Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os04g30010 OGI:04058110 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr04:17906097-17909802
Gene Symbol WAK45, OsWAK45, OsRLCK143, RLCK143
DNA seq

TGTTTGATGCACTTGAATTATTATATATTGTGAAACATGATTGTTTCACTTGTTCCTCACAATGCATGGTTACAGCCGCACACATTGGGAAGCCCGTCAACCACCACAACTGGGAAGAATTAACTCATAATCTAACACAGAGATAAAACAACACAACTCATAATCTAACACAGATAAAACAACACATTGTAACACTCAATAAAGCACAAGGGGTCTATGGATCATCTAGCGAATTCTGTGCTTAGAACGACATTGTTCTCAAGGTTATAAACCCCGCTTGTTCCACTTCCTGTGTACCATGATGATGTTGTGCTCCCCATCTCTGTGAGGATGAGGCCATCGAGCACTAGCGGCGGTTGTGGGCATTGTTGTACTTCATCTGCCAATGCTAGTCGTCGAAGCTGCTCCGCCACTTGCCTCATTGTTGGCCTTGATGAACTTGGATTAGCCAAGCATTGACTAGCTAGTGATGCTGCCTGACAGATAACTCCCATGTTGGCTTCATCTACTATGTCACTGTCCAGGAGCTCAACGAGTTTGCCACTTTCCATTGCCCCTTGAAATATTGGGATCAAGCTCGTCCGTTCTTTTGAAAGTGGCTTCTTACCCGTTAGGAGCTCAAGAAGAATGACCCCAAAGCTGTATACATCATTCTTGGCTGTGAGCTGGTACTCAAGTAGATAGTCTGGGTCGAGATATCCCGGTGTACCTTTTACAACAGCTTGGGTTTTCTCATCAATCGTTGAGCAACCAAAGTCAGACACCTTTGCAACCAATCCTTCAGCAAGAAGTATGTTGGCTGGCTTCACGTCGCCGTGGAGTATTGGGCGCGGCAGTGAGTGGAGATGTGCAAGTGCATTGGCGGATTCTGCAGCAATCCTTAAGCGGGTCGCCAGTGTGACGTGGAACTTCCTACTCCTTTGGAGGTCCAGTAGCTCTTGCAGTGTCTTGTTCTGCACGAACTCATAGATTAGCATGGGGGCCTCGAACTGCAGGCAGCAGCCGACTAGTTTGACGATATTTGGGTGGTTGACACGACAGAGTATGACCAGCTCCTGCACGAAGTCGGCTCTTCTGCTCTCATCAACCTCGTTGCACCTCTTTATCGCAACAGTGGTGCCGTCGAGGACAGCCTTGTAAACGGTCCCCTGCCCTCCTTTGCCAACAATGTTCTCCTTGGCGAAATTGTTTGTGGCTACCTCGATCTTCTCTCTGTCGTAGAGGGTGAACTCAGCGCTGCTCTCTACTTTCATCAGTTCTAGTAAGATCTGTCCTCCGTGTTGTTGAAAATACATGTCAGTCTGTCTCTGCAGAGCTTGTCTTTTGATACTTCGTTTGTGCTGGATCACTTCTCGTACAAGAAAAACAACGAGGCCAACGATAGCAAAACCGGAAATTCCTGCAGAAATGAATATTTGTAAAGGAGACTAAAGGTTGAATTGAAACAAGTGCTTCAGCACTGCATATACAGATACTGTTTATCTTAAGAAAAAACTTTCAAAATTAAACTGCATGCTTGTGTACTGTACATCCTAAATGCAAAGGCGGGGATGCAATCATCTTCCTATTCCAAATAAATAAGTTAATTACAGGTCGACATCATGTAACGGACTAACGGTTTAGAACTCTATGTAGTTACACTTTCAGTTCTTTTTCTGAAAAGTTCTGAGAGTGACGTATCGGTTGGGGTCCATGACTAATCAAACAGATTAAAATTAGTTTTTGTTTTCTTTTGTGGAGAATCCATATAAACTGGTGTGGAACATGTGGATGCTATGGCCTAACATAAGGAAAATCTTAGCTACTGATTTTTGGATAAGGAAAAAGAACTTGGAATGATAAGCGAGGATAATGGAGTACCAATAGCTACTTTTCCTCCAGTATGAAGGGTTTGATCTCTCTCGCATGTCCCATTGAATGCGTTGCCTTTGGGACGACTGCGAGGGCATAAGCACTCGAACCCGCCAGGAAGATTATGGCAAGTTCCAGGCACGGAACAAGGGTACTTCGGATCCGCACACTCGTCTATATCTGCATTAATCAAACATAGGTAAAAATAAACAGTGATTTGCTATCATATATACATGGGCAATATGATTTTCTTGTGGGAAATTGTGATGTTTTGTGTATTAATCATATATTAATAATATAATGAACCTCAGATTCTGTGACTCATACTAAACTAATCAAAAGATAAAGGCAAAAAAAAAATTCTGATGCATGTTTTCTCTCATAAGCTATGTTAAAAAGTGTAGGGAAATATAGTACATCTTAACTGTCTTGATATTACAACTAAACAAGTTAATTAGATAGATATATATTTTTAATTTATTCCAGGTGTCACCTTCTCGAGGCGAATCGGGTATATTTAAATATTTTTTAATCTAGCTAGTAAATTCCCGTAAAATTGTGATAAAGTATATTTCAAAATTTAATTAGTGTAGTACAAATTTTAAAGTGGTAAAATTGAACTTAAAATAAATATATAGTAATAAAATAATAAATTAAATTGAAAAATCATTCCAAATTACAGTAGATGAATGTTAATTACCTTGCATTGGCTAAACTTTTTAAATGCTTATGATAATCAACTGTTATATATTTCAATTCTGCTAGTAAATGAGTACCGTAAAAGCATTTAAAATCAAGAAATATCCACACCAATTCTCACTTGGCTATGTGATTCATTTGTTTATGTGTATATATTCACGTATACAATTCCTCTCTCACCCTTAAATGGATCAGTTTTCATACCTGTGCAACCGTGCTGCCCGTCCTGCAGGTAGGGGTTACCTTGGTACCCTTCGGAGCAGTTGCAGATGTAGCCTGGTCCGTTGGACGAGTTGAAGCACTTGCTGTTGTGGCTGACACATGCATAGGTGTCAACCTTTCTGCGGGCTTTATCACAAGTCTCGTTTCCGATAGCCCAATCCACCACCAACGGCACCCTGCCACCGTTGCTGCTGTTAAATTCCAGCGAGCTCACGTAGCTCGTCCGGAAGCTGAAGGCCTTCGACTCCATCAGCACCGCGTAGCTGCAGCGGCTGACGTTGTAGATCTCCGAGGTGTTGAAGCCCGTGTCGAACCTGACGCGGTAGTACTTCAGACCCCTGGGGATGGCTGTCTGGCAGCAGCCTATCCCGGAGCACGACCCGTTGGTGGCGAGGCTCGTCAGGTCGCCTCCCTGGCACATGGCGACGCACCCGCTCGTGTACTTGCCCATGTTGTCGTCGTCGGTGATGTACGCCAGCGTCTGGCACCCGACGACGGTGAACTTGTTGTCGGCGTCGGAGATCGTCAGCGGCGTGCCGGTGAAGTTGATCTGCCAGTCGTTGTAGTCCATGTCGCGGGAGCTGGTGTTGTAGCAAGCGGAGGAGATGGAGTTCGTCACCCGGGCCTGCCCGGTCGGCAGGGAGATGCTGAGAACCTCCACATTCCCGTGGAACGGCCTGTAGACGTGGTTGTCGTCGACGTCGCAGTTCAGGTAGAAGCCTGGAACGGCGCAGCCGTCGGACTCGCTGCCGTTCCAGACGCCGAACGGGTAGGGGATGTCTACGTCGCCGCACTTCCTTTGGCAGTTGCCGGGCGGCGGCGGCGGCGGCGGCGCTCGTGCTCCGGCGACGGCGGCATGGAGCCTCGCCGTAGCAGCCGCTACGCCCAGCCATATTGTTACGGCTGATAGTAGCGTGTGGAACTGGAACGCCAT

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CDS seq

ATGGCGTTCCAGTTCCACACGCTACTATCAGCCGTAACAATATGGCTGGGCGTAGCGGCTGCTACGGCGAGGCTCCATGCCGCCGTCGCCGGAGCACGAGCGCCGCCGCCGCCGCCGCCGCCCGGCAACTGCCAAAGGAAGTGCGGCGACGTAGACATCCCCTACCCGTTCGGCGTCTGGAACGGCAGCGAGTCCGACGGCTGCGCCGTTCCAGGCTTCTACCTGAACTGCGACGTCGACGACAACCACGTCTACAGGCCGTTCCACGGGAATGTGGAGGTTCTCAGCATCTCCCTGCCGACCGGGCAGGCCCGGGTGACGAACTCCATCTCCTCCGCTTGCTACAACACCAGCTCCCGCGACATGGACTACAACGACTGGCAGATCAACTTCACCGGCACGCCGCTGACGATCTCCGACGCCGACAACAAGTTCACCGTCGTCGGGTGCCAGACGCTGGCGTACATCACCGACGACGACAACATGGGCAAGTACACGAGCGGGTGCGTCGCCATGTGCCAGGGAGGCGACCTGACGAGCCTCGCCACCAACGGGTCGTGCTCCGGGATAGGCTGCTGCCAGACAGCCATCCCCAGGGGTCTGAAGTACTACCGCGTCAGGTTCGACACGGGCTTCAACACCTCGGAGATCTACAACGTCAGCCGCTGCAGCTACGCGGTGCTGATGGAGTCGAAGGCCTTCAGCTTCCGGACGAGCTACGTGAGCTCGCTGGAATTTAACAGCAGCAACGGTGGCAGGGTGCCGTTGGTGGTGGATTGGGCTATCGGAAACGAGACTTGTGATAAAGCCCGCAGAAAGGTTGACACCTATGCATGTGTCAGCCACAACAGCAAGTGCTTCAACTCGTCCAACGGACCAGGCTACATCTGCAACTGCTCCGAAGGGTACCAAGGTAACCCCTACCTGCAGGACGGGCAGCACGGTTGCACAGATATAGACGAGTGTGCGGATCCGAAGTACCCTTGTTCCGTGCCTGGAACTTGCCATAATCTTCCTGGCGGGTTCGAGTGCTTATGCCCTCGCAGTCGTCCCAAAGGCAACGCATTCAATGGGACATGCGAGAGAGATCAAACCCTTCATACTGGAGGAAAAGTAGCTATTGGAATTTCCGGTTTTGCTATCGTTGGCCTCGTTGTTTTTCTTGTACGAGAAGTGATCCAGCACAAACGAAGTATCAAAAGACAAGCTCTGCAGAGACAGACTGACATGTATTTTCAACAACACGGAGGACAGATCTTACTAGAACTGATGAAAGTAGAGAGCAGCGCTGAGTTCACCCTCTACGACAGAGAGAAGATCGAGGTAGCCACAAACAATTTCGCCAAGGAGAACATTGTTGGCAAAGGAGGGCAGGGGACCGTTTACAAGGCTGTCCTCGACGGCACCACTGTTGCGATAAAGAGGTGCAACGAGGTTGATGAGAGCAGAAGAGCCGACTTCGTGCAGGAGCTGGTCATACTCTGTCGTGTCAACCACCCAAATATCGTCAAACTAGTCGGCTGCTGCCTGCAGTTCGAGGCCCCCATGCTAATCTATGAGTTCGTGCAGAACAAGACACTGCAAGAGCTACTGGACCTCCAAAGGAGTAGGAAGTTCCACGTCACACTGGCGACCCGCTTAAGGATTGCTGCAGAATCCGCCAATGCACTTGCACATCTCCACTCACTGCCGCGCCCAATACTCCACGGCGACGTGAAGCCAGCCAACATACTTCTTGCTGAAGGATTGGTTGCAAAGGTGTCTGACTTTGGTTGCTCAACGATTGATGAGAAAACCCAAGCTGTTGTAAAAGGTACACCGGGATATCTCGACCCAGACTATCTACTTGAGTACCAGCTCACAGCCAAGAATGATGTATACAGCTTTGGGGTCATTCTTCTTGAGCTCCTAACGGGTAAGAAGCCACTTTCAAAAGAACGGACGAGCTTGATCCCAATATTTCAAGGGGCAATGGAAAGTGGCAAACTCGTTGAGCTCCTGGACAGTGACATAGTAGATGAAGCCAACATGGGAGTTATCTGTCAGGCAGCATCACTAGCTAGTCAATGCTTGGCTAATCCAAGTTCATCAAGGCCAACAATGAGGCAAGTGGCGGAGCAGCTTCGACGACTAGCATTGGCAGATGAAGTACAACAATGCCCACAACCGCCGCTAGTGCTCGATGGCCTCATCCTCACAGAGATGGGGAGCACAACATCATCATGGTACACAGGAAGTGGAACAAGCGGGGTTTATAACCTTGAGAACAATGTCGTTCTAAGCACAGAATTCGCTAGATGA

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Protein seq

MAFQFHTLLSAVTIWLGVAAATARLHAAVAGARAPPPPPPPGNCQRKCGDVDIPYPFGVWNGSESDGCAVPGFYLNCDVDDNHVYRPFHGNVEVLSISLPTGQARVTNSISSACYNTSSRDMDYNDWQINFTGTPLTISDADNKFTVVGCQTLAYITDDDNMGKYTSGCVAMCQGGDLTSLATNGSCSGIGCCQTAIPRGLKYYRVRFDTGFNTSEIYNVSRCSYAVLMESKAFSFRTSYVSSLEFNSSNGGRVPLVVDWAIGNETCDKARRKVDTYACVSHNSKCFNSSNGPGYICNCSEGYQGNPYLQDGQHGCTDIDECADPKYPCSVPGTCHNLPGGFECLCPRSRPKGNAFNGTCERDQTLHTGGKVAIGISGFAIVGLVVFLVREVIQHKRSIKRQALQRQTDMYFQQHGGQILLELMKVESSAEFTLYDREKIEVATNNFAKENIVGKGGQGTVYKAVLDGTTVAIKRCNEVDESRRADFVQELVILCRVNHPNIVKLVGCCLQFEAPMLIYEFVQNKTLQELLDLQRSRKFHVTLATRLRIAAESANALAHLHSLPRPILHGDVKPANILLAEGLVAKVSDFGCSTIDEKTQAVVKGTPGYLDPDYLLEYQLTAKNDVYSFGVILLELLTGKKPLSKERTSLIPIFQGAMESGKLVELLDSDIVDEANMGVICQAASLASQCLANPSSSRPTMRQVAEQLRRLALADEVQQCPQPPLVLDGLILTEMGSTTSSWYTGSGTSGVYNLENNVVLSTEFAR

Function Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os04g30010 LOC_Os04g30010.1 Chr04 17906097 17909802 - MSU_osa1r7
CDS seq

ATGGCGTTCCAGTTCCACACGCTACTATCAGCCGTAACAATATGGCTGGGCGTAGCGGCTGCTACGGCGAGGCTCCATGCCGCCGTCGCCGGAGCACGAGCGCCGCCGCCGCCGCCGCCGCCCGGCAACTGCCAAAGGAAGTGCGGCGACGTAGACATCCCCTACCCGTTCGGCGTCTGGAACGGCAGCGAGTCCGACGGCTGCGCCGTTCCAGGCTTCTACCTGAACTGCGACGTCGACGACAACCACGTCTACAGGCCGTTCCACGGGAATGTGGAGGTTCTCAGCATCTCCCTGCCGACCGGGCAGGCCCGGGTGACGAACTCCATCTCCTCCGCTTGCTACAACACCAGCTCCCGCGACATGGACTACAACGACTGGCAGATCAACTTCACCGGCACGCCGCTGACGATCTCCGACGCCGACAACAAGTTCACCGTCGTCGGGTGCCAGACGCTGGCGTACATCACCGACGACGACAACATGGGCAAGTACACGAGCGGGTGCGTCGCCATGTGCCAGGGAGGCGACCTGACGAGCCTCGCCACCAACGGGTCGTGCTCCGGGATAGGCTGCTGCCAGACAGCCATCCCCAGGGGTCTGAAGTACTACCGCGTCAGGTTCGACACGGGCTTCAACACCTCGGAGATCTACAACGTCAGCCGCTGCAGCTACGCGGTGCTGATGGAGTCGAAGGCCTTCAGCTTCCGGACGAGCTACGTGAGCTCGCTGGAATTTAACAGCAGCAACGGTGGCAGGGTGCCGTTGGTGGTGGATTGGGCTATCGGAAACGAGACTTGTGATAAAGCCCGCAGAAAGGTTGACACCTATGCATGTGTCAGCCACAACAGCAAGTGCTTCAACTCGTCCAACGGACCAGGCTACATCTGCAACTGCTCCGAAGGGTACCAAGGTAACCCCTACCTGCAGGACGGGCAGCACGGTTGCACAGATATAGACGAGTGTGCGGATCCGAAGTACCCTTGTTCCGTGCCTGGAACTTGCCATAATCTTCCTGGCGGGTTCGAGTGCTTATGCCCTCGCAGTCGTCCCAAAGGCAACGCATTCAATGGGACATGCGAGAGAGATCAAACCCTTCATACTGGAGGAAAAGTAGCTATTGGAATTTCCGGTTTTGCTATCGTTGGCCTCGTTGTTTTTCTTGTACGAGAAGTGATCCAGCACAAACGAAGTATCAAAAGACAAGCTCTGCAGAGACAGACTGACATGTATTTTCAACAACACGGAGGACAGATCTTACTAGAACTGATGAAAGTAGAGAGCAGCGCTGAGTTCACCCTCTACGACAGAGAGAAGATCGAGGTAGCCACAAACAATTTCGCCAAGGAGAACATTGTTGGCAAAGGAGGGCAGGGGACCGTTTACAAGGCTGTCCTCGACGGCACCACTGTTGCGATAAAGAGGTGCAACGAGGTTGATGAGAGCAGAAGAGCCGACTTCGTGCAGGAGCTGGTCATACTCTGTCGTGTCAACCACCCAAATATCGTCAAACTAGTCGGCTGCTGCCTGCAGTTCGAGGCCCCCATGCTAATCTATGAGTTCGTGCAGAACAAGACACTGCAAGAGCTACTGGACCTCCAAAGGAGTAGGAAGTTCCACGTCACACTGGCGACCCGCTTAAGGATTGCTGCAGAATCCGCCAATGCACTTGCACATCTCCACTCACTGCCGCGCCCAATACTCCACGGCGACGTGAAGCCAGCCAACATACTTCTTGCTGAAGGATTGGTTGCAAAGGTGTCTGACTTTGGTTGCTCAACGATTGATGAGAAAACCCAAGCTGTTGTAAAAGGTACACCGGGATATCTCGACCCAGACTATCTACTTGAGTACCAGCTCACAGCCAAGAATGATGTATACAGCTTTGGGGTCATTCTTCTTGAGCTCCTAACGGGTAAGAAGCCACTTTCAAAAGAACGGACGAGCTTGATCCCAATATTTCAAGGGGCAATGGAAAGTGGCAAACTCGTTGAGCTCCTGGACAGTGACATAGTAGATGAAGCCAACATGGGAGTTATCTGTCAGGCAGCATCACTAGCTAGTCAATGCTTGGCTAATCCAAGTTCATCAAGGCCAACAATGAGGCAAGTGGCGGAGCAGCTTCGACGACTAGCATTGGCAGATGAAGTACAACAATGCCCACAACCGCCGCTAGTGCTCGATGGCCTCATCCTCACAGAGATGGGGAGCACAACATCATCATGGTACACAGGAAGTGGAACAAGCGGGGTTTATAACCTTGAGAACAATGTCGTTCTAAGCACAGAATTCGCTAGATGA

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Protein seq

MAFQFHTLLSAVTIWLGVAAATARLHAAVAGARAPPPPPPPGNCQRKCGDVDIPYPFGVWNGSESDGCAVPGFYLNCDVDDNHVYRPFHGNVEVLSISLPTGQARVTNSISSACYNTSSRDMDYNDWQINFTGTPLTISDADNKFTVVGCQTLAYITDDDNMGKYTSGCVAMCQGGDLTSLATNGSCSGIGCCQTAIPRGLKYYRVRFDTGFNTSEIYNVSRCSYAVLMESKAFSFRTSYVSSLEFNSSNGGRVPLVVDWAIGNETCDKARRKVDTYACVSHNSKCFNSSNGPGYICNCSEGYQGNPYLQDGQHGCTDIDECADPKYPCSVPGTCHNLPGGFECLCPRSRPKGNAFNGTCERDQTLHTGGKVAIGISGFAIVGLVVFLVREVIQHKRSIKRQALQRQTDMYFQQHGGQILLELMKVESSAEFTLYDREKIEVATNNFAKENIVGKGGQGTVYKAVLDGTTVAIKRCNEVDESRRADFVQELVILCRVNHPNIVKLVGCCLQFEAPMLIYEFVQNKTLQELLDLQRSRKFHVTLATRLRIAAESANALAHLHSLPRPILHGDVKPANILLAEGLVAKVSDFGCSTIDEKTQAVVKGTPGYLDPDYLLEYQLTAKNDVYSFGVILLELLTGKKPLSKERTSLIPIFQGAMESGKLVELLDSDIVDEANMGVICQAASLASQCLANPSSSRPTMRQVAEQLRRLALADEVQQCPQPPLVLDGLILTEMGSTTSSWYTGSGTSGVYNLENNVVLSTEFAR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.053534 0.057660 0.364482

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0368800 RBH 0.092304 0.094660 1.559312
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g30060 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os04g0368800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0009950 RBH 0.0 0.0 0.674895
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0010710 RBH 0.000000 0.0 0.316431
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0010500 RBH 0.0 2.579199 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0010110 SBH 0.000000 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0010340 SBH 0.462691 0.000000 2.106792
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0294000 RBH 0.41305 0.364212 0.0104925
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0010010 RBH 0.0 0.000000 0.302550
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0281200 SBH 0.345818 0.308578 0.044118
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0010130 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0010200 RBH 0.0 1.197872 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0010250 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0010750 RBH 0.000000 0.0 0.304672
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0010270 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G009400 RBH 0.0 0.0 0.281622
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0009440 SBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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