Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0010130 | OGI:04058110 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:19335421-19341925 | ||||||||
| Gene Symbol | WAK45, OsWAK45, OsRLCK143, RLCK143 | ||||||||||
| DNA seq | tttgatgcacttgaattattatatattgtgaaacatgattgtttcacttgttcctcacaatgcatggttacaaccgcacacattgggaagcccgtcaaccaccacaactgggaagaattaactcataatctaacacagagataaaacaacacaactcataatctaacacagataaaacaacacattgtaacactcaataaagcacaaggggtctatggatcatctagcgaattctgtgcttagaacgacattgttctcaaggttataaaccccgcttgttccacttcctgtgtaccatgatgatgttgtgctccccatctctgtgaggatgaggccatcgagcattagcggcggttgtaggcattgttgtacttcatctgccaatgctagtcgtcgaagctgctccgccacttgcctcattgttggccttgatgaacttggattagccaagcattgactagctagtgatgctgcctgacagataactcccatgttggcttcatctactatgtcactgtccaggagctcaacgagtttgccactttccattgccccttgaaatattgggatcaagctcgtccgttcttttgaaagtggcttcttaccggttaggagctcaagaagaatgaccccaaagctgtatacatcattcttggctgtgagctggaactcaagtagatagtctgggtcgagatatcccggtgtaccttttacaacagcttgggttttctcatcaatcgttgagcaaccaaagtcagacacctttgcaaccaatccttcagcaaaaagtatgttggctggcttcacgtcgccgtggagtattgggcgcggcagtgagtggagatgtgcaagtgcattggcggattctgcagcaatccttaagcgggtcgccagtgtgacgtggaacttcctactcctttggaggtccAGTagctcttgcagtgtcttgttctgcacgaactcatagattagcatgcgggcctcgaactgcaggcagcagctgtcacgcccggaatttctatccaaaattccaaacgcttacatgtgtgttaatccctcgtccaggaatcaaccgaggcacacaatgacaatattgataatagagtacaaatactcacgaataataaattattacagaggtagatagctcctcctaaagaaaataacattctacgcagcggaaaattaaactataacaatctacggaacagcgacggcaactccactccacaggcaacttaaccagaacaagcctaatcctccagatcatcaccttcactgaagtactcctcttctgatgaatgaatattgcaagaatgagcatatgacatactcaacaagccacacagcaaatatgcaagtgcacaggataacaaaggatggcatagtatagttcatttgcagaaaacagcatttaataaatatttaagagaatagtaaaacagttgtatAattaatcaatattaaataaacaccatacaacacacccgtgttgcataggcccaaccacatttgaacaaccaaccccggttgaacaaattaaaccctccaaaccaggaattatccattccaaaccaggaattatgttatcacattattaccattaatgagtagtgtgagactaatcacgaaaaacattgctcaactcacccatcaccgcgggtacggctattcgaatagtttaaactctgatcagaggtgtaccactgtacccacaagacacaaccccacatcatgttaccatgtgcctcagtaccaccacgatacctcggaaaggaattgtgacaatacccctcgcataacacaattcaccacagtgcaccgtacctggatcataatcaccccctttaaaacaaggcatggactccccagcgacccccatggacttctcgccacttctcagtcTGAtgcactataatgaatcatgctatacaaaagataaagccgttgcccacgctggcttgtggttggcacgataaatgtttcacaacagtagctcgcgaaccggtccttaattgtcatgagcacaaccatcaaaaccatatgctcacaacccaccttaatcaggttttaattatcaattaattaacatcacacgattgaccatcgtgagctaccattaaatataaccattgttaacagtaataattaagtaatacaattaaccccttttagttagctaatatttctaagcatggctaagcaaacctatacatagcatttagctgaaccaatccaatatataaggttcatgctaatcaaattataacccataggaaaataaagtcatcttcggccattatttaattgggaaaggttcaccacccgatgacattcgaaaacaatgcatagttgaaataaaataatagctttaaatgggatcaacatgctcaaagggttgtttgggatctgtgtgacttgccttgagcttccacaaacgcttcggaaccttcctcaacggaaacactctcctccggaacgtcggaaactaaagcaaataaacaaaatcaacaaaacagtacaaaaacaagcataaacagtacatgtggataTttttatcatgtagatcttgattttagaaaaatttagaaacttgaaccacctaaaacggatctacggtTAtttagttatgattttccaaagttttaatctattagaaaatcgggaaaaaggaaaaagagagagagatgacgtcagccctggcgaagatgacgtcagccctagggttgacgtcggcatgacgtcagcgacggcggccggctcgggcacgcgagctcgccggcgctagggacatcggcggcgggattggagaccatctacgcgtagagggcaacgaggcgaacccgttggtactcaccacgtagtcaaaggatgcacgacggcggccggcgacgaagaagaaggcggcggcggctcgggttagcggcgacggcggcgctccggtggtcggcgacgcaaacggaggggcggccgagcttctccacaccacggcgcacctaacggcggtggcggcgaccaaaggcgacggcggagacggcggcgcgacgcgaccgaagatggccgacggcggcggcggacttcgtgcacgcggcggcgacgctacggggcacgggagagcacgggaaagggggcaaacggaagaggagaacacgaggaagctttatatggcattggattgaagagatcgagctccaaacgggaggaatcgagtcgggaagatctcggactcggtttttagagataaaacaaaacgaactcgattcgaacccaaatcgcaacgattcgttttgattcttgggggaaaagaaagaggagaccgagaggaacaaaacccctcaatcaattggaaaagacgaggtcggatttggccggaaacggcggcgcaaaacgacgctagggttcggcacggcggcgcggcggccggaggtaggagacgggcctgacaggtgggccccacctgtcagcctccgcgagagaGgggcgtgggcgcgggcggcttgggccggcatgggccgcgcgcggaggagagagaggaaagagagagttgggccgaattcggcccaaggaccaagaaggggaacttttgaacttttttgaataaaacaatttgtaaaatgttgttttaattattaaaaatacttcccttgctcaaataattcccagaaaattctagaaaatagaggagcaagcatagtatttaataaaattttatctagctcatttttatgttgaaaattttcctagaaaattagggtttagcttgtaggcttttaaaataatttctaaaaaattccaattaatcaacaatttatatatttaagattttcagggtgtgacacagccgactagtttgacgacatttgggtggttgacacgacagagtatgaccagctcctgcacgaagtcggctcttctgctctcatcaacctcgttgcacctctttatcgcaacagtggtgccgtcgaggacagccttgtaaacggtcccctgccctcctttgccaacaatgttctccttggcgaaattgtttgtggctacctcgatcttctctctgtcgtagagggtgaagtcagcgctgctctctactttcatcagttctagtaagatctgtcctccgtgttgttgaaaatacatgtcagtctgtctctgcagagcttgtcttttgatacttcgtttgtgctggatcacttctcgtacaagaaaaacaacgaggccaacgatagcaaaaccggaacttcctgcagaaatgaatatttgtaaaggagactaaaggttgaattgaaacaagtgcttcagcactacatatacagatactgcttatcttaagaaaaaactttcaaaattaaactgcatgcttgtgtactgtacatcataaatgcaaaggcggagatgcaatcatcttcctattccaaaaaaataagttaattacaggtcgacatcatgtaacggactaacggtttagaactctatgtagttacactttcagttctttttctgaaaagttctgagagtgatgtatcggttgggatccatgactaatcaaacagattaaaattagtttttgttttcttttgtggagaatccatataaactggtgtggaacatgtggatgctatggcctaacataaggaaaatcttagctactgatttttggataaaggaaaaagaacttggaatgataagcgaggataatggagtaccaatagctacttttcctccagtatgaagggtttgatctctctcgcatgtcccattgagtgcgttgcctttgggacgactgcgagggcataagcactcgaacccgccaggaagattatggcaagttccaggcacggaacaagggtacttcggatccgcacactcgtctatatctgcattaatcaaacataggtaaaaataaacagtgatttgctatcatatatacatgggcaatatgattttcttgtgggaaattgtgatgttttgtgtattaatcatatattaataatataatgaacctcagattctgtgactcatactaaactaatcagaagataaaggcaaaaaaaaaaaatttctgatgCatgttttctctcaaaagctatgttaaaaattgtagggaaatatagtacaccttaactgtcttgatattacaactaaacaagttaattagatagatatatatttttaatttattccaggtgtcaccttctcgtggcgaatcgggtatattgaaatatttttaatatagtaaattcccgtaaaattgtgataaagtacgtttcaaattttaattagtgtagctagtacaaattttaaagtggtaaaattgaacttaaaataaatatatgataataaaatagtaaattaaattgaaaaatcattccaaattacagtagatgaatgttaattaagttggctaaactttttaaatgcttatgataatcaactgttataattcaattctgctagtaaaagagtaccgtaaaggcatttaaaatcaaaaaatccacaccaattctcacttggctatgtgattgatttgtttagatggatcagttttcatacctgtgcaaccgtgctgcccgtcctgcaggtaggggttaccttggtacccttcggagcatttgcagatgtagcctggtccgttgggcgagttgaagcactcgctgttgtcgctgacacatgcataggtgtcaacctttccgcgggctttatcacaagtatcgtttccgatagcccaatccaccaccaacggcgccctgccactgttgctgctgttaaaTtccagcgagctcacgtagctcgtccggaagctgaaggccttggactccatgagcaccgcgtagctgcagcggctgacgttgtagatctccgacgtgttgaagcccgtgtcgaacctgacgcggtagtacttcagacccctggggatggccgtctggcagcagcctatCccggagcacgacccgttgttggcaaggctcgtcgtcaggtcgcctccctggcacatggcgacgcacccgcttgtgtacctgcccatgttgtcgtcgtcggtgatgtacgccagcgtctggcacccgacgaccgtgaacttgttgccggcgtcggagatcgtcagcggcgtgccggtgaagttgatctgccagtcgttgtagtccatgtcgcgggagctcgtgttgtagcaagcggaggagatggagttcatcacccgggcctgcccggtcggcagggagatgctgcgaacctccacattaccgtggaacggcctgtagacgtggttgccggtgtcgtcgtcgacgtcgttgcagttcaggtagaagcctggaacggcgcagccggcggactcgctgccgttccagacgccgaactggtaggggatgtctacgtcgccgcacttcctttggcagctgccgggcggcggcggcgctcgtgctccggcgacggcggcatggagcctcgccgtagcagccgctacgcccagccatattgttacggctgatagtagcgtgtggaactggaacgccat
More
|
||||||||||
| CDS seq | atggcgttccagttccacacgctactatcagccgtaacaatatggctgggcgtagcggctgctacggcgaggctccatgccgccgtcgccggagcacgagcgccgccgccgcccggcagctgccaaaggaagtgcggcgacgtagacatcccctaccagttcggcgtctggaacggcagcgagtccgccggctgcgccgttccaggcttctacctgaactgcaacgacgtcgacgacgacaccggcaaccacgtctacaggccgttccacggtaatgtggaggttcgcagcatctccctgccgaccgggcaggcccgggtgatgaactccatctcctccgcttgctacaacacgagctcccgcgacatggactacaacgactggcagatcaacttcaccggcacgccgctgacgatctccgacgccggcaacaagttcacggtcgtcgggtgccagacgctggcgtacatcaccgacgacgacaacatgggcaggtacacaagcgggtgcgtcgccatgtgccagggaggcgacctgacgacgagccttgccaacaacgggtcgtgctccggGataggctgctgccagacggccatccccaggggtctgaagtactaccgcgtcaggttcgacacgggcttcaacacgtcggagatctacaacgtcagccgctgcagctacgcggtgctcatggagtccaaggccttcagcttccggacgagctacgtgagctcgctggaAtttaacagcagcaacagtggcagggcgccgttggtggtggattgggctatcggaaacgatacttgtgataaagcccgcggaaaggttgacacctatgcatgtgtcagcgacaacagcgagtgcttcaactcgcccaacggaccaggctacatctgcaaatgctccgaagggtaccaaggtaacccctacctgcaggacgggcagcacggttgcacagatatagacgagtgtgcggatccgaagtacccttgttccgtgcctggaacttgccataatcttcctggcgggttcgagtgcttatgccctcgcagtcgtcccaaaggcaacgcactcaatgggacatgcgagagagatcaaacccttcatactggaggaaaagtagctattggaagttccggttttgctatcgttggcctcgttgtttttcttgtacgagaagtgatccagcacaaacgaagtatcaaaagacaagctctgcagagacagactgacatgtattttcaacaacacggaggacagatcttactagaactgatgaaagtagagagcagcgctgacttcaccctctacgacagagagaagatcgaggtagccacaaacaatttcgccaaggagaacattgttggcaaaggagggcaggggaccgtttacaaggctgtcctcgacggcaccactgttgcgataaagaggtgcaacgagacactgcaagagctACTggacctccaaaggagtaggaagttccacgtcacactggcgacccgcttaaggattgctgcagaatccgccaatgcacttgcacatctccactcactgccgcgcccaatactccacggcgacgtgaagccagccaacatactttttgctgaaggattggttgcaaaggtgtctgactttggttgctcaacgattgatgagaaaacccaagctgttgtaaaaggtacaccgggatatctcgacccagactatctacttgagttccagctcacagccaagaatgatgtatacagctttggggtcattcttcttgagctcctaaccggtaagaagccactttcaaaagaacggacgagcttgatcccaatatttcaaggggcaatggaaagtggcaaactcgttgagctcctggacagtgacatagtagatgaagccaacatgggagttatctgtcaggcagcatcactagctagtcaatgcttggctaatccaagttcatcaaggccaacaatgaggcaagtggcggagcagcttcgacgactagcattggcagatgaagtacaacaatgcctacaaccgccgctaatgctcgatggcctcatcctcacagagatggggagcacaacatcatcatggtacacaggaagtggaacaagcggggtttataaccttgagaacaatgtcgttctaagcacagaattcgctagatga
More
|
||||||||||
| Protein seq | MAFQFHTLLSAVTIWLGVAAATARLHAAVAGARAPPPPGSCQRKCGDVDIPYQFGVWNGSESAGCAVPGFYLNCNDVDDDTGNHVYRPFHGNVEVRSISLPTGQARVMNSISSACYNTSSRDMDYNDWQINFTGTPLTISDAGNKFTVVGCQTLAYITDDDNMGRYTSGCVAMCQGGDLTTSLANNGSCSGIGCCQTAIPRGLKYYRVRFDTGFNTSEIYNVSRCSYAVLMESKAFSFRTSYVSSLEFNSSNSGRAPLVVDWAIGNDTCDKARGKVDTYACVSDNSECFNSPNGPGYICKCSEGYQGNPYLQDGQHGCTDIDECADPKYPCSVPGTCHNLPGGFECLCPRSRPKGNALNGTCERDQTLHTGGKVAIGSSGFAIVGLVVFLVREVIQHKRSIKRQALQRQTDMYFQQHGGQILLELMKVESSADFTLYDREKIEVATNNFAKENIVGKGGQGTVYKAVLDGTTVAIKRCNETLQELLDLQRSRKFHVTLATRLRIAAESANALAHLHSLPRPILHGDVKPANILFAEGLVAKVSDFGCSTIDEKTQAVVKGTPGYLDPDYLLEFQLTAKNDVYSFGVILLELLTGKKPLSKERTSLIPIFQGAMESGKLVELLDSDIVDEANMGVICQAASLASQCLANPSSSRPTMRQVAEQLRRLALADEVQQCLQPPLMLDGLILTEMGSTTSSWYTGSGTSGVYNLENNVVLSTEFAR |
||||||||||
| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0010130 | OsLima_04g0010130.01 | Chr04 | 19335421 | 19341925 | - | NAM | ||
| CDS seq | atggcgttccagttccacacgctactatcagccgtaacaatatggctgggcgtagcggctgctacggcgaggctccatgccgccgtcgccggagcacgagcgccgccgccgcccggcagctgccaaaggaagtgcggcgacgtagacatcccctaccagttcggcgtctggaacggcagcgagtccgccggctgcgccgttccaggcttctacctgaactgcaacgacgtcgacgacgacaccggcaaccacgtctacaggccgttccacggtaatgtggaggttcgcagcatctccctgccgaccgggcaggcccgggtgatgaactccatctcctccgcttgctacaacacgagctcccgcgacatggactacaacgactggcagatcaacttcaccggcacgccgctgacgatctccgacgccggcaacaagttcacggtcgtcgggtgccagacgctggcgtacatcaccgacgacgacaacatgggcaggtacacaagcgggtgcgtcgccatgtgccagggaggcgacctgacgacgagccttgccaacaacgggtcgtgctccggGataggctgctgccagacggccatccccaggggtctgaagtactaccgcgtcaggttcgacacgggcttcaacacgtcggagatctacaacgtcagccgctgcagctacgcggtgctcatggagtccaaggccttcagcttccggacgagctacgtgagctcgctggaAtttaacagcagcaacagtggcagggcgccgttggtggtggattgggctatcggaaacgatacttgtgataaagcccgcggaaaggttgacacctatgcatgtgtcagcgacaacagcgagtgcttcaactcgcccaacggaccaggctacatctgcaaatgctccgaagggtaccaaggtaacccctacctgcaggacgggcagcacggttgcacagatatagacgagtgtgcggatccgaagtacccttgttccgtgcctggaacttgccataatcttcctggcgggttcgagtgcttatgccctcgcagtcgtcccaaaggcaacgcactcaatgggacatgcgagagagatcaaacccttcatactggaggaaaagtagctattggaagttccggttttgctatcgttggcctcgttgtttttcttgtacgagaagtgatccagcacaaacgaagtatcaaaagacaagctctgcagagacagactgacatgtattttcaacaacacggaggacagatcttactagaactgatgaaagtagagagcagcgctgacttcaccctctacgacagagagaagatcgaggtagccacaaacaatttcgccaaggagaacattgttggcaaaggagggcaggggaccgtttacaaggctgtcctcgacggcaccactgttgcgataaagaggtgcaacgagacactgcaagagctACTggacctccaaaggagtaggaagttccacgtcacactggcgacccgcttaaggattgctgcagaatccgccaatgcacttgcacatctccactcactgccgcgcccaatactccacggcgacgtgaagccagccaacatactttttgctgaaggattggttgcaaaggtgtctgactttggttgctcaacgattgatgagaaaacccaagctgttgtaaaaggtacaccgggatatctcgacccagactatctacttgagttccagctcacagccaagaatgatgtatacagctttggggtcattcttcttgagctcctaaccggtaagaagccactttcaaaagaacggacgagcttgatcccaatatttcaaggggcaatggaaagtggcaaactcgttgagctcctggacagtgacatagtagatgaagccaacatgggagttatctgtcaggcagcatcactagctagtcaatgcttggctaatccaagttcatcaaggccaacaatgaggcaagtggcggagcagcttcgacgactagcattggcagatgaagtacaacaatgcctacaaccgccgctaatgctcgatggcctcatcctcacagagatggggagcacaacatcatcatggtacacaggaagtggaacaagcggggtttataaccttgagaacaatgtcgttctaagcacagaattcgctagatga
More
|
|||||||
| Protein seq | MAFQFHTLLSAVTIWLGVAAATARLHAAVAGARAPPPPGSCQRKCGDVDIPYQFGVWNGSESAGCAVPGFYLNCNDVDDDTGNHVYRPFHGNVEVRSISLPTGQARVMNSISSACYNTSSRDMDYNDWQINFTGTPLTISDAGNKFTVVGCQTLAYITDDDNMGRYTSGCVAMCQGGDLTTSLANNGSCSGIGCCQTAIPRGLKYYRVRFDTGFNTSEIYNVSRCSYAVLMESKAFSFRTSYVSSLEFNSSNSGRAPLVVDWAIGNDTCDKARGKVDTYACVSDNSECFNSPNGPGYICKCSEGYQGNPYLQDGQHGCTDIDECADPKYPCSVPGTCHNLPGGFECLCPRSRPKGNALNGTCERDQTLHTGGKVAIGSSGFAIVGLVVFLVREVIQHKRSIKRQALQRQTDMYFQQHGGQILLELMKVESSADFTLYDREKIEVATNNFAKENIVGKGGQGTVYKAVLDGTTVAIKRCNETLQELLDLQRSRKFHVTLATRLRIAAESANALAHLHSLPRPILHGDVKPANILFAEGLVAKVSDFGCSTIDEKTQAVVKGTPGYLDPDYLLEFQLTAKNDVYSFGVILLELLTGKKPLSKERTSLIPIFQGAMESGKLVELLDSDIVDEANMGVICQAASLASQCLANPSSSRPTMRQVAEQLRRLALADEVQQCLQPPLMLDGLILTEMGSTTSSWYTGSGTSGVYNLENNVVLSTEFAR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0368800 | RBH | 0.092304 | 0.094660 | 1.559312 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30010 | RBH | 0.053534 | 0.057660 | 0.364482 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0368800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009950 | RBH | 0.0 | 0.0 | 0.674895 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010710 | RBH | 0.000000 | 0.0 | 0.316431 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010500 | RBH | 0.0 | 2.579199 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010110 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010340 | RBH | 0.462691 | 0.000000 | 2.106792 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0294000 | RBH | 0.41305 | 0.364212 | 0.0104925 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010010 | RBH | 0.0 | 0.000000 | 0.302550 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0281200 | SBH | 0.345818 | 0.308578 | 0.044118 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | SBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010200 | RBH | 0.0 | 1.197872 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010250 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010750 | RBH | 0.000000 | 0.0 | 0.304672 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010270 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009400 | RBH | 0.0 | 0.0 | 0.281622 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009440 | RBH | 0.0 | 0.0 | 0.000000 |
