Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_05G0467100 OGI:05078630 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr05:29739091-29743009
Gene Symbol -
DNA seq

CGTTCCCCAATTCGCCACCTCCCCTCTCCCTAACCCCTAACCCCTAACCTACAGGCGCGGGCGACGGCCGTGGACCGGCGGCGAGACGGCCGGCAGCGCGTGGCCCGTGTGCGTGCCGCAAGCAGGCGGCGGCGTCCGGAGAGACGCGAGCGGGCGGGCCAGGCGGCGGTCCAGCGCCGCCGCACGGGTGGGGAGGTCGCGAGCCGTGAGCCAGCGAGGACGCAAGGTGGGCAGGCAGCGGCGCAGCACTTCAGTGGCCGGCAACGACGCAGCGTGTATCAGCAACCCGGTGATTGGAATTGAAATTGAAATCGGTAACCTGCTAACCTCTAATAGTAATACGCAAACCTCTAATACTAATACGCATAGACAGTCTAAAATACTAATACGCATAGACAGTCTAAAATAGTGTCTCAATGGTTCATGTTCAGTGAGGTAGTGATTCAAATTTATAATTGGTTTCTATACATTTTTAGATTGTCAACATGTCAAAAAAGAACACTGCTCACGTATTACGCATTATTCTAGTGTCCCAGCAACACAAATACCAGCGATCCTACATATCATTAGTTAGGTGTATGTCTACTTTGAACTATGACATGTAGCCAATTTATACGTGAGACATGTTTCGATTTATGCTGGCCTAATTTGTTCAGCCCCCACTATTATTTTTTCTTGGATCTGCCCAACCTCCATTGATGATTTTGTTTACCTCTTGCTACGTGTTCACTGTGCGATTTGTTGTGCTGAAAAGTTTTTTGTTCTCTCTCCAAAAGATCTACTGTTAGTCTTTCAAAGTTCAGTTTGAAGTAGTGATTTCTGAATCTCGTCGGGGAAATCAGTCATTTGTTTCGTTGAGCTGTTTGGCGAAGCAACTGTGTCATTTCATTGTGCTAACTGCTAAGATCGTGTCAGTAAAGATTTATGATGTCTACTTGTACTTATGCTGTGACCTGTTTGAGGTCTTATCTTGACATTCTATCTTATTACACTTTGATAATTAAATCGAGAAATTGATTATCTATACTCTTCGTTATGCTAACTGCTAAGATCATGCGAAGATTTATGGTGTCTACTTCTACTTATGCTGTGACCTGTTTGAGATCTTATTATGCTTTAGTAATTATATTGACAAATTAGTTATCTATACTCTTTATTATGCTTTGATAATTATATTGGCAAATTGGTTATCTATACTCTTTTTAAAGAACAAAATAGTGGTGGTGGAGGCAGTTAATTTGCCACCCCACCAACTCTGTCGATATTTTTTTTTACCAACTACTTCTGTTCTGTTCTTAATTTTATTTCTGGGTCTGATTAATTTAAGATGTTGATTACATTGGACATGGCTTGATTTTATTTGTACTAACACCAACAGGTTTTTGGGTTCCACCAGCTGGTCTTTCTTAGGATGTGTGAACCAAGTGGCAGTGATGATGCAATGGTGCATGCCAGTGAGATGGTTGATGGTGATGAGATGATCCACGGCAATGAGATGGTAGTTCATGACAGTGTGATGATCGATGGTAACGAGATGGTTCAAGAGAACGTCATGGTCCATGGGAGTGGTGAGATGGTTCAAGGAAGTGAGATGGTCCATAATAATGAAATCATTCAAGTTAATGACATGATACAAGTCAACGAGATGGTCAATGGTGATAAGATGGCCCATGGTCATGAGTTGGTCGGTGTTGAGTTGACCACGCCAACCGCATCAAGACGCCGGAGAAAAAAGTCAGTTGTCTGGGAGCACTTCACGATTGAAGAAATGCCTGGGGGAGTTTCACGAGCATCCTGCAATCTATGCAAGCAAACCTTCGCATACAGTTGCGGCTCAAAAATTTCAGGTACTAGCCATCTCAAGAGGCATATCACCCTGGCTTCATGTCCCATGTTGAAAAATGAGGATATGAAACTTTCATTGCCTTTAGCGACAGTAACTAACAATGATGGTGAGGGTTGTGCAGAACGTGTTGCTAAAAGGCATTACAGATCTACTGGCTATGCAAATGCTATGTTTGATCAAGACCGCACCTGCTCGAATCTGGCTAAGATGATAATTTTGCATGACTACCCACTTCACATTGTCGAACAGCGAGGCTTCACTGCATTTATTGGGAGTTTGCAGCCTCGTTTCAGGGTGATAGATGTTGATACAATTGAAGGACAGGTGCATTCTGTTTATCAGAAAGAAAGGGAAAACCTGATGCATGTGTTCAGCACTGTGCCTGGAAGAATCAGCCTCACTGTAAGATTGTGGGCAACTAGTCAGACTCTTGGATATATTTCACTTGCAGCACAATTTATTGACACTGAATGGAGAGTGCATCGAAGAATGGTTAACTTCATGATGGTCTCTTCGCCTCATTCAGAGAATTCACTTAGTGAAGCTATCAGTACAAGCCTCTCAGACTGGAACATGAAGGACAAGCTATTCACCATCACATTGGATAATGATCCCTCGTCACATGATATCTACAGTGCAAACATGATAAACTATCTCTCCAACAAGAAGGACAACATCATGATCAAGGGCCAGTTGTTTGTTGTGAGATGTTATGCACATATACTGAACACAGTCGCACAAGATGTCATTGCTTCTGTTCATAGTGTGATCTATCATATCCGTGAAAGTATAAAGTTCATAAAAGCTTCTTCTGTCCACGAGGATAAGTTTGCGGAAATTGCTCTGCAGTTGGAGATCCCCAGTGCAAAGACCCTTTGTCTCGATGTTACAACCCAGTGGAATACAACTTATCTTATGCTTCTGGCTGCATTGGATTATCAGCAGGTATTTGCATCATTAGAGACGTGTGATGGTGACTACAATGAAGCACCATCCACAGAGGACTGGAAGAAGGTCGAGGCGGCATGCAGTTATCTTAGTCTGCTCTATGATTCTGCACACAACATCATGGCTGCACCAAATCCAACTTCAAATATCTTCTTCCATGAGGCATGGAAGCTTCAGTCAGAGCTTTCAAATGCCATTGCCCATGAAGACCCAATTTTCAGGAGCACTGCCAAAATCATGCATGAAAGGTTCGACAAGTACTGGAAGGACTGCAACCTCGTGCTAGCCATTGCTGTTGTCATGGATCCACGCTTCAAGATGAAGCTTGTTGAGTTCAGCTACTCAAAAATTCATAGTGTCGAGGCCGCGAAGTATGTCAAGGTGGTGGATGATGCTATCCATGAGCTTTACAGCGAGTATGCCACGCAGGGGGAAGCTAACAGAGATGCCCATGTAACGGACAATAGTGCTGCAGTGACTCCACCCAATGGCGATGAACTCTTAGACTTCGATATCTATCTTTCAGAAATTGCGACGAGCCAGCCCTCAATATCTGAGCTGGAGCAATACCTGGAAGAAGCCCTCATGCCCCGCATCCAAGACTTTGAAATTTTGGAGTGGTGGAAGCTTAACACCATTAAGTTCCCAACACTCTCCAAGATGGCTCGTGATGTATTGGCCATCCCCATGTCCATGGTGAGCAGTGGTAGCTCTATATTTTCGGCGACGGCAACGGGAAGCCAGATGCTTGATGACTACAGAAGCTCCCTGCGTCCTGAAACTGTGGAGTCTCTTTTCTGTGCGAAGGACTGGCTGCAGTACCCACCGGCTACCACTGAAGCTCCAAGCACAGCGTTGGTGAAGATGGAGAACTAAGTTATAACTTAGTATTAGTTAAATATTTGCATTTAGGTGGTGTTTAATTTGCATGTGGTTTTTTGGCTGTGTGAGTGGTTTAGAACATAGAATGTGACTCAGATTCCGTTCTAGCTACCCCTCAGATTACTTTGCACCATATGTTATATTACTAGATAATCTTAAGCCATGTGACTGAGAGTTCGAAGTTATAAAGGATATTAGGAGCCATCTTCAATAAAGCTAGGCAATTAGAGGTATGTGAACAGG

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CDS seq

ATGTGTGAACCAAGTGGCAGTGATGATGCAATGGTGCATGCCAGTGAGATGGTTGATGGTGATGAGATGATCCACGGCAATGAGATGGTAGTTCATGACAGTGTGATGATCGATGGTAACGAGATGGTTCAAGAGAACGTCATGGTCCATGGGAGTGGTGAGATGGTTCAAGGAAGTGAGATGGTCCATAATAATGAAATCATTCAAGTTAATGACATGATACAAGTCAACGAGATGGTCAATGGTGATAAGATGGCCCATGGTCATGAGTTGGTCGGTGTTGAGTTGACCACGCCAACCGCATCAAGACGCCGGAGAAAAAAGTCAGTTGTCTGGGAGCACTTCACGATTGAAGAAATGCCTGGGGGAGTTTCACGAGCATCCTGCAATCTATGCAAGCAAACCTTCGCATACAGTTGCGGCTCAAAAATTTCAGGTACTAGCCATCTCAAGAGGCATATCACCCTGGCTTCATGTCCCATGTTGAAAAATGAGGATATGAAACTTTCATTGCCTTTAGCGACAGTAACTAACAATGATGGTGAGGGTTGTGCAGAACGTGTTGCTAAAAGGCATTACAGATCTACTGGCTATGCAAATGCTATGTTTGATCAAGACCGCACCTGCTCGAATCTGGCTAAGATGATAATTTTGCATGACTACCCACTTCACATTGTCGAACAGCGAGGCTTCACTGCATTTATTGGGAGTTTGCAGCCTCGTTTCAGGGTGATAGATGTTGATACAATTGAAGGACAGGTGCATTCTGTTTATCAGAAAGAAAGGGAAAACCTGATGCATGTGTTCAGCACTGTGCCTGGAAGAATCAGCCTCACTGTAAGATTGTGGGCAACTAGTCAGACTCTTGGATATATTTCACTTGCAGCACAATTTATTGACACTGAATGGAGAGTGCATCGAAGAATGGTTAACTTCATGATGGTCTCTTCGCCTCATTCAGAGAATTCACTTAGTGAAGCTATCAGTACAAGCCTCTCAGACTGGAACATGAAGGACAAGCTATTCACCATCACATTGGATAATGATCCCTCGTCACATGATATCTACAGTGCAAACATGATAAACTATCTCTCCAACAAGAAGGACAACATCATGATCAAGGGCCAGTTGTTTGTTGTGAGATGTTATGCACATATACTGAACACAGTCGCACAAGATGTCATTGCTTCTGTTCATAGTGTGATCTATCATATCCGTGAAAGTATAAAGTTCATAAAAGCTTCTTCTGTCCACGAGGATAAGTTTGCGGAAATTGCTCTGCAGTTGGAGATCCCCAGTGCAAAGACCCTTTGTCTCGATGTTACAACCCAGTGGAATACAACTTATCTTATGCTTCTGGCTGCATTGGATTATCAGCAGGTATTTGCATCATTAGAGACGTGTGATGGTGACTACAATGAAGCACCATCCACAGAGGACTGGAAGAAGGTCGAGGCGGCATGCAGTTATCTTAGTCTGCTCTATGATTCTGCACACAACATCATGGCTGCACCAAATCCAACTTCAAATATCTTCTTCCATGAGGCATGGAAGCTTCAGTCAGAGCTTTCAAATGCCATTGCCCATGAAGACCCAATTTTCAGGAGCACTGCCAAAATCATGCATGAAAGGTTCGACAAGTACTGGAAGGACTGCAACCTCGTGCTAGCCATTGCTGTTGTCATGGATCCACGCTTCAAGATGAAGCTTGTTGAGTTCAGCTACTCAAAAATTCATAGTGTCGAGGCCGCGAAGTATGTCAAGGTGGTGGATGATGCTATCCATGAGCTTTACAGCGAGTATGCCACGCAGGGGGAAGCTAACAGAGATGCCCATGTAACGGACAATAGTGCTGCAGTGACTCCACCCAATGGCGATGAACTCTTAGACTTCGATATCTATCTTTCAGAAATTGCGACGAGCCAGCCCTCAATATCTGAGCTGGAGCAATACCTGGAAGAAGCCCTCATGCCCCGCATCCAAGACTTTGAAATTTTGGAGTGGTGGAAGCTTAACACCATTAAGTTCCCAACACTCTCCAAGATGGCTCGTGATGTATTGGCCATCCCCATGTCCATGGTGAGCAGTGGTAGCTCTATATTTTCGGCGACGGCAACGGGAAGCCAGATGCTTGATGACTACAGAAGCTCCCTGCGTCCTGAAACTGTGGAGTCTCTTTTCTGTGCGAAGGACTGGCTGCAGTACCCACCGGCTACCACTGAAGCTCCAAGCACAGCGTTGGTGAAGATGGAGAACTAA

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Protein seq

MCEPSGSDDAMVHASEMVDGDEMIHGNEMVVHDSVMIDGNEMVQENVMVHGSGEMVQGSEMVHNNEIIQVNDMIQVNEMVNGDKMAHGHELVGVELTTPTASRRRRKKSVVWEHFTIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCPMLKNEDMKLSLPLATVTNNDGEGCAERVAKRHYRSTGYANAMFDQDRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENLMHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSEAISTSLSDWNMKDKLFTITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIKASSVHEDKFAEIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVFASLETCDGDYNEAPSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQSELSNAIAHEDPIFRSTAKIMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAAKYVKVVDDAIHELYSEYATQGEANRDAHVTDNSAAVTPPNGDELLDFDIYLSEIATSQPSISELEQYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVESLFCAKDWLQYPPATTEAPSTALVKMEN

Function Zinc finger BED domain-containing protein RICESLEEPER 3 [UniProtKB/Swiss-Prot:Q75HY5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_05G0467100 OsZS97_05T0467100.1 Chr05 29739091 29743009 + makerRMon
CDS seq

ATGTGTGAACCAAGTGGCAGTGATGATGCAATGGTGCATGCCAGTGAGATGGTTGATGGTGATGAGATGATCCACGGCAATGAGATGGTAGTTCATGACAGTGTGATGATCGATGGTAACGAGATGGTTCAAGAGAACGTCATGGTCCATGGGAGTGGTGAGATGGTTCAAGGAAGTGAGATGGTCCATAATAATGAAATCATTCAAGTTAATGACATGATACAAGTCAACGAGATGGTCAATGGTGATAAGATGGCCCATGGTCATGAGTTGGTCGGTGTTGAGTTGACCACGCCAACCGCATCAAGACGCCGGAGAAAAAAGTCAGTTGTCTGGGAGCACTTCACGATTGAAGAAATGCCTGGGGGAGTTTCACGAGCATCCTGCAATCTATGCAAGCAAACCTTCGCATACAGTTGCGGCTCAAAAATTTCAGGTACTAGCCATCTCAAGAGGCATATCACCCTGGCTTCATGTCCCATGTTGAAAAATGAGGATATGAAACTTTCATTGCCTTTAGCGACAGTAACTAACAATGATGGTGAGGGTTGTGCAGAACGTGTTGCTAAAAGGCATTACAGATCTACTGGCTATGCAAATGCTATGTTTGATCAAGACCGCACCTGCTCGAATCTGGCTAAGATGATAATTTTGCATGACTACCCACTTCACATTGTCGAACAGCGAGGCTTCACTGCATTTATTGGGAGTTTGCAGCCTCGTTTCAGGGTGATAGATGTTGATACAATTGAAGGACAGGTGCATTCTGTTTATCAGAAAGAAAGGGAAAACCTGATGCATGTGTTCAGCACTGTGCCTGGAAGAATCAGCCTCACTGTAAGATTGTGGGCAACTAGTCAGACTCTTGGATATATTTCACTTGCAGCACAATTTATTGACACTGAATGGAGAGTGCATCGAAGAATGGTTAACTTCATGATGGTCTCTTCGCCTCATTCAGAGAATTCACTTAGTGAAGCTATCAGTACAAGCCTCTCAGACTGGAACATGAAGGACAAGCTATTCACCATCACATTGGATAATGATCCCTCGTCACATGATATCTACAGTGCAAACATGATAAACTATCTCTCCAACAAGAAGGACAACATCATGATCAAGGGCCAGTTGTTTGTTGTGAGATGTTATGCACATATACTGAACACAGTCGCACAAGATGTCATTGCTTCTGTTCATAGTGTGATCTATCATATCCGTGAAAGTATAAAGTTCATAAAAGCTTCTTCTGTCCACGAGGATAAGTTTGCGGAAATTGCTCTGCAGTTGGAGATCCCCAGTGCAAAGACCCTTTGTCTCGATGTTACAACCCAGTGGAATACAACTTATCTTATGCTTCTGGCTGCATTGGATTATCAGCAGGTATTTGCATCATTAGAGACGTGTGATGGTGACTACAATGAAGCACCATCCACAGAGGACTGGAAGAAGGTCGAGGCGGCATGCAGTTATCTTAGTCTGCTCTATGATTCTGCACACAACATCATGGCTGCACCAAATCCAACTTCAAATATCTTCTTCCATGAGGCATGGAAGCTTCAGTCAGAGCTTTCAAATGCCATTGCCCATGAAGACCCAATTTTCAGGAGCACTGCCAAAATCATGCATGAAAGGTTCGACAAGTACTGGAAGGACTGCAACCTCGTGCTAGCCATTGCTGTTGTCATGGATCCACGCTTCAAGATGAAGCTTGTTGAGTTCAGCTACTCAAAAATTCATAGTGTCGAGGCCGCGAAGTATGTCAAGGTGGTGGATGATGCTATCCATGAGCTTTACAGCGAGTATGCCACGCAGGGGGAAGCTAACAGAGATGCCCATGTAACGGACAATAGTGCTGCAGTGACTCCACCCAATGGCGATGAACTCTTAGACTTCGATATCTATCTTTCAGAAATTGCGACGAGCCAGCCCTCAATATCTGAGCTGGAGCAATACCTGGAAGAAGCCCTCATGCCCCGCATCCAAGACTTTGAAATTTTGGAGTGGTGGAAGCTTAACACCATTAAGTTCCCAACACTCTCCAAGATGGCTCGTGATGTATTGGCCATCCCCATGTCCATGGTGAGCAGTGGTAGCTCTATATTTTCGGCGACGGCAACGGGAAGCCAGATGCTTGATGACTACAGAAGCTCCCTGCGTCCTGAAACTGTGGAGTCTCTTTTCTGTGCGAAGGACTGGCTGCAGTACCCACCGGCTACCACTGAAGCTCCAAGCACAGCGTTGGTGAAGATGGAGAACTAA

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Protein seq

MCEPSGSDDAMVHASEMVDGDEMIHGNEMVVHDSVMIDGNEMVQENVMVHGSGEMVQGSEMVHNNEIIQVNDMIQVNEMVNGDKMAHGHELVGVELTTPTASRRRRKKSVVWEHFTIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCPMLKNEDMKLSLPLATVTNNDGEGCAERVAKRHYRSTGYANAMFDQDRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENLMHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSEAISTSLSDWNMKDKLFTITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIKASSVHEDKFAEIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVFASLETCDGDYNEAPSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQSELSNAIAHEDPIFRSTAKIMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAAKYVKVVDDAIHELYSEYATQGEANRDAHVTDNSAAVTPPNGDELLDFDIYLSEIATSQPSISELEQYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVESLFCAKDWLQYPPATTEAPSTALVKMEN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.2584455 1.815768 2.027012

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0583200 RBH 0.412452 0.616397 0.839855
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g50640 RBH 0.279488 0.412690 0.215210
Nipponbare | IRGSP 1.0 | RAP-db Os05g0583200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0028490 SBH 1.581802 10.798242 7.246579
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0028280 RBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0028280 SBH 2.474766 12.696512 14.353620
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0028340 SBH 0.475541 0.286392 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0028230 SBH 1.359025 2.740558 3.289575
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0454100 RBH 0.236369 1.918577 0.4738225
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0409900 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0027960 SBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0028200 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0028260 SBH 0.000000 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G027750 SBH 0.000000 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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