Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_02g0023290 OGI:02065690 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr02:23341451-23346686
Gene Symbol -
DNA seq

GCTCCCTCCGACCGACCGCCACACCACCACCCCCCACCCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACATCCCCATCGTCTCTCACCGCGTTGCTGCTGCTGCTGCCGCCTCGGCCACCGCGCGCCCGCCCGCGCGTCGCACGCAGCTTCTTCCTCTTCTTCTTCTTCCCCACCCTCTCCACCCGATGCGGCGGTCGGCGCCGCGCTGCTGCTGCTGATGCGGGCGGTGGTGAAGAGGCGACGAGGGGGAGAGCGCGGGCGCTGCTGCGGCTATTGGAGATCCGGGGCTTCGTGGTAAGCAAGCTCTGCTCCCCACCCCCGCCCGCTCCCTACTGATTCCCGCCTGATCCCGCCGGGATTCCGCTAGATTGCTCTGCCCCCCGCGCGCGCCAGCGGCGAGCTCGGCTTTGCTGTGCTGTGCTGCGGCCGCCGCCGCCGCTATTGGCTGCGCGACGCGTGGGGGAGAAATGGGCTTAGGCTTTTAAGCGTGCTGTTTAGGCTTTTGACTGCTCTGTGGCTGTGCTTATGGTAGAAGCCGCCGTTAAAAGGTGGCTCGATTTTTTGTTTTTTCTCCCTTTCTTTTTGTGTCAGGGATCGTGCGGGGCTAGGCTGGGCTCGAGCAAGGTCACGAGTGAGTTAGTACGGGGATGGTGATCTTGTCATGATACAATGCGGTGTGGCTGTTTCTTTTTTTTTTTTTTGGTGAGAGTTTGGTAGAGAGATGACAAATCGTGGCTTAGTTTTCAAATTCTTTGTGATTTTGTTTCCCAATGCGGCCCCCAAGTAGCTCACTATGTTTGCAAAGCACATGGAATACCATTTTATTGAACCATTTTGTTTTTTTGTTCGTGGGGCATTAGGTTGGAAGTTTAATGCTGGATATTTATGCACATTTTGTTGCTCTGATCAAAGGTTTTAGTTGGCTCTGTTGTAAGCTTAAGAGGGAATTAGTGATTTAGTGTGGCTCATGTACCTTGAGTAGAAATGGTCGAATGCCATGGATCATTGTAGTATATATATACATCTACGCCACTGTGCTATACGCTTGTATTTTTGTACAAATTAACTTCTAATTCTTTAGGAATGTGAATTTGTCCAATTCGAGGGTTTCTTCTTGTTTATTATAACCGTGCATTTGTAAGTGACCAACGTGTCTTCGTGATGTACCAGTCCAACTTTCAAATACTTCCAAAAAGTTTAATTGGTGAATACATGTGGGTTCCTCATAGTTTTTACCTATGTCAAGTATCATGCTCAGCACTTGTTCATGGTTTATTTCTACCCCAGTTTTACGTTATAGTTTATATAGAAATGTCACACTGTCACTTTCTGGAACATTCAATCAGTATTCATGATATATACAACATACTTTACAATACTTTCTGGAAGTAGAATTTGCTTGAACACGTTAGATCCTTCTAGTTTCCTCCTACGTCCAATGAAGTGAGGTACTTTACTTGTGTTTATGATATACTTTTCTATCGACTTGCAAAAACTTTCTAAAAGTTGAGTTTCTTAATAACCTTAATGTCTTTTGATGCGCTGTACGCGTGCCATATGCTATGCTTTTACACCAACTTCCAAGTTTTCCCTAAAAGCTGTTCTTCTATTTAAGCGATTAGTGGGGTCGTGTGACCCCACGGGACCCAAAGTGGATCCATTTCGACGGGGATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTAAGTCTCATATTTTTGCACTGTCATCTATAATTTGATGATCTGTGTGAAAGTTTTGCTTCTAAATTAATTTTTGATTGATGCTGGGATTGGCAGGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGGTCTTGATCTTTTTGTTGACTCTTATCATTTCTTTTCTTGGAGTGGCAGTTGTGGATGCTTTTGAATGTTGAAAATGTACTCGCTTGTTGTTCAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGGTAAGATTGCTATTTGGAAACCTGGTTGCTTCATGGGCATTTACATGGTGGATTTCTGCAATCCGGAATAATAACTATTCATTAGTTCATATACACCATGAGGTCAGACAGTTGCAGGACTTCTTTTTGTGTGTGTGTCCTTGGGTGTTGGGGGCATGGTCCATTCCTGTGCATAATCAATTTCTTCAGTGGGTACTCATATGTCATCTTGTATCAACTTCTAATAATAATTTGAATTTCACACAGCTGTTTGCCAAAAAACTAATGTTTTTTTTATTTTAATATTACATTAAACATTCTTTGTGGATTTACCCCACCAGCCAAAGTCACTTGAAGATTCAAGACAAATAAAATGTTCTCATTAGTAACATAGGATGAGAATTGAGAATATAATCTACTCTGGCTGTCTGACCTATTATGTAAAGTTAAGCTTCATATTGCACAAGCAATGTGCATTTTTCAAGGGCAGGAATGAGCTCTTCTTTTTACATTCAATCTTATTAAGTTATGGTGAATTGGTGATGTTTGGAAGTTAAGTCAAAAGGTAGCAGTGTCAATGGCTTGTTCCTCTTTTCCTGTGTCCTGTTGTGTCTGCATGTGATGCTATTATGGGCTAGTCTATTTATGGGAACTAAGCCTAAATACCACAAATAGCACTAATTGTGGGTGTAATGGAAGACGAGTGCAGGGGAGCAGGCAATCTATATTGTTTGTGTATGTTTGTCCAATGAGGTAATAACCTCAATCAGCAAATATAGTGGGGGAAGGAACTGATTCAATCTGTCATACCATTTTTCTCTTCATTCTTTATTATTGCATGGACTGGTCTGCAATGATGGAGATCTGTCTAGATATTCATGGCGTTGATTGGGAAATTTACTAATTATAGAAAAATGTTTCAAGATAATAATGATTATACAGCTTTCTGAGGATTTCTTGGTTGACCTTCGATGGAAGAAACCAAATTTAAGTCCATCTTGTACTATGTTTTCAATGAATAATAATGTGGACGAATTAGTAATGTGGAAGATTCCAAGTACGACCGGCATATGATCCATTAGAGGGGCCCCTGGGGGGCGGGCATCTTAAAAAGGTAGCTTCAGTTCTGACCTTCTGATAGCCACCTTCCAAGGGCGGTTCCTTTTGGAAAGAGGTGGTTCTCCCAAATGGTTTATTATTGTTTTTCGGTTTAAGATATAATAGAATCTCTAAGCATGCTAAGTTTATACTGTATAGTGTATCAAGTAGCAAAACATTCAGGACGGGTGTACCTAGTGCAAAAGTGAACCAGCAACTAGAAAAGGACTGCTATTATTTCCTCTTTCGATAAAATGCCAGGAAATATTAATGAGCTGAACATCGGATGCCAGTGGAGTACTACTGATTCTAGTTCACGAATCAATGCATAGCTCTGTTATTCAAAAAACAGTACTATATTTCTCTACTGTAAATTTACCTAATACTATTTGGTGTTTTTTTTCAGTATTTTCTTTTCAGAGCTATTTTTTTGAAAAAAAATCAAGCCAGAAATATTTGTACAAATAAGGTTTATCATGAGCCATTGTTTTGTCCTTCTGTACGTACAGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGGTTTCTGTTACTGCAGTTCATATTTGTCAATATAATTCTTTTTTGTCAATATTTGCTAATCCTGAAATATATCCACAGTTGTACAGCACAGTGACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCTTATGCTGCTGCTTTCAAGGTATAATTACTGATACTTCAGTCTAATGTGTGGAAGAGTGGTTTGTCAATGCTATTTGCTTGAATACCATATTTTCTCAACATTTGCATCGTTAGGTTTAGATGTACATATGAAGCTGCCAGTGTGGCGTTTGTAAGGCTATTATTCAAGTTTGACTTCACCACTCAGTCTTTCCCCTGGGTGGGTTTTGCTGTAGGCTCTTGATTAATTTTCATAGAGCTCTGGTTTTTTTACCATATGTATTTTTTCCTGTCCATATTCTGGTATAGTATATCTGGTATTTGACATGATGCAAGCCTCATTTTCTGCAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAGCACAGAACAAAGGAAACTCCCCTGGAGGATGCAAATATGAAGAGAACATTACCTCCTGATGCACAGCGGCTCGGATCACGGCCCGGCGGCGAGTCCCGGTGCCCATAGCCCATACCCAAAGAATGGCAGAAGTTCTTGTAGAACTGTTGTTTCTGCTAGTCAGTCCACCCCTCTCTTCTTCTGACATGTTTAACATACCGGCAGGATAAATCGAGTAAGCTTTTGACTCCTGCTATCAGTGATGAAAATAGTTCTGTCGTATATTTTCGGTGGACAAGTTATTCAATGTCTAAACTGCGCCCGCTCATCGTATAGTAATAATCCGCATTCATCA

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CDS seq

ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGGTAAGATTGCTATTTGGAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGCCTCATTTTCTGCAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG

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Protein seq

MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPGKIAIWKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPEPHFLQNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY

Function Serine/threonine-protein kinase STY13 [UniProtKB/Swiss-Prot:Q9ZQ31]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_02g0023290 OsAzu_02g0023290.02 Chr02 23341451 23346352 + NAM
CDS seq

ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGCCTCATTTTCTGCAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG

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Protein seq

MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPEPHFLQNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY

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Gene Transcript Chromosome Start End Strand Source
OsAzu_02g0023290 OsAzu_02g0023290.01 Chr02 23341451 23346352 + NAM
CDS seq

ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGGTAAGATTGCTATTTGGAAACCTGAGAACTTGCTGTTGACCGCAGACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGCCTCATTTTCTGCAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG

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Protein seq

MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDTPEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPGKIAIWKPENLLLTADQRTVKLVDLGLAREETLTEMMTAETGTYRWMAPEPHFLQNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY

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Gene Transcript Chromosome Start End Strand Source
OsAzu_02g0023290 OsAzu_02g0023290.03 Chr02 23341456 23346686 + IsoSeq
CDS seq

TCCGACCGACCGCCACACCACCACCCCCCACCCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACATCCCCATCGTCTCTCACCGCGTTGCTGCTGCTGCTGCCGCCTCGGCCACCGCGCGCCCGCCCGCGCGTCGCACGCAGCTTCTTCCTCTTCTTCTTCTTCCCCACCCTCTCCACCCGATGCGGCGGTCGGCGCCGCGCTGCTGCTGCTGATGCGGGCGGTGGTGAAGAGGCGACGAGGGGGAGAGCGCGGGCGCTGCTGCGGCTATTGGAGATCCGGGGCTTCGTGTGGGGTCGTGTGACCCCACGGGACCCAAAGTGGATCCATTTCGACGGGGATGGAATCTGG

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Protein seq

SDRPPHHHPPPLFSLSLSLSLSTSPSSLTALLLLLPPRPPRARPRVARSFFLFFFFPTLSTRCGGRRRAAAADAGGGEEATRGRARALLRLLEIRGFVWGRVTPRDPKWIHFDGDGIW

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr02 23341750 23343079 + OsAzu_02g0023290.01,OsAzu_02g0023290.02 OsAzu_02g0023290.03,OsAzu_02g0023290.02,OsAzu_02g0023290.01 All
A5 Chr02 23343778 23345365 + OsAzu_02g0023290.01 OsAzu_02g0023290.03,OsAzu_02g0023290.02,OsAzu_02g0023290.01 All

Expression

Leaf Root Panicle
FPKM 0.594006 14.248353 5.721675

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0594100 RBH 2.646426 2.442009 2.268962
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g38080 RBH 1.697671 1.636277 0.581878
Nipponbare | IRGSP 1.0 | RAP-db Os02g0594100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0016900 RBH 0.217007 0.0 0.527188
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0023390 RBH 0.299293 5.658025 2.653483
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0023360 RBH 0.656861 12.547927 6.718922
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0023090 RBH 0.373770 0.654693 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0022970 RBH 4.399258 12.191190 11.596973
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0376900 RBH 8.2848755 20.7112605 27.204055
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0022750 RBH 0.245894 1.312073 1.400327
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0404700 RBH 10.2610025 20.291044 26.3853885
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0023140 RBH 0.094940 0.208394 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0022970 RBH 0.238890 18.457382 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0023330 RBH 0.0 13.434564 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0023030 RBH 0.327053 1.042056 1.069726
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0022840 RBH 0.507189 10.888863 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G023280 RBH 0.534309 8.046087 4.846710
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0023140 RBH 0.850477 5.659944 7.107893
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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