Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_02G0534800 | OGI:02087520 | 11/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr02:32187178-32188217 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGGCCTAAATCGTGTGTCTCGTTCAAAGGAAGGAATAAGTTCACATTGGGTCCCTCTATTTGTCGCCCAATTCGATTTTCATCCCTCGACCGTAAAACCGGGTACAAACCGTCTCCCAACTTATAAAACCGGGTAAATGTGGTCCTATGGCACTATGGCACTACGGAGGGCGGTATTGGCCTACGTGGCACATTGACCATCCTACGTGGTGCGCTGACCACGTTTCTCCTCTCTGTTTTACAGCGTCGCGCACGCACCAGTGGTCCTCGCGGCGGAGCGGGAGCAGCGTTGGATGGCGGGAGCGGCCGCCGCGGCGCTCGCGGCGGAGGACGGCGGAGCGCGGCCCATTCGAGCACGAAGATGGCGGCGCCGAGGCCGCCGACGAGCTTGAGGATGACCTCGCCGTCCTCCTCCCGGACGTAGGACCGCAGCTCGGCGAGGAAGTCGCCGGCCTGCGTGAAGGTGAGCAGCGCGGTGGCGCCCTGGAAGATGGCGGTGACTACGGCGGGAGCGGGAGCAGCGGAGTATACTCACCCAACACCAGGTTCAAGTCGCTCATGTAAGTTTCTCCGCCATGAATCACCTGGTCCATGGCATGCTGTTTGATTGATTTTTGTGACTGTTCTGATGTTTTGTTCGTCTTCTTCTGTTTCCAGTTCCACCTCCTGAAGCAGAGGCAGCTGTTGAAGCAACAACGGGAGCAGCAGCTCGCCGCGGCAACAGTGGCGACGTGGGGCACGCACCGCGCCGGCGTCGGCCCGCCGCTTGGTCTGAACTCGTCCGGCTGGCCGCCGCTGCAGAAGTCCCACCAGCAGGCGTCGTCCGCGGCTGGCATGCGCGCCGTGTTCCTCAGCCCTCCAGGAGGCAAACCGGAACGCACGGGCAACGGCATGCACGCCGTCCTCCTCCCGGACGTAGGACTGCAGCTCGGCGAGGAAGTCGCCGGTCCGCGTGAAGGCGAGCAGCGCGGCGGCGCCCTGGAAGATGGCGATGAGGACGGCGGGAGCGGGAGCAGCGGAGGACGACGAGGACGGAGGTAG
More
|
||||||||||
| CDS seq | ATGGCACTATGGCACTACGGAGGGCGGTATTGGCCTACGTGGCACATTGACCATCCTACGTGGTGCGCTGACCACGTTTCTCCTCTCTGTTTTACAGCGTCGCGCACGCACCAGTGGTCCTCGCGGCGGAGCGGGAGCAGCGTTGGATGGCGGGAGCGGCCGCCGCGGCGCTCGCGGCGGAGGACGGCGGAGCGCGGCCCATTCGAGCACGAAGATGGCGGCGCCGAGGCCGCCGACGAGCTTGAGGATGACCTCGCCGTCCTCCTCCCGGACGTAGGACCGCAGCTCGGCGAGGAAGTCGCCGGCCTGCGTGAAGGTGAGCAGCGCGGTGGCGCCCTGGAAGATGGCGGTGACTACGGCGGGAGCGGGAGCAGCGGATTCCACCTCCTGAAGCAGAGGCAGCTGTTGAAGCAACAACGGGAGCAGCAGCTCGCCGCGGCAACAGTGGCGACGTGGGGCACGCACCGCGCCGGCGTCGGCCCGCCGCTTGGTCTGAACTCGTCCGGCTGGCCGCCGCTGCAGAAGTCCCACCAGCAGGCGTCGTCCGCGGCTGGCATGCGCGCCGTGTTCCTCAGCCCTCCAGGAGGCAAACCGGAACGCACGGGCAACGGCATGCACGCCGTCCTCCTCCCGGACGTAGGACTGCAGCTCGGCGAGGAAGTCGCCGGTCCGCGTGAAGGCGAGCAGCGCGGCGGCGCCCTGGAAGATGGCGATGAGGACGGCGGGAGCGGGAGCAGCGGAGGACGACGAGGACGGAGGTAG
More
|
||||||||||
| Protein seq | MALWHYGGRYWPTWHIDHPTWCADHVSPLCFTASRTHQWSSRRSGSSVGWRERPPRRSRRRTAERGPFEHEDGGAEAADELEDDLAVLLPDVGPQLGEEVAGLREGEQRGGALEDGGDYGGSGSSGFHLLKQRQLLKQQREQQLAAATVATWGTHRAGVGPPLGLNSSGWPPLQKSHQQASSAAGMRAVFLSPPGGKPERTGNGMHAVLLPDVGLQLGEEVAGPREGEQRGGALEDGDEDGGSGSSGGRRGRR |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_02G0534800 | OsZS97_02T0534800.1 | Chr02 | 32187178 | 32188217 | + | makerRMon | ||
| CDS seq | ATGGCACTATGGCACTACGGAGGGCGGTATTGGCCTACGTGGCACATTGACCATCCTACGTGGTGCGCTGACCACGTTTCTCCTCTCTGTTTTACAGCGTCGCGCACGCACCAGTGGTCCTCGCGGCGGAGCGGGAGCAGCGTTGGATGGCGGGAGCGGCCGCCGCGGCGCTCGCGGCGGAGGACGGCGGAGCGCGGCCCATTCGAGCACGAAGATGGCGGCGCCGAGGCCGCCGACGAGCTTGAGGATGACCTCGCCGTCCTCCTCCCGGACGTAGGACCGCAGCTCGGCGAGGAAGTCGCCGGCCTGCGTGAAGGTGAGCAGCGCGGTGGCGCCCTGGAAGATGGCGGTGACTACGGCGGGAGCGGGAGCAGCGGATTCCACCTCCTGAAGCAGAGGCAGCTGTTGAAGCAACAACGGGAGCAGCAGCTCGCCGCGGCAACAGTGGCGACGTGGGGCACGCACCGCGCCGGCGTCGGCCCGCCGCTTGGTCTGAACTCGTCCGGCTGGCCGCCGCTGCAGAAGTCCCACCAGCAGGCGTCGTCCGCGGCTGGCATGCGCGCCGTGTTCCTCAGCCCTCCAGGAGGCAAACCGGAACGCACGGGCAACGGCATGCACGCCGTCCTCCTCCCGGACGTAGGACTGCAGCTCGGCGAGGAAGTCGCCGGTCCGCGTGAAGGCGAGCAGCGCGGCGGCGCCCTGGAAGATGGCGATGAGGACGGCGGGAGCGGGAGCAGCGGAGGACGACGAGGACGGAGGTAG
More
|
|||||||
| Protein seq | MALWHYGGRYWPTWHIDHPTWCADHVSPLCFTASRTHQWSSRRSGSSVGWRERPPRRSRRRTAERGPFEHEDGGAEAADELEDDLAVLLPDVGPQLGEEVAGLREGEQRGGALEDGGDYGGSGSSGFHLLKQRQLLKQQREQQLAAATVATWGTHRAGVGPPLGLNSSGWPPLQKSHQQASSAAGMRAVFLSPPGGKPERTGNGMHAVLLPDVGLQLGEEVAGPREGEQRGGALEDGDEDGGSGSSGGRRGRR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.196045 | 1.8232305 | 0.047529 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0738300 | RBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g29700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0738300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0032960 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0032550 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0032680 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0258100 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0032460 | RBH | 0.072476 | 0.000000 | 0.167191 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0277500 | RBH | 0 | 0.008561 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0032520 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0032700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032330 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033020 | RBH | 0.0 | 1.423455 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0032750 | RBH | 0.0 | 0.0 | 0.000000 |
