Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0283700 | OGI:04058220 | 2/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:19317203-19317859 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACAGATGATCCGTCACTGAAGCCCGGATCTGTAGTAGTGATGGTGTGACGTTGTAAATCTGAGACGTGTTCATGCTTTCATCGAACGACACCCAGTAAGACTTGAGATCCACTGGGATGCTTGTTTGGCAGCAGCCTATCCCGGAGCATGTGCCGTTGGCCAGGGTTTTCAAGTCACCATACCCGCAGGTGGCCACACACCCGCTCGTGTACGTGTTGTCGTCATCGATGTATGCCAGTGTTCGACACCCGATGACCGTGAACTTGTTTCGGATGTCGGAGAACCTGTAGGGCTTGGACAGGTTGATCTGCCACTCGCTGTAGTCCATCTGTTTAGCTGTGCGGTTGTAGCAGGAAGAGGATATGAAATGCATCACCCGGCACTGGGCATCCTCCAGGGAGATGTTGAGAAGCTCGACCCCTCCACGGAACGGCTTGTAGGTACCGTTCCCGGTGTGATTGCAGCTTACGTTGAAGCCGGGAAATCCGCAGTGGTCAGGCGTATCAGTTGGCCCGATGGCGAACGGATACGGGATGTCGACGTCCCCGCATTTCCTTTGGCAATTGCTGCTAGGTGGTGGCAGGGCTCCAACGGCAGGGGCCCTTGCCACCAGACATAGTAGCGGCACAGCTGCTAGCAATTTGAGGAACGACAT
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| CDS seq | ATGTCGTTCCTCAAATTGCTAGCAGCTGTGCCGCTACTATGTCTGGTGGCAAGGGCCCCTGCCGTTGGAGCCCTGCCACCACCTAGCAGCAATTGCCAAAGGAAATGCGGGGACGTCGACATCCCGTATCCGTTCGCCATCGGGCCAACTGATACGCCTGACCACTGCGGATTTCCCGGCTTCAACGTAAGCTGCAATCACACCGGGAACGGTACCTACAAGCCGTTCCGTGGAGGGGTCGAGCTTCTCAACATCTCCCTGGAGGATGCCCAGTGCCGGGTGATGCATTTCATATCCTCTTCCTGCTACAACCGCACAGCTAAACAGATGGACTACAGCGAGTGGCAGATCAACCTGTCCAAGCCCTACAGGTTCTCCGACATCCGAAACAAGTTCACGGTCATCGGGTGTCGAACACTGGCATACATCGATGACGACAACACGTACACGAGCGGGTGTGTGGCCACCTGCGGGTATGGTGACTTGAAAACCCTGGCCAACGGCACATGCTCCGGGATAGGCTGCTGCCAAACAAGCATCCCAGTGGATCTCAAGTCTTACTGGGTGTCGTTCGATGAAAGCATGAACACGTCTCAGATTTACAACGTCACACCATCACTACTACAGATCCGGGCTTCAGTGACGGATCATCTGTGA
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| Protein seq | MSFLKLLAAVPLLCLVARAPAVGALPPPSSNCQRKCGDVDIPYPFAIGPTDTPDHCGFPGFNVSCNHTGNGTYKPFRGGVELLNISLEDAQCRVMHFISSSCYNRTAKQMDYSEWQINLSKPYRFSDIRNKFTVIGCRTLAYIDDDNTYTSGCVATCGYGDLKTLANGTCSGIGCCQTSIPVDLKSYWVSFDESMNTSQIYNVTPSLLQIRASVTDHL |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0283700 | OsZS97_04T0283700.1 | Chr04 | 19317203 | 19317859 | - | makerRMon | ||
| CDS seq | ATGTCGTTCCTCAAATTGCTAGCAGCTGTGCCGCTACTATGTCTGGTGGCAAGGGCCCCTGCCGTTGGAGCCCTGCCACCACCTAGCAGCAATTGCCAAAGGAAATGCGGGGACGTCGACATCCCGTATCCGTTCGCCATCGGGCCAACTGATACGCCTGACCACTGCGGATTTCCCGGCTTCAACGTAAGCTGCAATCACACCGGGAACGGTACCTACAAGCCGTTCCGTGGAGGGGTCGAGCTTCTCAACATCTCCCTGGAGGATGCCCAGTGCCGGGTGATGCATTTCATATCCTCTTCCTGCTACAACCGCACAGCTAAACAGATGGACTACAGCGAGTGGCAGATCAACCTGTCCAAGCCCTACAGGTTCTCCGACATCCGAAACAAGTTCACGGTCATCGGGTGTCGAACACTGGCATACATCGATGACGACAACACGTACACGAGCGGGTGTGTGGCCACCTGCGGGTATGGTGACTTGAAAACCCTGGCCAACGGCACATGCTCCGGGATAGGCTGCTGCCAAACAAGCATCCCAGTGGATCTCAAGTCTTACTGGGTGTCGTTCGATGAAAGCATGAACACGTCTCAGATTTACAACGTCACACCATCACTACTACAGATCCGGGCTTCAGTGACGGATCATCTGTGA
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| Protein seq | MSFLKLLAAVPLLCLVARAPAVGALPPPSSNCQRKCGDVDIPYPFAIGPTDTPDHCGFPGFNVSCNHTGNGTYKPFRGGVELLNISLEDAQCRVMHFISSSCYNRTAKQMDYSEWQINLSKPYRFSDIRNKFTVIGCRTLAYIDDDNTYTSGCVATCGYGDLKTLANGTCSGIGCCQTSIPVDLKSYWVSFDESMNTSQIYNVTPSLLQIRASVTDHL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.1574505 | 1.4797515 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0368800 | SBH | 0.092304 | 0.094660 | 1.559312 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30010 | SBH | 0.053534 | 0.057660 | 0.364482 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0368800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0010090 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010860 | SBH | 0.0 | 0.242682 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010540 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010250 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010430 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0293800 | RBH | 0.109127 | 0.749809 | 0.005102 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0009950 | RBH | 0.0 | 0.145485 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0284200 | SBH | 0.822063 | 6.2482565 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010130 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010140 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010200 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010420 | SBH | 0.000000 | 0.255983 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009550 | SBH | 0.057031 | 0.082531 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009580 | SBH | 0.0 | 5.172986 | 0.0 |
