Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_02G0404700		OGI:02065690 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr02:24363204-24368796		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		ATTAGCTAATCCCTCTTCTCTCTCTCGATCGATCTCTCAGTCTCACCCATCCCTCCCTCCCTGGCTTTTTTACCCCTCACGGGCCGCACGCTGCCTCGCTCCCTCCGACCGACCGCCACACCACCACCCCCCACCCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCCACATCCCCATCGTCTCTCACCGCGTTGCTGCTGCTGCTGCCGCCTCGGCCACCGCGCGCCCGCCCGCGCGTCGCACGCAGCTTCTTCCTCTTCTTCTTCTTCCCCACCCTCTCCACCCGATGCGGCGGTCGGCGCCGCGCTGCTGCTGCTGATGCGGGCGGTGGTGAAGAGGCGACGAGGGGGAGAGCGCGGGCGCTGCTGCGGCTATTGGAGATCCGGGGCTTCGTGGTAAGCAAGCTCTGCTCCCCACCCCCGCCCGCTCCCTACTGATTCCCGCCTGATCCCGCCGGGATTCCGCTAGATTGCTCTGCCCCCCGCGCGCGCCAGCGGCGAGCTCGGCTTTGCTGTGCTGTGCTGCGGCCGCCGCCGCCGCTATTGGCTGCGCGACGCGTGGGGGAGAAATGGGCTTAGGCTTTTAAGCGTGCTGTTTAGGCTTTTGACTGCTCTGTGGCTGTGCTTATGGTAGAAGCCGCCGTTAAAAGGTGGCTCGATTTTTTGTTTTTTCTCCCTTTCTTTTTGTGTCAGGGATCGTGCGGGGCTAGGCTGGGCTCGAGCAAGGTCACGAGTGAGTTAGTACGGGGATGGTGATCTTGTCATGATACAATGCGGTGTGGCTGTTTCTTTTTTTTTTTTGGTGAGAGTTTGGTAGAGAGATGACAAATCGTGGCTTAGTTTTCAAATTCTTTGTGATTTTGTTTCCCAATGCGGCCCCCAAGTAGCTCACTATGTTTGCAAAGCACATGGAATACCATTTTATTGAACCATTTTGTTTTTTTGTTCGTGGGGCATTAGGTTGGAAGTTTAATGCTGGATATTTATGCACATTTTGTTGCTCTGATCAAAGGTTTTAGTTGGCTCTGTTGTAAGCTTAAGAGGGAATTAGTGATTTAGTGTGGCTCATGTACCTTGAGTAGAAATGGTCGAATGCCATGGATCATTGTAGTATATATATACATCTACGCCACTGTGCTATACGCTTGTATTTTTGTACAAATTAACTTCTAATTCTTTAGGAATGTGAATTTGTCCAATTCGAGGGTTTCTTCTTGTTTATTATAACCGTGCATTTGTAAGTGACCAACGTGTCTTCGTGATGTACCAGTCCAACTTTCAAATACTTCCAAAAAGTTTAATTGGTGAATACATGTGGGTTCCTCATAGTTTTTACCTATGTCAAGTATCATGCTCAGCACTTGTTCATGGTTTATTTCTACCCCAGTTTTACGTTATAGTTTATATAGAAATGTCACACTGTCACTTTCTGGAACATTCAATCAGTATTCATGATATATACAACATACTTTACAATACTTTCTGGAAGTAGAATTTGCTTGAACACGTTAGATCCTTCTAGTTTCCTCCTACGTCCAATGAAGTGAGGTACTTTACTTGTGTTTATGATATACTTTTCTATCGACTTGCAAAAACTTTCTAAAAGTTGAGTTTCTTAATAACCTTAATGTCTTTTGATGCGCTGTACGCGTGCCATATGCTATGCTTTTACACCAACTTCCAAGTTTTCCCTAAAAGCTGTTCTTCTATTTAAGCGATTAGTGGGGTCGTGTGACCCCACGGGACCCAAAGTGGATCCATTTCGACGGGGATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTAAGTCTCATATTTTTGCACTGTCATCTATAATTTGATGATCTGTGTGAAAGTTTTGCTTCTAAATTAATTTTTGATTGATGCTGGGATTGGCAGGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGGTCTTGATCTTTTTGTTGACTCTTATCATTTCTTTTCTTGGAGTGGCAGTTGTGGATGCTTTTGAATGTTGAAAATGTACTCGCTTGTTGTTCAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGGTAAGATTGCTATTTGGAAACCTGGTTGCTTCATGGGCATTTACATGGTGGATTTCTGCAATCCGGAATAATAACTATTCATTAGTTCATATACACCATGAGGTCAGACAGTTGCAGGACTTCTTTTTGTGTGTGTGTCCTTGGGTGTTGGGGGCATGGTCCATTCCTGTGCATAATCAATTTCTTCAGTGGGTACTCATATGTCATCTTGTATCAACTTCTAATAATAATTTGAATTTCACACAGCTGTTTGCCAAAAAACTAATGTTTTTTTTATTTTAATATTACATTAAACATTCTTTGTGGATTTACCCCACCAGCCAAAGTCACTTGAAGATTCAAGACAAATAAAATGTTCTCATTAGTAACATAGGATGAGAATTGAGAATATAATCTACTCTGGCTGTCTGACCTATTATGTAAAGTTAAGCTTCATATTGCACAAGCAATGTGCATTTTTCAAGGGCAGGAATGAGCTCTTCTTTTTACATTCAATCTTATTAAGTTATGGTGAATTGGTGATGTTTGGAAGTTAAGTCAAAAGGTAGCAGTGTCAATGGCTTGTTCCTCTTTTCCTGTGTCCTGTTGTGTCTGCATGTGATGCTATTATGGGCTAGTCTATTTATGGGAACTAAGCCTAAATACCACAAATAGCACTAATTGTGGGTGTAATGGAAGACGAGTGCAGGGGAGCAGGCAATCTATATTGTTTGTGTATGTTTGTCCAATGAGGTAATAACCTCAATCAGCAAATATAGTGGGGGAAGGAACTGATTCAATCTGTCATACCATTTTTCTCTTCATTCTTTATTATTGCATGGACTGGTCTGCAATGATGGAGATCTGTCTAGATATTCATGGCGTTGATTGGGAAATTTACTAATTATAGAAAAATGTTTCAAGATAATAATGATTATACAGCTTTCTGAGGATTTCTTGGTTGACCTTCGATGGAAGAAACCAAATTTAAGTCCATCTTGTACTATGTTTTCAATGAATAATAATGTGGACGAATTAGTAATGTGGAAGATTCCAAGTACGACCGGCATATGATCCATTAGAGGGGCCCCTGGGGGGCGGGCATCTTAAAAAGGTAGCTTCAGTTCTGACCTTCTGATAGCCACCTTCCAAGGGCGGTTCCTTTTGGAAAGAGGTGGTTCTCCCAAATGGTTTATTATTGTTTTTCGGTTTAAGATATAATAGAATCTCTAAGCATGCTAAGTTTATACTGTATAGTGTATCAAGTAGCAAAACATTCAGGACGGGTGTACCTAGTGCAAAAGTGAACCAGCAACTAGAAAAGGACTGCTATTATTTCCTCTTTCGATAAAATGCCAGGAAATATTAATGAGCTGAACATCGGATGCCAGTGGAGTACTACTGATTCTAGTTCACGAATCAATGCATAGCTCTGTTATTCAAAAAACAGTACTATATTTCTCTACTGTAAATTTACCTAATACTATTTGGTGTTTTTTTTCAGTATTTTCTTTTCAGAGCTATTTTTTTGAAAAAAAATCAAGCCAGAAATATTTGTACAAATAAGGTTTATCATGAGCCATTGTTTTGTCCTTCTGTACGTACAGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGGTTTCTGTTACTGCAGTTCATATTTGTCAATATAATTCTTTTTTGTCAATATTTGCTAATCCTGAAATATATCCACAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGGTATAATTACTGATACTTCAGTCTAATGTGTGGAAGAGTGGTTTGTCAATGCTATTTGCTTGAATACCATATTTTCTCAACATTTGCATCGTTAGGTTTAGATGTACATATGAAGCTGCCAGTGTGGCGTTTGTAAGGCTATTATTCAAGTTTGACTTCACCACTCAGTCTTTCCCCTGGGTGGGTTTTGCTGTAGGCTCTTGATTAATTTTCATAGAGCTCTGGTTTTTTTACCATATGTATTTTTTCCTGTCCATATTCTGGTATAGTATATCTGGTATTTGACATGATGCAAGCCTCATTTTCTGCAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAGCACAGAACAAAGGAAACTCCCCTGGAGGATGCAAATATGAAGAGAACATTACCTCCTGATGCACAGCGGCTCGGATCACGGCCCGGCGGCGAGTCCCGGTGCCCATAGCCCATACCCAAAGAATGGCAGAAGTTCTTGTAGAACTGTTGTTTCTGCTAGTCAGTCCACCCCTCTCTTCTTCTGACATGTTTAACATACCGGCAGGATAAATCGAGTAAGCTTTTGACTCCTGCTATCAGTGATGAAAATAGTTCTGTCGTATATTTTCGGTGGACAAGTTATTCAATGTCTAAACTGCGCCCGCTCATCGTATAGTAATAATCCGCATTCATCAGTTTTCTCCTGTGCTGGAAATCAAGGGGGTGCTATACTTCTATAGGCTCTGTTCCTTCTCTGTATCTTTCCCTTGTTCTCTTGCTTGCAATGTTGATAGTTTGGTGCTGAGTCTGTATCGGGGGCAAAGTTCAGGCCGAGGATGCTCGGCAGGAATAACAGTCCATGGTCATCAGAACCATAATCCCCTCTAATATAACTGCACAAGTAAGTTTTAGACTTACTCCACATGCATAGAACAGTTCAAGACTAACTTTTGATACCC More
CDS seq		ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG More
Protein seq		MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQAAYAAAFKNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY
Function		Serine/threonine-protein kinase STY13 [UniProtKB/Swiss-Prot:Q9ZQ31]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0404700	OsZS97_02T0404700.1	Chr02	24363204	24368564	+	makerRMon
CDS seq	ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG More
Protein seq	MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQAAYAAAFKNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0404700	OsZS97_02T0404700.2	Chr02	24363204	24368549	+	makerRMon
CDS seq	ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG More
Protein seq	MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQAAYAAAFKNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0404700	OsZS97_02T0404700.3	Chr02	24363204	24368564	+	makerRMon
CDS seq	ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG More
Protein seq	MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQAAYAAAFKNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0404700	OsZS97_02T0404700.4	Chr02	24363204	24368796	+	makerRMon
CDS seq	ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGGTAAGATTGCTATTTGGAAACCTGGTTGCTTCATGGGCATTTACATGGTGGATTTCTGCAATCCGGAATAA More
Protein seq	MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPGKIAIWKPGCFMGIYMVDFCNPE

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0404700	OsZS97_02T0404700.5	Chr02	24363204	24367880	+	makerRMon
CDS seq	ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGGTTTAG More
Protein seq	MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQAAYAAAFKV More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	10.2610025	20.291044	26.3853885

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0594100	RBH	2.646426	2.442009	2.268962
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g38080	RBH	1.697671	1.636277	0.581878
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0594100	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0023290	RBH	0.594006	14.248353	5.721675
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0023390	RBH	0.299293	5.658025	2.653483
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0023360	RBH	0.656861	12.547927	6.718922
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0023090	RBH	0.373770	0.654693	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0022970	RBH	4.399258	12.191190	11.596973
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0376900	RBH	8.2848755	20.7112605	27.204055
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0022750	RBH	0.245894	1.312073	1.400327
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0368900	RBH	2.3085665	0.8581065	4.6280865
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0023140	RBH	0.094940	0.208394	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0022970	RBH	0.238890	18.457382	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0023330	RBH	0.0	13.434564	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0023030	RBH	0.327053	1.042056	1.069726
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0022840	RBH	0.507189	10.888863	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G023280	RBH	0.534309	8.046087	4.846710
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0023140	RBH	0.850477	5.659944	7.107893

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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