Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0409900 | OGI:01077420 | 12/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:26632426-26634916 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATCCACTTGTGTTGCAAGGGTACACAGATATCAGATGGAAACTTGGAATTAGATGTAACTTGAAGATTAAATTGACCAACATTTTCTTCAAACATCCATTGGTGCTATGTTGTCCCACTGCAACATAGCATTTCCACTGCCTCATGATCTGTTTCATTGGTCTTCAACAAAAAAATTATCAAGCATTAGTGAAAGTATAAAGTGAGCCACTATAAACATATGTTAGTAATACAAGCACAAACCAGGGACAACAAGGCACAAAAATTTCGCTCCAGGTTCTCCATGTCCATCTCAGTTAGGATAGACCCAACTACATTTCCACCTAAATGTTCATAATCATAGATTAACTCAAGAATTTGAATATGAACTAGTAAAAGCAATAAAAAAAAGGTGTACACACAGCTGAATATTACCTTTTCTTGATGCTGCAGTCCAATCTTTGGTGCAAATCAGAGCTTGCACAATTTCAGGATCTAGACGGCTACGAAACGGATCAATAACACGACCGCCGGCACTGAATGCAGATTCTGAAGCCACAGTTGATACTTGAATAGCTAGTACATCACGAGCAAGTCGACTAAGAATAGGAAGCTCATGTTGCTTGAGAGACCACCAATGCAAAATATTAAATGGGCTTTTGTCAGTTATGTCCCATTCCAACAGTGGTTGATCCATGTAAACTTCCAACTCACTTTTAGTACCTATTCCAGGGGCAGTACTAGCACGCAAGTATTGTAGAACATCTGCATCAAGTTCATCATCACTCTCCCCATCATACTCTTTAGTCACTAAAGGATTATTCTGCACATCTGTAGCTGCTGGAATCTTCGAAGTTGGTTGACTAGATGCATAAGTATCAAATAGCTTATTGATAATAGCCATGAAGTCTGCCATGTGTTTTGGGGCACTCTCACCATAAACCTTATCTGCATAATACTCAAGAAGTGTTCTCTTGAACCTAGGATCAAGAAAGCAAGCTACAGAAAGAGCCATATTGGACTTCTCCCAATATTTATCATACTTAGGTTTCATTGACTTGCCCATAGTTGCAATAACTGTATTAGAACTATGGCACCAATCTTCTACTGCCATCTTTATTTGACAAAATTTTGTAAAAAATAAATTGCAGTTGGATAACTACTGCCAGAGAAGATCAAAGTAGCATCATAAAATCTCTTCAAGCATGTACACAATGACTTTGCCATAGTCCAATCATCATCTGTTGGGGCACATTTCAAATATTTGTGTCTATGACGAAGAAAGAGCCTATTAAATGCAAGTCTATAGTGAATAGCTTGCTTTAACATGAGAAATGTGGAATTCCACCTTGTTGGAACATCCAAAGAGAGACCACAAGTAATGTCTAACCCATCACATTCAGAGGCACACTTCATGAATTCTTCCCACTGCAGCGGGGAGTTCTTTACAATCCAAACTGTGTTTCTGATATTTGAAATACTAGATGAAATTTGCTTCAAACCATCTTGAGCAACAAGATTGAAAATATGATTCAAACATCTAACATGAAAAAAGGCCCCATCACAGATCAAGGGTTGTATCTTGTTGAGCTTTTGTACTAACCCCCTAGCACATACATCATTGGCTGATGCATTGTCCAAAGTAAGTGCAAGCAATTTTCTATCAAGGTTCCAGTCCAGTACACTATCATAGAACACTTTGCACAAGTTGTTCCCTGAGTGATGGCCCTCTACATGCATAAACTTGATAATTCTCTTTTGCATGCACCAATTATCATCTATCCAATGCACAGTGATGCACATATAACATTTATTTTGATTTGAGGTCCACATATCCATGGTTGTACAAAAGCGGCATGAAAGAGTTTTGAAGTACTCATACATTTTCTTCTTCTCCTCCAAAAACATATTCAGTATGTCTTTCCTAACAGTTATGCGACTTTTGATTGGAAAAGTAGGGCGCAAGGACTTAATAAAATCCACAAAGTACTCATGCTCAACAATATTAAAGGGATATTCATGCATAATGATTGCCAAGTAAAATTTCTTCAAGCTAACAGCCTCATCATACCTGTAAGTCTCAACAGAAGTGCCGCTTTCACTCTTTTTGAGATTTAGAAGCTGCTGGCCACTTTTTATTTGGTGCTTTTTGTCTAAGTGACTCCAAAATATTGTTGTGCCCCTGTTGCTCTCACGACGAGATGTATAGCTGCACTTCTTACACTTTGCCCAAAGCTCTACGATCTCTGTTCCATCATCTCCTACTACCTTTTTCTCATACTTGTCAAAATGGCTCCAAACCTCGGAACTGCACTTCTTTGCTTTCTTTGTAGGAGGGACATTTGCATCCTCAGTAGCTTCTTGTGTCAAATCAACTTGAACTCTTGCTACTGCAGCAACATTTGCAGCAGGATCTCCTTCATTTGCAAGAGTTGGTTGCGATGCTCGCAAAGCTACAATACCCGCATTGCATATACTTGCACTGCTGCTACTTGCATTTGATGAATCCAT
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| CDS seq | ATGGATTCATCAAATGCAAGTAGCAGCAGTGCAAGTATATGCAATGCGGGTATTGTAGCTTTGCGAGCATCGCAACCAACTCTTGCAAATGAAGGAGATCCTGCTGCAAATGTTGCTGCAGTAGCAAGAGTTCAAGTTGATTTGACACAAGAAGCTACTGAGGATGCAAATGTCCCTCCTACAAAGAAAGCAAAGAAGTGCAGTTCCGAGGTTTGGAGCCATTTTGACAAGTATGAGAAAAAGGTAGTAGGAGATGATGGAACAGAGATCGTAGAGCTTTGGGCAAAGTGTAAGAAGTGCAGCTATACATCTCGTCGTGAGAGCAACAGGGGCACAACAATATTTTGGAGTCACTTAGACAAAAAGCACCAAATAAAAAGTGGCCAGCAGCTTCTAAATCTCAAAAAGAGTGAAAGCGGCACTTCTGTTGAGACTTACAGGTATGATGAGGCTGTTAGCTTGAAGAAATTTTACTTGGCAATCATTATGCATGAATATCCCTTTAATATTGTTGAGCATGAGTACTTTGTGGATTTTATTAAGTCCTTGCGCCCTACTTTTCCAATCAAAAGTCGCATAACTGTTAGGAAAGACATACTGAATATGTTTTTGGAGGAGAAGAAGAAAATGTATGAGTACTTCAAAACTCTTTCATGCCGCTTTTGTACAACCATGGATATGTGGACCTCAAATCAAAATAAATGTTATATGTGCATCACTGTGCATTGGATAGATGATAATTGGTGCATGCAAAAGAGAATTATCAAGTTTATGCATGTAGAGGGCCATCACTCAGGGAACAACTTGTGCAAAGTGTTCTATGATAGTGTACTGGACTGGAACCTTGATAGAAAATTGCTTGCACTTACTTTGGACAATGCATCAGCCAATGATATGGCAGTAGAAGATTGGTGCCATAGTTCTAATACAGTTATTGCAACTATGGGCAAGTCAATGAAACCTAAGTATGATAAATATTGGGAGAAGTCCAATATGGCTCTTTCTGTAGCTTGCTTTCTTGATCCTAGGTTCAAGAGAACACTTCTTGAGTATTATGCAGATAAGGTTTATGGTGAGAGTGCCCCAAAACACATGGCAGACTTCATGGCTATTATCAATAAGCTATTTGATACTTATGCATCTAGTCAACCAACTTCGAAGATTCCAGCAGCTACAGATGTGCAGAATAATCCTTTAGTGACTAAAGAGTATGATGGGGAGAGTGATGATGAACTTGATGCAGATGTTCTACAATACTTGCGTGCTAGTACTGCCCCTGGAATAGGTACTAAAAGTGAGTTGGAAGTTTACATGGATCAACCACTGTTGGAATGGGACATAACTGACAAAAGCCCATTTAATATTTTGCATTGGTGGTCTCTCAAGCAACATGAGCTTCCTATTCTTAGTCGACTTGCTCGTGATGTACTAGCTATTCAAGTATCAACTGTGGCTTCAGAATCTGCATTCAGTGCCGGCGGTCGTGTTATTGATCCGTTTCGTAGCCGTCTAGATCCTGAAATTGTGCAAGCTCTGATTTGCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTAGTTGGGTCTATCCTAACTGAGATGGACATGGAGAACCTGGAGCGAAATTTTTGTGCCTTGTTGTCCCTGATCATGAGGCAGTGGAAATGCTATGTTGCAGTGGGACAACATAGCACCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATCTTCAAGTTACATCTAATTCCAAGTTTCCATCTGATATCTGTGTACCCTTGCAACACAAGTGGATGA
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| Protein seq | MDSSNASSSSASICNAGIVALRASQPTLANEGDPAANVAAVARVQVDLTQEATEDANVPPTKKAKKCSSEVWSHFDKYEKKVVGDDGTEIVELWAKCKKCSYTSRRESNRGTTIFWSHLDKKHQIKSGQQLLNLKKSESGTSVETYRYDEAVSLKKFYLAIIMHEYPFNIVEHEYFVDFIKSLRPTFPIKSRITVRKDILNMFLEEKKKMYEYFKTLSCRFCTTMDMWTSNQNKCYMCITVHWIDDNWCMQKRIIKFMHVEGHHSGNNLCKVFYDSVLDWNLDRKLLALTLDNASANDMAVEDWCHSSNTVIATMGKSMKPKYDKYWEKSNMALSVACFLDPRFKRTLLEYYADKVYGESAPKHMADFMAIINKLFDTYASSQPTSKIPAATDVQNNPLVTKEYDGESDDELDADVLQYLRASTAPGIGTKSELEVYMDQPLLEWDITDKSPFNILHWWSLKQHELPILSRLARDVLAIQVSTVASESAFSAGGRVIDPFRSRLDPEIVQALICTKDWTAASRKGGNVVGSILTEMDMENLERNFCALLSLIMRQWKCYVAVGQHSTNGCLKKMLVNLIFKLHLIPSFHLISVYPCNTSG |
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| Function | Putative AC transposase [UniProtKB/Swiss-Prot:P08770] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0409900 | OsZS97_01T0409900.1 | Chr01 | 26632426 | 26634916 | - | makerRMon | ||
| CDS seq | ATGGATTCATCAAATGCAAGTAGCAGCAGTGCAAGTATATGCAATGCGGGTATTGTAGCTTTGCGAGCATCGCAACCAACTCTTGCAAATGAAGGAGATCCTGCTGCAAATGTTGCTGCAGTAGCAAGAGTTCAAGTTGATTTGACACAAGAAGCTACTGAGGATGCAAATGTCCCTCCTACAAAGAAAGCAAAGAAGTGCAGTTCCGAGGTTTGGAGCCATTTTGACAAGTATGAGAAAAAGGTAGTAGGAGATGATGGAACAGAGATCGTAGAGCTTTGGGCAAAGTGTAAGAAGTGCAGCTATACATCTCGTCGTGAGAGCAACAGGGGCACAACAATATTTTGGAGTCACTTAGACAAAAAGCACCAAATAAAAAGTGGCCAGCAGCTTCTAAATCTCAAAAAGAGTGAAAGCGGCACTTCTGTTGAGACTTACAGGTATGATGAGGCTGTTAGCTTGAAGAAATTTTACTTGGCAATCATTATGCATGAATATCCCTTTAATATTGTTGAGCATGAGTACTTTGTGGATTTTATTAAGTCCTTGCGCCCTACTTTTCCAATCAAAAGTCGCATAACTGTTAGGAAAGACATACTGAATATGTTTTTGGAGGAGAAGAAGAAAATGTATGAGTACTTCAAAACTCTTTCATGCCGCTTTTGTACAACCATGGATATGTGGACCTCAAATCAAAATAAATGTTATATGTGCATCACTGTGCATTGGATAGATGATAATTGGTGCATGCAAAAGAGAATTATCAAGTTTATGCATGTAGAGGGCCATCACTCAGGGAACAACTTGTGCAAAGTGTTCTATGATAGTGTACTGGACTGGAACCTTGATAGAAAATTGCTTGCACTTACTTTGGACAATGCATCAGCCAATGATATGGCAGTAGAAGATTGGTGCCATAGTTCTAATACAGTTATTGCAACTATGGGCAAGTCAATGAAACCTAAGTATGATAAATATTGGGAGAAGTCCAATATGGCTCTTTCTGTAGCTTGCTTTCTTGATCCTAGGTTCAAGAGAACACTTCTTGAGTATTATGCAGATAAGGTTTATGGTGAGAGTGCCCCAAAACACATGGCAGACTTCATGGCTATTATCAATAAGCTATTTGATACTTATGCATCTAGTCAACCAACTTCGAAGATTCCAGCAGCTACAGATGTGCAGAATAATCCTTTAGTGACTAAAGAGTATGATGGGGAGAGTGATGATGAACTTGATGCAGATGTTCTACAATACTTGCGTGCTAGTACTGCCCCTGGAATAGGTACTAAAAGTGAGTTGGAAGTTTACATGGATCAACCACTGTTGGAATGGGACATAACTGACAAAAGCCCATTTAATATTTTGCATTGGTGGTCTCTCAAGCAACATGAGCTTCCTATTCTTAGTCGACTTGCTCGTGATGTACTAGCTATTCAAGTATCAACTGTGGCTTCAGAATCTGCATTCAGTGCCGGCGGTCGTGTTATTGATCCGTTTCGTAGCCGTCTAGATCCTGAAATTGTGCAAGCTCTGATTTGCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTAGTTGGGTCTATCCTAACTGAGATGGACATGGAGAACCTGGAGCGAAATTTTTGTGCCTTGTTGTCCCTGATCATGAGGCAGTGGAAATGCTATGTTGCAGTGGGACAACATAGCACCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATCTTCAAGTTACATCTAATTCCAAGTTTCCATCTGATATCTGTGTACCCTTGCAACACAAGTGGATGA
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| Protein seq | MDSSNASSSSASICNAGIVALRASQPTLANEGDPAANVAAVARVQVDLTQEATEDANVPPTKKAKKCSSEVWSHFDKYEKKVVGDDGTEIVELWAKCKKCSYTSRRESNRGTTIFWSHLDKKHQIKSGQQLLNLKKSESGTSVETYRYDEAVSLKKFYLAIIMHEYPFNIVEHEYFVDFIKSLRPTFPIKSRITVRKDILNMFLEEKKKMYEYFKTLSCRFCTTMDMWTSNQNKCYMCITVHWIDDNWCMQKRIIKFMHVEGHHSGNNLCKVFYDSVLDWNLDRKLLALTLDNASANDMAVEDWCHSSNTVIATMGKSMKPKYDKYWEKSNMALSVACFLDPRFKRTLLEYYADKVYGESAPKHMADFMAIINKLFDTYASSQPTSKIPAATDVQNNPLVTKEYDGESDDELDADVLQYLRASTAPGIGTKSELEVYMDQPLLEWDITDKSPFNILHWWSLKQHELPILSRLARDVLAIQVSTVASESAFSAGGRVIDPFRSRLDPEIVQALICTKDWTAASRKGGNVVGSILTEMDMENLERNFCALLSLIMRQWKCYVAVGQHSTNGCLKKMLVNLIFKLHLIPSFHLISVYPCNTSG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0698300 | RBH | 0.749589 | 0.867366 | 1.800701 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g58560 | SBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0698300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0030290 | RBH | 2.456088 | 9.163258 | 11.191405 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0421100 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028951 | RBH | 0.108553 | 0.431461 | 0.467108 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0466900 | RBH | 17.326869 | 25.055609 | 52.5724335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
