Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsNaBo_02g0032750 | OGI:02087520 | 11/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:32766721-32767955 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | gcggcggagcgggagcagcgttggatggcgggagcggccgccgcggcgctcgcggcggaggatggcggagcgcggcccattcgagcacgaagatggcggcgccgaggccgctgacgagcttgaggatgacctcgccgtcctcctcccggacgtaggaccgcagctcggcgaggaagtcgccggcctgcgtgaaggcgagcagcgcggtggcgccctggaagatggcggtgactacggcgggagcgggagcagcggagtatactcacccaacaccaggttcaagtcgctcatgtaagtttctccgccatgaatcacctggtccatggcatgctgtttgattgatttttgtgactgttctgatgttttgttcgtcttcttctgtttccagttccacctcctgaagcagaggcagctgttgaagcaacaacgggagcagcagctcgccgcggcaacagcggcgacgtggggcacgcaccgcgccggcgtcggcccgccgcttggtctgaactcgtccggctggccgccgctgcagaagtcccaccagcaggcgtcgtccgcggtcggcatgcgcgccgtgttcctcagccctccaggaggcaaaccggaacgcacgggcaacggcatgcacgccgtcctcctcccgtccgcgtgaaggcgagcagcgcggcggcgccctggaagatggcgatgaggacggcgggagcgggagcagcggaggacgacgaggacggaggtagcggccgccgcggcgcttgcggtggaggacggcgaggacatagaagccggaaccctcgtgcggacggccgcggtgaggtcggtcccctcctagagggggacgcggcgcgcacggcatgggcgcgcgagcgaggccaagatctgctgccgcacgaggcccacccggtcggcgacgacgacccgcagcttgcggacgccgaggaagggctggacggtgacggtgccgaggtcgacggtttggtcgccgtcgacgaagacgacgggcagcacggccttgggcggcggcggccgcgtgctggtggttgagcggcgcggcgcgcccgcggagtcagaagacgcaacgaggaagaagagggagaaagggaatgatatgtggggcccacgtgggcccaccatatttattttttgtcgctgacatgtaggcccatgtgggccccctattttaaaattattcttttgtgtgctgctgacaggtggggccatagtttttattgtttttt
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CDS seq | atggcggagcgcggcccattcgagcacgaagatggcggcgccgaggccgctgacgagcttgaggatgacctcgccgtcctcctcccggacgtaggaccgcagctcggcgaggaagtcgccggcctgcgtgaaggcgagcagcgcggtggcgccctggaagatggcggtgactacggcgggagcgggagcagcggattccacctcctgaagcagaggcagctgttgaagcaacaacgggagcagcagctcgccgcggcaacagcggcgacgtggggcacgcaccgcgccggcgtcggcccgccgcttggtctgaactcgtccggctggccgccgctgcagaagtcccaccagcaggcgtcgtccgcggtcggcatgcgcgccgtgttcctcagccctccaggaggcaaaccggaacgcacgggcaacggcatgcacgccgtcctcctcccgtccgcgtga
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Protein seq | MAERGPFEHEDGGAEAADELEDDLAVLLPDVGPQLGEEVAGLREGEQRGGALEDGGDYGGSGSSGFHLLKQRQLLKQQREQQLAAATAATWGTHRAGVGPPLGLNSSGWPPLQKSHQQASSAVGMRAVFLSPPGGKPERTGNGMHAVLLPSA |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNaBo_02g0032750 | OsNaBo_02g0032750.01 | Chr02 | 32766782 | 32767372 | + | NAM | ||
CDS seq | atggcggagcgcggcccattcgagcacgaagatggcggcgccgaggccgctgacgagcttgaggatgacctcgccgtcctcctcccggacgtaggaccgcagctcggcgaggaagtcgccggcctgcgtgaaggcgagcagcgcggtggcgccctggaagatggcggtgactacggcgggagcgggagcagcggattccacctcctgaagcagaggcagctgttgaagcaacaacgggagcagcagctcgccgcggcaacagcggcgacgtggggcacgcaccgcgccggcgtcggcccgccgcttggtctgaactcgtccggctggccgccgctgcagaagtcccaccagcaggcgtcgtccgcggtcggcatgcgcgccgtgttcctcagccctccaggaggcaaaccggaacgcacgggcaacggcatgcacgccgtcctcctcccgtccgcgtga
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Protein seq | MAERGPFEHEDGGAEAADELEDDLAVLLPDVGPQLGEEVAGLREGEQRGGALEDGGDYGGSGSSGFHLLKQRQLLKQQREQQLAAATAATWGTHRAGVGPPLGLNSSGWPPLQKSHQQASSAVGMRAVFLSPPGGKPERTGNGMHAVLLPSA |
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNaBo_02g0032750 | OsNaBo_02g0032750.02 | Chr02 | 32766721 | 32767955 | + | IsoSeq | ||
CDS seq | ggcggagcgggagcagcgttggatggcgggagcggccgccgcggcgctcgcggcggaggatggcggagcgcggcccattcgagcacgaagatggcggcgccgaggccgctgacgagcttgaggatgacctcgccgtcctcctcccgg |
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Protein seq | GGAGAALDGGSGRRGARGGGWRSAAHSSTKMAAPRPLTSLRMTSPSSSR |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
A5 | Chr02 | 32766976 | 32767109 | + | OsNaBo_02g0032750.02 | OsNaBo_02g0032750.02,OsNaBo_02g0032750.01 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0738300 | RBH | 0.000000 | 0.000000 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g29700 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0738300 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0011740 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0011960 | SBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0032960 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0032550 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0032680 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0258100 | SBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0032460 | RBH | 0.072476 | 0.000000 | 0.167191 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0534800 | RBH | 0.196045 | 1.8232305 | 0.047529 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011500 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0032520 | RBH | 0.000000 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0032700 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032330 | RBH | 0.0 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033020 | RBH | 0.0 | 1.423455 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |