGTAGCTATTCATCAAGTCAGTCAATAACTTGTATGCATCATTAAGATAGGTTTCACAATTTCCTTGACCAAACAGTGCAATGTAGCAAGCCCGTAACATTGTCATTTTATACCGTGGATCAAGAACAACAGCAGCAGCTAAAACACCATGAATATCCAACCAATACTTATCATACTTCTTTATCATGGCTTCAGACATTTCCCTAATCAACTCATCTTCAGATTGTTGCCAAGTTCTAATTTTAAGCTTAATTTCACATATTTTCGGGAAGCATAAATTAGCTGTGACATACTTAGTTCCAGAAAATAACTCAGTGAGGGAGGCAAATATTTGCAATCTATCACAAACAGCTTGGGCAAAGTCCCAATCACTACCAAGTGGAGCAGTATACTTCTTATGTACTTTCTCTAAGCGATCAAAAACTTTCCTATATGGTATGGCAACAATAAGCATTTCATAGGTGGAATTCCATCTAGTTTTGCAATCAAGACACAACTTTTTAGTTAATTCAACCTTTTCATGTTGAGCTGCTTTCTCAAATTTCTCATACCTCTTTGGTGTAGCAAGCCAATAAGCAACACTGTCCCGGATGGCAACAATTTGATCACCAATCACATCCATCCCATCTTTGACAATCAGATTAAGGATGTGTGCACAACATCTCATATGCAACATCTTCCCTTCTAGCAAAAGATTACGTACCCCAATCTTGGTGGTCATTTTGTTGACAAGACTATCATTTGTGGTACAATTGTCAAGTGTCATTGCTGATATCCTACAATCAATATCCCAGCTCTGGAGGCAGTCATACAGAACATCGGTAATAGCAACAGCCGTATGAGGACATGGCACATATATAAACCTACTCAGGTAATATATCATTTTAGCAAGTTAATTAAAAGAAAACTATGCATAAACTACGGCAAATACAAAGCAAGTGATGGAAAATAACCTCAATATGCAACTTCTAAGCCTCCAGGAATCATCAATAAAATGTCCAGTGACTGCCATATAACCCCTTTTTTGGTTTTGGGCTGTCCAAAGATCAGTTGTAATAGCAACACGACAATTCATCTTTTGTATGAAAAAACGACCTTTGCTTTTCTCCCTCTCATAATATGTCATAATATCTTTTCTAATTGTGTTCCGGGTGATCATTTTGAACAAGGGTTGCAATGCACTCACAAATTTTCGGAAGCCATAATGATCAACAATGGACAGAGGGTACTCATGCAATACAATCATGCAAAAAAGGGCTTTCCTAGCTACTTCCTGATCAAAGACATAGTTTTCCACAGCTACATGCCCTTGTTCATTTGTTCCAAATCTCAGAGATGACTGCACTTTCCCTCCCTCCCTCTTTTTATAGACGCATATTTTTAAATGTGCATGCAAATGCTTAGTACCATTTCTAGTTTCACCTGAAAGAAGCTTGCCGCACCACGAGCACTTTGCCTTATCAACCCCTTTGACCTTCACTCTTGTGAACTCATCCCAAACAACAGAAGTGAGTTTCCTCTTTGTACCACGCTTGTCAGTCAAAGTTTCTTCTTCTTCTTCCTGTTCAGCATGTTCTGCAGATGCATCCACACCAACAGGAGGAGTAGTTTGTGAGGCTTGCTCACAGTCAGCCTGGCTGCTGCTGACCGGAGGAGTAGCACGCCGGCTGCTACTCGCCGGAGTATTTGTATGCTTGTTGCTGCTTGCTGGAGTTGCCATTAGTTCAAATCACTAGCAATCAAATCACAAATAATAGATCAAAATAAGGAGAGACTAGATCGAAAAAAATAGATACTAGATCTAGAGGAGAGAAGGGGAATAGAAGGGGAAAAGAAGGGGAATACCTTGCAGAGGACCGAAGGCGGCGGCGACCGGAGACGGCGGCGACCGGGGGGAGGAGGGACCTCCACGGCTCGGCGCAGTGGAGGCAGGAAGCAGCGGCGACGGCGGCCGCAAACGGAGGGGGCCTGGATGGAGGACGACCGGCCGGAGGGGTGCTCGGCGCAGAGGTGAAGCCCCTCCCGTCCCCTTCTGCGGCCGTGAGGCAAAGCCCCTCCCGTCCTCTCCCGTCCCCTCACGGCGATGACTGCCCGGCGGCCGGCGGCGGGGGTGGGGGCGCCGGCGGAGACCGAGGCGGCTGGGAGGAGGAGTCGAGGCTGGGAGGCGGCTGGGATTGGGAGTGGGAGGAGAGGCGGCTGGGAGTGGGAGTGGGAGGAGGCTAGAGGGAGAGAAACCCTAAAGATTTTAGACGGTGGTTTTTATACTAAGTTGACTGAGGGCCCACATGTCAGTTGGTTTCGCGGGTAAACGGGCGAAGCGGGCATGGGTAGTGACTACCCATGCCCGTGCCCGTGTGCCCGTTGGGTACATGTTTTGACCCAAAAAAATACCCATGGGTACTAAATGGAGAACAAACCCAGCTCTATTAGGGTTTTTACCCGCGGGTAAACGGGTAAATGGGCAAAACTGCCATCCCTAATTACATAGGTAATAAAAAGATAGAAGAAGAAAATTAGAGACACCCTTCTAACTTATCTATTATAGAAGTTAATTCTAATATTAATTTATACCTAGTAGTCGACTCTACTACTAAACTTGCTCTTAAAAAAATTATTTATTATTTTAGAGCAATTTCTATTTTTTTTAGATAATGGAATATAATATCCTGGCCTTTGCTAAAAAAGAATTACAACCAATTATAACAAAGATCCACTCTAGAAGAGAGTCTAGTTCAAGACAAATTGAACACACCAAACAAGAGAAGAGAGGACCCAAACTGAGAAAAGCAAAACAAAATGTGGAGCTAGAAGGCCTCATCAAAGCCTAGCACTGAAGTTCGAAGCCAATGCATACACCATTGATAATAACCTTGCACGAAGAGGTTTCTCCAAAACGGTGCCCCCAAGGAGGATGCGACGTGGATCGCCGCCACCGCTCGTTCGGAACCGAAGCAAGGTTTTCACCCGGAGAATATGGTAGGGAAAGGAGAGGGGTATGCTAAAACAACGCCTCCAAGGAGGGGAACGACGCCAAACGGCGTCGCCGTTGTCAGCTGGCCAAATGGCTCGGCAAGGCTTTTGCCCGTGATTCCCTGTCCAAACCCACACCACCAATCCGCACAAGAAGGATCATCGTCGGTCAACAACATTGTCCCTTCAGCGATTCGGCCAAGGCCACTGCCCACAGTTCTTCTCGCCGTCGACGGCACGCCCGCACCCGGACTCCTCCTTCCCCGCCTCCACATACCGCCGCCGCCGACGACGCACCGACAGCCGGATGATGGCCTTCAACCATCGCCGCCATAGGTACCACCGTCGACAGCCGCCATCGCCATCGCCACTGCCATAGCCACCACCGTCGCCAGCCGCCACCGTCATCCACCATCGCCACCGCCACGGCCACCACCACGGCCAGCCCCGTCCAGCCGCCACCGTCAGCCGCCACCAT

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CDS seq

ATGGTGGCGGCTGACGGTGGCGGCTGGACGGGGCTGGCCGTGGTGGTGGCCGTGGCGGTGGCGATGGTGGATGACGGTGGCGGCTGGCGACGGTGGTGGCTATGGCAGTGGCGATGGCGATGGCGGCTGTCGACGGTGGTACCTATGGCGGCGATGGTTGAAGGCCATCATCCGGCTGTCGCAAGCAGCAACAAGCATACAAATACTCCGGCGAGTAGCAGCCGGCGTGCTACTCCTCCGGTCAGCAGCAGCCAGGCTGACTGTGAGCAAGCCTCACAAACTACTCCTCCTGTTGGTGTGGATGCATCTGCAGAACATGCTGAACAGGAAGAAGAAGAAGAAACTTTGACTGACAAGCGTGGTACAAAGAGGAAACTCACTTCTGTTGTTTGGGATGAGTTCACAAGAGTGAAGGTCAAAGGGGTTGATAAGGCAAAGTGCTCGTGGTGCGGCAAGCTTCTTTCAGGTGAAACTAGAAATGGTACTAAGCATTTGCATGCACATTTAAAAATATGCGTCTATAAAAAGAGGGAGGGAGGGAAAGTGCAGTCATCTCTGAGATTTGGAACAAATGAACAAGGGCATGTAGCTGTGGAAAACTATGTCTTTGATCAGGAAGTAGCTAGGAAAGCCCTTTTTTGCATGATTGTATTGCATGAGTACCCTCTGTCCATTGTTGATCATTATGGCTTCCGAAAATTTGTGAGTGCATTGCAACCCTTGTTCAAAATGATCACCCGGAACACAATTAGAAAAGATATTATGACATATTATGAGAGGGAGAAAAGCAAAGGTCGTTTTTTCATACAAAAGATGAATTGTCGTGTTGCTATTACAACTGATCTTTGGACAGCCCAAAACCAAAAAAGGGGTTATATGGCAGTCACTGGACATTTTATTGATGATTCCTGGAGGCTTAGAAGTTGCATATTGAGGTTTATATATGTGCCATGTCCTCATACGGCTGTTGCTATTACCGATGTTCTGTATGACTGCCTCCAGAGCTGGGATATTGATTGTAGGATATCAGCAATGACACTTGACAATTGTACCACAAATGATAGTCTTGTCAACAAAATGACCACCAAGATTGGGGTACGTAATCTTTTGCTAGAAGGGAAGATGTTGCATATGAGATGTTGTGCACACATCCTTAATCTGATTGTCAAAGATGGGATGGATGTGATTGGTGATCAAATTGTTGCCATCCGGGACAGTGTTGCTTATTGGCTTGCTACACCAAAGAGGTATGAGAAATTTGAGAAAGCAGCTCAACATGAAAAGGTTGAATTAACTAAAAAGTTGTGTCTTGATTGCAAAACTAGATGGAATTCCACCTATGAAATGCTTATTGTTGCCATACCATATAGGAAAGTTTTTGATCGCTTAGAGAAAGTACATAAGAAGTATACTGCTCCACTTGGTAGTGATTGGGACTTTGCCCAAGCTGTTTGTGATAGATTGCAAATATTTGCCTCCCTCACTGAGTTATTTTCTGGAACTAAGTATGTCACAGCTAATTTATGCTTCCCGAAAATATGTGAAATTAAGCTTAAAATTAGAACTTGGCAACAATCTGAAGATGAGTTGATTAGGGAAATGTCTGAAGCCATGATAAAGAAGTATGATAAGTATTGGTTGGATATTCATGGTGTTTTAGCTGCTGCTGTTGTTCTTGATCCACGGTATAAAATGACAATGTTACGGGCTTGCTACATTGCACTGTTTGGTCAAGGAAATTGTGAAACCTATCTTAATGATGCATACAAGTTATTGACTGACTTGATGAATAGCTACCAAGTTATACTTGATCAAGAGGGTGTGGGTAGTTCTTCTGGTTCTGGTACTGCTAGCTCTTCAATCAAGTCTGTAGAGGTTATGTCAATATTTCATTCTCTCAATGCCACCAAGAAATTTTCTTCTGCTGCAAGAGCAAAAAATGAGTTGGATCGCTATTTGGAAGAAGAAACACTTCCTCATGATGATGAAAGTGAGGAATTTGATATACTTAGTTGGTGGAAGGTTGCTGGCACTAGCTATCCAACACTAAGGATGGTTGCTCGTGATATCTTGGCTATTCCAGTAACTTCAGTTGCTTCGGAGTCTGCTTTTAGTACTAGTGGAAGGGTTTTAAGTGAACATCGCAGCCGTCTCACTCCAAAGTTGTTGGAGGCCTTGATGTGTAGCCAAGATTGGTTACGTTCTCAACTTGAAGGTGATAATGGAGATGCAAGTTTCTGGACATGCCTTGATGAAGTTCAAGAGGACATGAGGGAGTCTGTGTCAACCATTGATTCCGATTGTGATTAA

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Protein seq

MVAADGGGWTGLAVVVAVAVAMVDDGGGWRRWWLWQWRWRWRLSTVVPMAAMVEGHHPAVASSNKHTNTPASSSRRATPPVSSSQADCEQASQTTPPVGVDASAEHAEQEEEEETLTDKRGTKRKLTSVVWDEFTRVKVKGVDKAKCSWCGKLLSGETRNGTKHLHAHLKICVYKKREGGKVQSSLRFGTNEQGHVAVENYVFDQEVARKALFCMIVLHEYPLSIVDHYGFRKFVSALQPLFKMITRNTIRKDIMTYYEREKSKGRFFIQKMNCRVAITTDLWTAQNQKRGYMAVTGHFIDDSWRLRSCILRFIYVPCPHTAVAITDVLYDCLQSWDIDCRISAMTLDNCTTNDSLVNKMTTKIGVRNLLLEGKMLHMRCCAHILNLIVKDGMDVIGDQIVAIRDSVAYWLATPKRYEKFEKAAQHEKVELTKKLCLDCKTRWNSTYEMLIVAIPYRKVFDRLEKVHKKYTAPLGSDWDFAQAVCDRLQIFASLTELFSGTKYVTANLCFPKICEIKLKIRTWQQSEDELIREMSEAMIKKYDKYWLDIHGVLAAAVVLDPRYKMTMLRACYIALFGQGNCETYLNDAYKLLTDLMNSYQVILDQEGVGSSSGSGTASSSIKSVEVMSIFHSLNATKKFSSAARAKNELDRYLEEETLPHDDESEEFDILSWWKVAGTSYPTLRMVARDILAIPVTSVASESAFSTSGRVLSEHRSRLTPKLLEALMCSQDWLRSQLEGDNGDASFWTCLDEVQEDMRESVSTIDSDCD

Function Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot:Q6AVI0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_08G0028000 OsZS97_08T0028000.1 Chr08 1781186 1785228 - makerRMon
CDS seq

ATGGTGGCGGCTGACGGTGGCGGCTGGACGGGGCTGGCCGTGGTGGTGGCCGTGGCGGTGGCGATGGTGGATGACGGTGGCGGCTGGCGACGGTGGTGGCTATGGCAGTGGCGATGGCGATGGCGGCTGTCGACGGTGGTACCTATGGCGGCGATGGTTGAAGGCCATCATCCGGCTGTCGCAAGCAGCAACAAGCATACAAATACTCCGGCGAGTAGCAGCCGGCGTGCTACTCCTCCGGTCAGCAGCAGCCAGGCTGACTGTGAGCAAGCCTCACAAACTACTCCTCCTGTTGGTGTGGATGCATCTGCAGAACATGCTGAACAGGAAGAAGAAGAAGAAACTTTGACTGACAAGCGTGGTACAAAGAGGAAACTCACTTCTGTTGTTTGGGATGAGTTCACAAGAGTGAAGGTCAAAGGGGTTGATAAGGCAAAGTGCTCGTGGTGCGGCAAGCTTCTTTCAGGTGAAACTAGAAATGGTACTAAGCATTTGCATGCACATTTAAAAATATGCGTCTATAAAAAGAGGGAGGGAGGGAAAGTGCAGTCATCTCTGAGATTTGGAACAAATGAACAAGGGCATGTAGCTGTGGAAAACTATGTCTTTGATCAGGAAGTAGCTAGGAAAGCCCTTTTTTGCATGATTGTATTGCATGAGTACCCTCTGTCCATTGTTGATCATTATGGCTTCCGAAAATTTGTGAGTGCATTGCAACCCTTGTTCAAAATGATCACCCGGAACACAATTAGAAAAGATATTATGACATATTATGAGAGGGAGAAAAGCAAAGGTCGTTTTTTCATACAAAAGATGAATTGTCGTGTTGCTATTACAACTGATCTTTGGACAGCCCAAAACCAAAAAAGGGGTTATATGGCAGTCACTGGACATTTTATTGATGATTCCTGGAGGCTTAGAAGTTGCATATTGAGGTTTATATATGTGCCATGTCCTCATACGGCTGTTGCTATTACCGATGTTCTGTATGACTGCCTCCAGAGCTGGGATATTGATTGTAGGATATCAGCAATGACACTTGACAATTGTACCACAAATGATAGTCTTGTCAACAAAATGACCACCAAGATTGGGGTACGTAATCTTTTGCTAGAAGGGAAGATGTTGCATATGAGATGTTGTGCACACATCCTTAATCTGATTGTCAAAGATGGGATGGATGTGATTGGTGATCAAATTGTTGCCATCCGGGACAGTGTTGCTTATTGGCTTGCTACACCAAAGAGGTATGAGAAATTTGAGAAAGCAGCTCAACATGAAAAGGTTGAATTAACTAAAAAGTTGTGTCTTGATTGCAAAACTAGATGGAATTCCACCTATGAAATGCTTATTGTTGCCATACCATATAGGAAAGTTTTTGATCGCTTAGAGAAAGTACATAAGAAGTATACTGCTCCACTTGGTAGTGATTGGGACTTTGCCCAAGCTGTTTGTGATAGATTGCAAATATTTGCCTCCCTCACTGAGTTATTTTCTGGAACTAAGTATGTCACAGCTAATTTATGCTTCCCGAAAATATGTGAAATTAAGCTTAAAATTAGAACTTGGCAACAATCTGAAGATGAGTTGATTAGGGAAATGTCTGAAGCCATGATAAAGAAGTATGATAAGTATTGGTTGGATATTCATGGTGTTTTAGCTGCTGCTGTTGTTCTTGATCCACGGTATAAAATGACAATGTTACGGGCTTGCTACATTGCACTGTTTGGTCAAGGAAATTGTGAAACCTATCTTAATGATGCATACAAGTTATTGACTGACTTGATGAATAGCTACCAAGTTATACTTGATCAAGAGGGTGTGGGTAGTTCTTCTGGTTCTGGTACTGCTAGCTCTTCAATCAAGTCTGTAGAGGTTATGTCAATATTTCATTCTCTCAATGCCACCAAGAAATTTTCTTCTGCTGCAAGAGCAAAAAATGAGTTGGATCGCTATTTGGAAGAAGAAACACTTCCTCATGATGATGAAAGTGAGGAATTTGATATACTTAGTTGGTGGAAGGTTGCTGGCACTAGCTATCCAACACTAAGGATGGTTGCTCGTGATATCTTGGCTATTCCAGTAACTTCAGTTGCTTCGGAGTCTGCTTTTAGTACTAGTGGAAGGGTTTTAAGTGAACATCGCAGCCGTCTCACTCCAAAGTTGTTGGAGGCCTTGATGTGTAGCCAAGATTGGTTACGTTCTCAACTTGAAGGTGATAATGGAGATGCAAGTTTCTGGACATGCCTTGATGAAGTTCAAGAGGACATGAGGGAGTCTGTGTCAACCATTGATTCCGATTGTGATTAA

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Protein seq

MVAADGGGWTGLAVVVAVAVAMVDDGGGWRRWWLWQWRWRWRLSTVVPMAAMVEGHHPAVASSNKHTNTPASSSRRATPPVSSSQADCEQASQTTPPVGVDASAEHAEQEEEEETLTDKRGTKRKLTSVVWDEFTRVKVKGVDKAKCSWCGKLLSGETRNGTKHLHAHLKICVYKKREGGKVQSSLRFGTNEQGHVAVENYVFDQEVARKALFCMIVLHEYPLSIVDHYGFRKFVSALQPLFKMITRNTIRKDIMTYYEREKSKGRFFIQKMNCRVAITTDLWTAQNQKRGYMAVTGHFIDDSWRLRSCILRFIYVPCPHTAVAITDVLYDCLQSWDIDCRISAMTLDNCTTNDSLVNKMTTKIGVRNLLLEGKMLHMRCCAHILNLIVKDGMDVIGDQIVAIRDSVAYWLATPKRYEKFEKAAQHEKVELTKKLCLDCKTRWNSTYEMLIVAIPYRKVFDRLEKVHKKYTAPLGSDWDFAQAVCDRLQIFASLTELFSGTKYVTANLCFPKICEIKLKIRTWQQSEDELIREMSEAMIKKYDKYWLDIHGVLAAAVVLDPRYKMTMLRACYIALFGQGNCETYLNDAYKLLTDLMNSYQVILDQEGVGSSSGSGTASSSIKSVEVMSIFHSLNATKKFSSAARAKNELDRYLEEETLPHDDESEEFDILSWWKVAGTSYPTLRMVARDILAIPVTSVASESAFSTSGRVLSEHRSRLTPKLLEALMCSQDWLRSQLEGDNGDASFWTCLDEVQEDMRESVSTIDSDCD

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g08240 SBH 0.556467 0.425427 0.564364
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0001770 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0001640 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0026300 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0001530 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0512200 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0001620 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0001710 SBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0005140 SBH 0.947337 7.223179 6.845451
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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