Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_08g0001710 OGI:08003820 | 7/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr08:1461019-1469080
Gene Symbol WRKY105, OsWRKY105
DNA seq

atggaggcacaacaagagcaaattctgcaggaggggatccgcaacaacaagggaaagaagaagcgatctcgtgcgtggaagacgtttatccgtctcaccggtccaggcgagctggtaagagccgagtgcataaaatgccaccaggtgtacgcggccgactcggtaaaaaacggcactagtaatctgttgaagcacgccaacaaatgcagctgcctggagcaggacggcggaaccatcgcgccggaaagcagatcgtcatgttcgggcgacggcgacgacgacgactcgtcgagctgcgatccagtcctggaagacctcgcccgaatgatcgctttccatggattcgactcgtcgatcctggaggacaaccacttcaagaggttcgtgaaacgcatcaaccctcactttgagctgccctcacgccacggcattgacgagctctgccgccgcatctctctcgaggagaagatgggtttgagttcgcagctactggcatcttctgctaagttcaacttagccgcgggtacagcccggactgttgagggcacggtcgtatacattgcttaccacttcgttgatgatgaatggaatctcatcaagatcatcaaggatgcttacatggttgtgcctcgctttctctaccatggccctctactggacatcatggaggctgacatcaactgcgacgacgaccacgaaatgattatgagtagtaccatggaagaaatttccagctctggtatttcgcataggcttttcagcatggcatggggaatcattgacgatcgcagagaattgaggatgaatcacctaaacgagatattctcgggtacctgtgcggtgaaaagagaacttgtttataccgcctatgtggataatgtgcttcattcgattgctggatgcctcgcagataatctaaattcaagttacatctcatcttgtttgttcactccagtttctgatttaagtttaaatacacaagagcgtgaagagcttcttgcacagctctgtcttcaggacatttcgacttacaacgaacgttggtattccttctattgttcgttggagattcttcacaataaaggaagaggcggctgttccacaagagtgcaagacacctgcatccttaaaggagagcaagaaacagaatctacacgactactacgcaatatttggggtaagatataccaggccattcaaaacatctccgttcccaatcttccaacttcaaatctgtgcctaagagaactttttctcgtgagggaagctttgcaatcagaattgcaaggggcatgtggagataaggcaaatctttacaatgacaacattatattttccggtggcaagggtgttgccgatgttctcggagaggcaaaggacaggttggacatgaacatactcgactcatacttgatatggtccatacctttagtattagacccccgatacaatctcaggtatatagagtccactttcccgggagtttatggttccgaggctccaaagtacatctccggcataaaatcgaaaatttcccagctgtttactgaataccgtaatgatgctgaaaccagctcgaatgctctcgatgggatggatatcaacagtaatgatccacatcaactgcgacaggcatggcaggagtattctcaatatgagtgcaagtcagaacttgaaagttacctggaagacgatcactttcctgatctcaaagatagttttgacattctgaactggtggagggagaaaagcctcgagtacccgattgtggcaaggatggcgaaggacgctctgtccatgcctacatgcagtaagctatcttctcaacaaacctcccaagttaggagcatgattcgcggttattcaattcccatgtcatcaattaaacggtagtatatatcgtgtccgtgaaagtcgaaaagaagtggattactttttataggtaatggaaatggttacaagtctcggcgaatgtaaataagttatgaacaaacatgttccactgcttaattgtacggtatttccccgtaattctcttgtcatgttatgttttctacctatcactgcgtgtgcctctctgtctttgtgatgtactatatattctgttgtatattaaccatgtgtggtactgcttaattttacttcccggtaattctcttatcttgttatattttggacttaccaatatatattacttccctgtaattcacaagactagctaccacatcagtgttgtcagctaggataattggcatatacacacctattcaatcgctgttcgtaagccttccaagcaagtagaacatcttaattataacgtggaacaaagggagtagtgttttatatgttgctaccaccatgtactaaccctctgcagtacactctaatagtcaaatgagtaaattttataaaaccactgatacttggatcaaattatcacaataatacagattttaaggtcatgtatcacaaaactacaaatttaacgtgaaatttctcataaaactacaaatttaggatggagtgtcacaaaataaaggttaagtcactacttcagaaaagcacatacaagtcggcactataagtgtagtgccggaacaattaaaactggcacctatagagctcttcctacctctgcggggtggaaaaatataaaaccgacaatttttagtaacgttggttctaaagaaaaaacctgcaccaatattataagtgccgatttttttaataaaactgtacctacatagggttaaaaagtgccggtttataaaaactggcactttaacatagccaagccgagccaagcgaagagagtgagcgatctcgtccttatcttctgccgcgccgccccccacctcattcactctctctctctcctctcctctccctttttcccctcacctcctcctctttctcctccactggccaccggcagcgtgggaaggccaccaaccacctcctctcaccccttcctaccggccaccgctcctctcgccccttcccactgaccactggcgctcggaggcggccagatccggcgccacccctcctcctctccgtcccgtccccttcccattggcgctcgaggcggtggaatccggcattgtccctccacaccgacactcgagagcggccggatctagtgctgcccctcctcacagcggcgtgacaggcggatctagcactggtttggggagttgatggacgtgtcatatatgatattgcggttcaggaataaatttcaaactcgatgacaaattgagagaactaaagtgaagtattccctataatttatgattactacaaaaaataccggtgtgttgcaatgggtaaatgctattttaattttattgttgttatacggtttagctagggtaaaatattgtgaaaattcacttggattttttttttagaaaatcgtaagctacaattataagtctgtatttcatctcaagttagtatgcgagttttttttaaatagatttcttatataattcctttgtattttcaaaagaaaatgagcttaaaatcgaactcaaatatagatctgtatttctaaaagccaacgaatttaaaaaccaattcaaatatagataacgtaccaaaataccgataaaaacatctttaatttttgtaatactagagataagtattcttaggccgcttgaccaaagaatttgatacggtagaatatgagctcgtagatatactgggccttgtcaactgatagcacagtatttgcttctaagctttgttatgatactgtacacatcttcgcttttaagtctgtgttcagttcatcttcccaacttctaaatcctcgtttttttttaaaaaaaaaagtacaaatgcaggcatccataatgcgtgcatactcatccctacaaaagcgcgcgcatactcatgttaattaacaacggaatttggcatcggatttggaaaagaaggaaggaaatcgaagcggatgtggtgttgaatcaaaccgaacttgaagtcggactacgcattggctgaataccatatcggctgaaacagagtatgaagctgctcgaagttgatgaagctgatggccgatgcagccgatatgacgtgacttgggttcgacatgggtctagattaggataaccgtcattgccaataaaAgatagagctcgattaaagcaattgtatctattaattacgatgttgagtcggtttgttagagttttggtaagagaccgccatatatggtcttgtttatatcttaagtttagaaaggtttgagtcgtgtccataatggactaagtttgtactcggggtataaatatgaacccaatagcactataatacggaagcaactccaatataacttcggcgtatcgccacccttttacttttcatgttttctggcgagttcttcgcaagaggtaacccgtctcaatggcccacgctatcggggctaacatgtcgttttagacgtgttaggctcgatatcgcgagtcattgctatcatgtgtcttagttaatctattcgtagcttatcaatttagctctatcggttgctgctcgctttaagatttatgcttattttggttaaattgtcttgctagattagattagctaagacatctaccatcccgaaaagtgtctaattgcttgatgtctagactgcatgtttcttttcatactttgagatgcaccattcctagtcgtgcttagaaccatgcaaactagcctgcaattaggcataataaggatagtattggagtttcaaccgatcttacctaatatgcatgtgttcatcccttgtttcatgtatattcgctacttacatagatagatcgttttatataagcatatcaagctttagtcagtatcggctagattcatacaccttcatgcttgatttatgtttgatatgtttatatggatcactctgtctatataagtttatactagggtattagctagtgcgttatctctcttgctctaaatactgtcatattggctattcccataatgttgtcttaaatcaatctgttaaactctatagaatagtattacattcgattgggcgtgtttagggtttattattctttgttacatccaatccatagccgatttggtctaacttcatcggctgagaccgtcaacgatatgctattggcctattggccgatcggctatcggtcgactgattttgcttttattctttcttgctgattgcaggatcaaatcagctggcacgctcttgacacactcgaggctagccttggacctgtactggaattaaacaaatctcccagaccgccgtgttttcacatcaacaactcacccctatgaacacgtgtgtgcactttacccctataagtacctccgaaaaattggaccggcatatcttggtattggtaaagtagacgggtgccttgctatcaacgagtacgtatgtcgccttatcactgataaaataattagcctccaaattgttaaacggtgtgtttaaaaaaaatcctaaaattactttagaaaatcatattaatcaattttttaagtttttttagctaatctcgaattcagggcgtgttcccgagcggttagcgacgccacgtggctcaaccctattgcaaggttcgctccctcgctgacagccgtcggatcgcgttggtcggaaatcgccacggtggacctaattgtaatatacgaagtttaaggggttgttttacaaaaggtcaatgcatgcctctcattcagtcatgcactcatgcctgcgctttgtttccgtcaaggacagaggaactccactcccttctcctcggccacgttgccgccgcgtacctccaccaattccgccctgatctcctccggacatgctcatccgcgggctattgacggacatctccagccgcggccggcagtccagtcggagtcggaggaggccgccagattttttctacccctccccgttcgtgccgtctctctacccctgcccttccatttgccgtggccatgggccggaccaccatcgccgtgcggagggacgaccggagtatggcgtatacggcgtcgtgcgcggcagcgggccgcgcgacgagcctgggcgcatcggatttaagtatggcagccacatgtatctttctgttgttcttaataaattgggtgtatcatttattcaggtgccctgttgcaattgaagaatggaggatagtttgctatgctttcaacattagctcgctaagtgtgcataaacttgtcagtaatctggctacattattttcaaatagaactgtttatggaggtggagcgggagctagcatttccgcgtggaggcaaccgaagacatcgcggcggcgcgagaagcagcgagcgcggcgcgtacgcggcggcgaagacgatactcgaccgccggcaggaggcgctcgccggcgacgccaggtgcgcggcgctggtgtcggagctgcgcgagctgagcgcccgcgtggcgaacaggcgggagtacgagcagactgggcgcgcgtgcatgctcgccggcgtgaactcgcacacacagcagcgtgccacgtcggtgcagctgtactcttttttttttttgggaagatagttggtgggggtaaaccaattaaagattttgctctagatctttataacataatcttgacaaaaaatgtgacggtggcagagattaaacagagagtgttgggttgaatcaaattcagaagagatttaaatgtagcaaaaaagagaaaatgggctaatttcagcagagcctggacaatgttagtccaactaatgaaaaagacaggctgatttggaggctgtttaacaaaggtttctctgtcaaatctttctatagagcttagacaatgcaggagattaactatccctacaagaaaatgtggaaaatcaaagcaccacccagggtgaaagtcttctcctggctggttttaagaaatagtattcttacaaaagataacttgtttaaaagaggttggagaaagggctcgattaaatgtcaattctgtgacaaaagtgaatccatccaacatttgtttttagattgccccatggctcacttcatttggagtgttgttgaatgcgctttcaatgtgaggcctggtaggaatgtgggggaaatgtttggctcctgggctttgaaatttggaaaggggaatgggaagttgatcatggtgggggtcacagcagtcttgtggaccatttggaaagcaagaaacagagcttgttttgatggcattctgcctgttgatcccatagaattaatttacaccatttgctcaaacttaaattcttggagtattttgcagaacaaggagggagacagagaaagcatgtagtggggagcgcagctactaaggcaggtagcaaatgaggtttttcgctcaaaatttggatggaggggaaccagagaaagaataggatgggaaacagaggcaggctgaactgatggcaagagtttgaagactgtgatgaagctggaaatcggtgtttttcttgtgatgaattactaatgttttagtcctgtaataattttgtttctttttctctccttttatctgtttgaacttgatgcgttgaaactcttgtaatcagctgcgttttcatcaaaaacgggggagatgctctccctttctcaaaaaaaaactcgacgccggtgatgcagagcatggtggagtcgtcgcggaagacacgagtgagcggcagagggggcaactgaaactgaagaagaagacaacaccgaaggcgtcgaagcttttaggttaagtttaggttgtttttggtttggatttgtcaatctgaagtttgaaattttaaattgtctttgtctagagcttttggtcaagtacgtttgagtctgaattaacatgtgtttcattttatacatttgttcaattaaaagtatgcgttccccggctcaggctgtctcattttatttgggcgcaattttcatgtatgtgcatgtcctatactccatctcaaaataaaAcaattaactttttccagattcaagtgcaaacggatcggcccaatttgcacacttacatatttcatcaaccagggccatacctag

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CDS seq

atggaggcacaacaagagcaaattctgcaggaggggatccgcaacaacaagggaaagaagaagcgatctcgtgcgtggaagacgtttatccgtctcaccggtccaggcgagctggtaagagccgagtgcataaaatgccaccaggtgtacgcggccgactcggtaaaaaacggcactagtaatctgttgaagcacgccaacaaatgcagctgcctggagcaggacggcggaaccatcgcgccggaaagcagatcgtcatgttcgggcgacggcgacgacgacgactcgtcgagctgcgatccagtcctggaagacctcgcccgaatgatcgctttccatggattcgactcgtcgatcctggaggacaaccacttcaagaggttcgtgaaacgcatcaaccctcactttgagctgccctcacgccacggcattgacgagctctgccgccgcatctctctcgaggagaagatgggtttgagttcgcagctactggcatcttctgctaagttcaacttagccgcgggtacagcccggactgttgagggcacggtcgtatacattgcttaccacttcgttgatgatgaatggaatctcatcaagatcatcaaggatgcttacatggttgtgcctcgctttctctaccatggccctctactggacatcatggaggctgacatcaactgcgacgacgaccacgaaatgattatgagtagtaccatggaagaaatttccagctctggtatttcgcataggcttttcagcatggcatggggaatcattgacgatcgcagagaattgaggatgaatcacctaaacgagatattctcgggtacctgtgcggtgaaaagagaacttgtttataccgcctatgtggataatgtgcttcattcgattgctggatgcctcgcagataatctaaattcaagttacatctcatcttgtttgttcactccagtttctgatttaagtttaaatacacaagagcgtgaagagcttcttgcacagctctgtcttcaggacatttcgacttacaacgaacgttggtattccttctattgttcgttggagattcttcacaataaaggaagaggcggctgttccacaagagtgcaagacacctgcatccttaaaggagagcaagaaacagaatctacacgactactacgcaatatttggggtaagatataccaggccattcaaaacatctccgttcccaatcttccaacttcaaatctgtgcctaagagaactttttctcgtgagggaagctttgcaatcagaattgcaaggggcatgtggagataaggcaaatctttacaatgacaacattatattttccggtggcaagggtgttgccgatgttctcggagaggcaaaggacaggttggacatgaacatactcgactcatacttgatatggtccatacctttagtattagacccccgatacaatctcaggtatatagagtccactttcccgggagtttatggttccgaggctccaaagtacatctccggcataaaatcgaaaatttcccagctgtttactgaataccgtaatgatgctgaaaccagctcgaatgctctcgatgggatggatatcaacagtaatgatccacatcaactgcgacaggcatggcaggagtattctcaatatgagtgcaagtcagaacttgaaagttacctggaagacgatcactttcctgatctcaaagatagttttgacattctgaactggtggagggagaaaagcctcgagtacccgattgtggcaaggatggcgaaggacgctctgtccatgcctacatgcagtaagctatcttctcaacaaacctcccaagaggcgctcgccggcgacgccaggtgcgcggcgctggtgtcggagctgcgcgagctgagcgcccgcgtggcgaacaggcgggagtacgagcagactgggcgcgcattcaagtgcaaacggatcggcccaatttgcacacttacatatttcatcaaccagggccatacctag

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Protein seq

MEAQQEQILQEGIRNNKGKKKRSRAWKTFIRLTGPGELVRAECIKCHQVYAADSVKNGTSNLLKHANKCSCLEQDGGTIAPESRSSCSGDGDDDDSSSCDPVLEDLARMIAFHGFDSSILEDNHFKRFVKRINPHFELPSRHGIDELCRRISLEEKMGLSSQLLASSAKFNLAAGTARTVEGTVVYIAYHFVDDEWNLIKIIKDAYMVVPRFLYHGPLLDIMEADINCDDDHEMIMSSTMEEISSSGISHRLFSMAWGIIDDRRELRMNHLNEIFSGTCAVKRELVYTAYVDNVLHSIAGCLADNLNSSYISSCLFTPVSDLSLNTQEREELLAQLCLQDISTYNERWYSFYCSLEILHNKGRGGCSTRVQDTCILKGEQETESTRLLRNIWGKIYQAIQNISVPNLPTSNLCLRELFLVREALQSELQGACGDKANLYNDNIIFSGGKGVADVLGEAKDRLDMNILDSYLIWSIPLVLDPRYNLRYIESTFPGVYGSEAPKYISGIKSKISQLFTEYRNDAETSSNALDGMDINSNDPHQLRQAWQEYSQYECKSELESYLEDDHFPDLKDSFDILNWWREKSLEYPIVARMAKDALSMPTCSKLSSQQTSQEALAGDARCAALVSELRELSARVANRREYEQTGRAFKCKRIGPICTLTYFINQGHT

Function Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot:Q6AVI0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_08g0001710 OsLiXu_08g0001710.01 Chr08 1461019 1469080 + NAM
CDS seq

atggaggcacaacaagagcaaattctgcaggaggggatccgcaacaacaagggaaagaagaagcgatctcgtgcgtggaagacgtttatccgtctcaccggtccaggcgagctggtaagagccgagtgcataaaatgccaccaggtgtacgcggccgactcggtaaaaaacggcactagtaatctgttgaagcacgccaacaaatgcagctgcctggagcaggacggcggaaccatcgcgccggaaagcagatcgtcatgttcgggcgacggcgacgacgacgactcgtcgagctgcgatccagtcctggaagacctcgcccgaatgatcgctttccatggattcgactcgtcgatcctggaggacaaccacttcaagaggttcgtgaaacgcatcaaccctcactttgagctgccctcacgccacggcattgacgagctctgccgccgcatctctctcgaggagaagatgggtttgagttcgcagctactggcatcttctgctaagttcaacttagccgcgggtacagcccggactgttgagggcacggtcgtatacattgcttaccacttcgttgatgatgaatggaatctcatcaagatcatcaaggatgcttacatggttgtgcctcgctttctctaccatggccctctactggacatcatggaggctgacatcaactgcgacgacgaccacgaaatgattatgagtagtaccatggaagaaatttccagctctggtatttcgcataggcttttcagcatggcatggggaatcattgacgatcgcagagaattgaggatgaatcacctaaacgagatattctcgggtacctgtgcggtgaaaagagaacttgtttataccgcctatgtggataatgtgcttcattcgattgctggatgcctcgcagataatctaaattcaagttacatctcatcttgtttgttcactccagtttctgatttaagtttaaatacacaagagcgtgaagagcttcttgcacagctctgtcttcaggacatttcgacttacaacgaacgttggtattccttctattgttcgttggagattcttcacaataaaggaagaggcggctgttccacaagagtgcaagacacctgcatccttaaaggagagcaagaaacagaatctacacgactactacgcaatatttggggtaagatataccaggccattcaaaacatctccgttcccaatcttccaacttcaaatctgtgcctaagagaactttttctcgtgagggaagctttgcaatcagaattgcaaggggcatgtggagataaggcaaatctttacaatgacaacattatattttccggtggcaagggtgttgccgatgttctcggagaggcaaaggacaggttggacatgaacatactcgactcatacttgatatggtccatacctttagtattagacccccgatacaatctcaggtatatagagtccactttcccgggagtttatggttccgaggctccaaagtacatctccggcataaaatcgaaaatttcccagctgtttactgaataccgtaatgatgctgaaaccagctcgaatgctctcgatgggatggatatcaacagtaatgatccacatcaactgcgacaggcatggcaggagtattctcaatatgagtgcaagtcagaacttgaaagttacctggaagacgatcactttcctgatctcaaagatagttttgacattctgaactggtggagggagaaaagcctcgagtacccgattgtggcaaggatggcgaaggacgctctgtccatgcctacatgcagtaagctatcttctcaacaaacctcccaagaggcgctcgccggcgacgccaggtgcgcggcgctggtgtcggagctgcgcgagctgagcgcccgcgtggcgaacaggcgggagtacgagcagactgggcgcgcattcaagtgcaaacggatcggcccaatttgcacacttacatatttcatcaaccagggccatacctag

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Protein seq

MEAQQEQILQEGIRNNKGKKKRSRAWKTFIRLTGPGELVRAECIKCHQVYAADSVKNGTSNLLKHANKCSCLEQDGGTIAPESRSSCSGDGDDDDSSSCDPVLEDLARMIAFHGFDSSILEDNHFKRFVKRINPHFELPSRHGIDELCRRISLEEKMGLSSQLLASSAKFNLAAGTARTVEGTVVYIAYHFVDDEWNLIKIIKDAYMVVPRFLYHGPLLDIMEADINCDDDHEMIMSSTMEEISSSGISHRLFSMAWGIIDDRRELRMNHLNEIFSGTCAVKRELVYTAYVDNVLHSIAGCLADNLNSSYISSCLFTPVSDLSLNTQEREELLAQLCLQDISTYNERWYSFYCSLEILHNKGRGGCSTRVQDTCILKGEQETESTRLLRNIWGKIYQAIQNISVPNLPTSNLCLRELFLVREALQSELQGACGDKANLYNDNIIFSGGKGVADVLGEAKDRLDMNILDSYLIWSIPLVLDPRYNLRYIESTFPGVYGSEAPKYISGIKSKISQLFTEYRNDAETSSNALDGMDINSNDPHQLRQAWQEYSQYECKSELESYLEDDHFPDLKDSFDILNWWREKSLEYPIVARMAKDALSMPTCSKLSSQQTSQEALAGDARCAALVSELRELSARVANRREYEQTGRAFKCKRIGPICTLTYFINQGHT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0198000 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g08240 SBH 0.556467 0.425427 0.564364
Nipponbare | IRGSP 1.0 | RAP-db Os08g0198000 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0001770 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0001640 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0022100 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0001530 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0023700 RBH 0 0 0.0005285
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0001620 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0001700 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0005140 SBH 0.947337 7.223179 6.845451
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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