Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os08g0198000 | OGI:08003760 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr08:5663578-5664043 | ||||||||
| Gene Symbol | WRKY105, OsWRKY105, WRKY117, OsWRKY117, DLN205, OsDLN205, WRKY118, OsWRKY118 | ||||||||||
| DNA seq | TCAGCTTCCACCGTTTTCATCACCTGTTTCTGTTAACCAACAGGCAGGAACATCACAGTTACAGTCAGCAATACTAAATACTAGGTTCACTACATGTTGAATGATATGAAGTATATAGCTGCACTGTACCTGAGGATTTTATCCAATCCTGAGTGCAGATGAGGGCTTCCACTATCTCAGGACTAAGCTTTCGATTGAAAAGGCTCACCCGTTCATCAGTTTCGTCGAAAGCAGACTCAGCAGAAACCGCACTTCCAGGTATTGCTAAAATGTCGCGTGCAAGCCTAGCAAGAGTTGGATACGTCAACGCATTATCCTTCCACCATTTCAGGATATCAAATTGTTCATTTTGAGGACAAAGTCCCCCTTCAAGGTACAAAGTCAGTTCTCTGAATTCCCCGAGTGCCGATTGCCCAATGTCATTTTGATCGGTGCCATGTAATGAATCATTACCATCTCTATCCAT
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| CDS seq | ATGGATAGAGATGGTAATGATTCATTACATGGCACCGATCAAAATGACATTGGGCAATCGGCACTCGGGGAATTCAGAGAACTGACTTTGTACCTTGAAGGGGGACTTTGTCCTCAAAATGAACAATTTGATATCCTGAAATGGTGGAAGGATAATGCGTTGACGTATCCAACTCTTGCTAGGCTTGCACGCGACATTTTAGCAATACCTGGAAGTGCGGTTTCTGCTGAGTCTGCTTTCGACGAAACTGATGAACGGGTGAGCCTTTTCAATCGAAAGCTTAGTCCTGAGATAGTGGAAGCCCTCATCTGCACTCAGGATTGGATAAAATCCTCAGAAACAGGTGATGAAAACGGTGGAAGCTGA |
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| Protein seq | MDRDGNDSLHGTDQNDIGQSALGEFRELTLYLEGGLCPQNEQFDILKWWKDNALTYPTLARLARDILAIPGSAVSAESAFDETDERVSLFNRKLSPEIVEALICTQDWIKSSETGDENGGS |
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| Function | Putative AC9 transposase [UniProtKB/Swiss-Prot:P03010] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os08g0198000 | Os08t0198000-00 | Chr08 | 5663578 | 5664043 | - | irgsp1_rep | ||
| CDS seq | ATGGATAGAGATGGTAATGATTCATTACATGGCACCGATCAAAATGACATTGGGCAATCGGCACTCGGGGAATTCAGAGAACTGACTTTGTACCTTGAAGGGGGACTTTGTCCTCAAAATGAACAATTTGATATCCTGAAATGGTGGAAGGATAATGCGTTGACGTATCCAACTCTTGCTAGGCTTGCACGCGACATTTTAGCAATACCTGGAAGTGCGGTTTCTGCTGAGTCTGCTTTCGACGAAACTGATGAACGGGTGAGCCTTTTCAATCGAAAGCTTAGTCCTGAGATAGTGGAAGCCCTCATCTGCACTCAGGATTGGATAAAATCCTCAGAAACAGGTGATGAAAACGGTGGAAGCTGA
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| Protein seq | MDRDGNDSLHGTDQNDIGQSALGEFRELTLYLEGGLCPQNEQFDILKWWKDNALTYPTLARLARDILAIPGSAVSAESAFDETDERVSLFNRKLSPEIVEALICTQDWIKSSETGDENGGS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0198000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g09800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0198100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0006400 | RBH | 0.110099 | 4.927837 | 1.164720 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0005500 | SBH | 0.361978 | 0.342623 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0001630 | RBH | 0.0 | 3.425688 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0086600 | RBH | 3.897408 | 0.930655 | 0.0053675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0001520 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0089800 | RBH | 0 | 0.0051255 | 0.1480185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0001610 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0001700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005140 | SBH | 0.947337 | 7.223179 | 6.845451 |
