Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_01G0409600		OGI:01013090 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr01:26588333-26592468		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		CYP72A32, OsCYP72A32, CYP72A17, OsCYP72A17
DNA seq		CCGGGATTTGCAACCATACATCTTCTCCTCCATTCAAAGCGCCAGCCGTGTACCACCGCCCGAAGCACGTAGAACCACGCCAAGATGCGTGAACCCCCGCTTGCGTCGCGTCGACATGCGCAGCGGCGCCCATGCTCCCCATGTCGTTGTCCCGCTCCTTGAAGAGATACACCTATGTTAGCCACGTCTTTTCTGTTTGAGATCCTTCCAAATCCTCCCCCCGTCTTAATTTCTTCCCATCTCTCCGGCGGCGCCGGCGCCATTCGCCTTTTCTCCCAAACGCTCACCGGCTGGCAGCCCCCAGCCTCCCCGCCTGCTCGTTCGGCCGGTCTCGGCCTCCCCCTGCGTTGATCTCCAACCTGAGCACCGTCGACCACGCCGACGCCGGCGACGCCTCGCCCGCGTACAAGGTACCAGGTACTGCATCTGCATGCATACTGCACACACGTGTCTTGCTGAATTCCTCCACCGTGGCAATGCGGCGGAGGTCGCGCTGTGACCTCACCTCACCTCCGGCTACGTGGCGCCGTCACGTGGAGTGATTCACTACCGTAATCAGTGACGTCAGTAGTATCAGATAGGGTTTCGGAGTTATTCTGTGGGACAGGATGGTCACTAATTTCCGGTTTTGGTTTTAGGATATCATTTTCTTTTTAGTGTTGGAGAACAGGAGAAGGCAATCATTGATTGTTACTTTGTTAGTAATTGGTTAGTATATCTGCACTGCACTCTGCACACACGTACTGATCTCTCCGTCCCGTTTGCTTCAACAACACATTTGCTTTGCTCGGTACATGCAGAGAGAAAAAGAAGCAATGGGCATCGGCATCGGCATCGGCATCGGCACCGGCACCGGCGCGGCGCTACCATTCGGCGAGGCCTCGCCGTGGAGCCTGCTCGGCGGCGCGGTGGCCGCGCTGCTGCTGGTCTGGGCCGCGCAGATGCTGGAGTGGGCCTGGCTGGCCCCGCGGCGGATGGAACGGGCCCTCAGGGCCCAGGGCCTGAGGGGCACCCAGTACCGCTTCCTCCATGGCGACCTCACCGAGGACCTGCGGCTCGTCACGGCGGCCCGCTCCAAGCCCGTGCCCATGGACCGGCCCCACGACTTCATCCCGCGCGTCGCGCCTCTGCTTCACCGTGCCTTGGAGGAACACGGTACTGTACTCGCTCTACTTCTGCAATATTTGTTTTCTTTTGTTTTGTTTTTCGGCGAACACATCCAAGATTTGATTGTTGTTATGCAACTTTAAGTTCATCGTACAGTTGATCTAGAAATGCCACTATTTGATCATCAATTATCTTGTTTTTTTCAGTGTCTTTGTACCATGTTCTGATCTCTGTGCGCATGAAAATGCAGGTAGGGTTTCTTTTACATGGTTCGGGCCAATGCCAAGGGTTACAATCACTGATCCGGACTTGGTCCGTGAAGTTCTATCGAACAAATTTGGTCACTTTGAGAAGACAAAGCTGGCCACTCGGCTTTCTAAGTTACTCGTTGGTGGGCTTGTGATCCTTCATGGTGAAAAATGGGTCAAACATAGGAGGATTATGAATCCAGCCTTTCATGCAGAAAAGCTAAAGGTATTATTACTAGGATTTACTGAAAGAATTCGTGAATATGAGACCTGACTACTGTATTTAGTATTCAGGATTTCATGTGTAAGAATTATCATTTAGTAAGACGATCGCTTAGCCTAGCTATTTGATCAGAAGTTAAATTAATCTGATGAATGCCTGCATTCTTTGCAGTCACTAAACAGGTCGAACTAAACATATTAGAACTGGAGATCAATTTGGTTACACTTACTTTCCTGGTATTTTTCCCCTTTCCCTGACTTATATATTCCCTTGGAACTAATTGCAGCGGATGTTGCCAGCATTCTCCGCATCTTGTAGCGAACTAATTGGCAGATGGGAGAATGCGGTTGCTGCTTCTGTTGGAAAAGCCGAGCTGGACATTTGGCCAGATTTTCAGAATTTATCAGGAGATGTTATTTCAAGAGCAGCATTTGGTGTCAGACACCACGAAGGCAGACAAATTTTCCTACTTCAGGCCGAGCAAGCTGAACGCCTTGTTCAATCTTTCCGGAGTAATTACATCCCAGGCTTATCGTATGATTCTCATCACTGTCCCAACATCTTTAGTTTCAGTCCCCGTTTTCTTTTTTCAACTCATCTGTTGGATTATACTTCCTCCGTTTCATATTACTACATAAGACTTTCTAGCATTGCCCATATTCATATAGATGTTAATGCTAGAAAGCCTTATAAGCTGAAACGGAAGTAGTAATTTATAACTGGATTATTTGTTTCACACTTCTAAAAATGCTCTTAATAAACTTTCTTTTACTGCATTGTTGACACCAATTATTCTAAGTTATTTGTTAGTTTTATAATATATAATATGTAGTTTATCTTTACAAACGAGTGGATCATCCATCAACTTTTACCTGCATAGTATATATTTAAAACGCTACCTAAAGTTCAGAGTGCTCCTAATCTTTCTTTGTTTTGTTTTTGTTTTGCCGAATTTATCAATATCAAGAGAAAATTAAGTACATACAGGACAACATAATAGTTGTGAGAAAAACATGGATGGACCACCAAAGACCAAAAAGTGCTCCTTACATTTGCCATTATTTGTGTCTTACATTTGCCATTATTTGTGTCCAACTTTCATTGTTTCGGGAATATATCCAACTTTTATGTAGAGAAAAAAACTAAATTCATTTTGTATCCACTTATTCGTTTCATCCATAGATGATAGAACTAACATAATACTCTCCCTCCAGTCTTTTACCGACAGAAAACAACAGAAGGATGAAGGCAATAGACAGAGAGATCAAGAGTATTCTAAGAGGCATAATAGAAAAGAGGCAGAAGGCCACGAAGAACGGCGAAGCCAGCAAGGACGATCTGCTCGGCTTGCTCCTACAATCCAACATGGATTATTACAGCGACGAGGACGGCAAATCCAGCAAGGGGATGACCGTCGAGGAGATCATCGACGAATGCAAGCTGTTCTACTTCGCCGGGATGGAGACAACCGCCGTGTTGCTCACCTGGACAATGGTTTCCCTGAGCATGCACCCGGAGTGGCAGGATCGCGCCAGGGAGGAGATTCTGCAGGTCTTTGGGCGAAACAAACCTGATATCAATGGCGTTAGCCGCCTGAAAGTCGTGAGTGGTGCACTCTGCCCCGTAACGCAATTTTTGCACCGTTTTCTGCAAAAGATGTTCACGATTTGATGATCGATGGAGCCGATCTTTGGCAGGTGACCATGGTGCTGCACGAGGTGCTGCGCCTGTACCCGCCGGTGGTGATGATGAACCGCCGCACGTACAAGGAGATCGAGCTCGGCGGCGTCAGGTACCCGGCGGGCGTGATGCTGTCGCTGCCCGTGCTGTTCATCCACCGCGACGCCGCCGCGTGGGGGCACGACGCCGGCGAGTTCGACCCGGGGAGGTTCGCGGAGGGCGTGGCCAGGGCGTGCAAGGACCCCGGCGCCGGCGCGTTCTTCCCGTTCAGCTGGGGCCCGCGCATCTGCATCGGCCAGAACTTCGCACTGCTGGAGGCCAAGGTGGCGCTCGGCATGATCCTGCAGCGCTTCGCGTTCGAGCTGTCGCCGGCGTACGCGCACGCGCCCTACACCGTGCTGACGCTGCACCCGCAGCACGGCGTTCCGGTTAGGCTGCGCCGACTCTGATCGTCGGGTTAGGGAAAGAAAAAAAGATGAAATGAAATGAAATCGTCTGTATAGATCCGTGCATCCGGCATTCTGAATCTCTGATATCAAAGCAGAACACATTTGCTGATAAACACTGGAAGCTCCATGTTCCGGGCATCCGGCACTCTGAAATCTCAATCTCTGATATGAAAGCAGAACACTATTTGCTGACAACCGCTGCTGCAGTTCCTTGCATAGTTGAAGTGTATGAGTATCCGTACTCCATATCACGGGTATTCAGCTGGTCTTCTTAAATCCTAAACTGTTAAGGTGTGTTCTTTCCCCGAGAATAAAATAGAATAAGAATATACATGTTCTCTATTGGTGTGATTTTTTTTTAAAGTTACATATAAGTTATTTAAAATATTACATTTAAACCATTCTTTTACTTAATACATTTGTTTGTAC More
CDS seq		ATGCAGAGAGAAAAAGAAGCAATGGGCATCGGCATCGGCATCGGCATCGGCACCGGCACCGGCGCGGCGCTACCATTCGGCGAGGCCTCGCCGTGGAGCCTGCTCGGCGGCGCGGTGGCCGCGCTGCTGCTGGTCTGGGCCGCGCAGATGCTGGAGTGGGCCTGGCTGGCCCCGCGGCGGATGGAACGGGCCCTCAGGGCCCAGGGCCTGAGGGGCACCCAGTACCGCTTCCTCCATGGCGACCTCACCGAGGACCTGCGGCTCGTCACGGCGGCCCGCTCCAAGCCCGTGCCCATGGACCGGCCCCACGACTTCATCCCGCGCGTCGCGCCTCTGCTTCACCGTGCCTTGGAGGAACACGGTAGGGTTTCTTTTACATGGTTCGGGCCAATGCCAAGGGTTACAATCACTGATCCGGACTTGGTCCGTGAAGTTCTATCGAACAAATTTGGTCACTTTGAGAAGACAAAGCTGGCCACTCGGCTTTCTAAGTTACTCGTTGGTGGGCTTGTGATCCTTCATGGTGAAAAATGGGTCAAACATAGGAGGATTATGAATCCAGCCTTTCATGCAGAAAAGCTAAAGCGGATGTTGCCAGCATTCTCCGCATCTTGTAGCGAACTAATTGGCAGATGGGAGAATGCGGTTGCTGCTTCTGTTGGAAAAGCCGAGCTGGACATTTGGCCAGATTTTCAGAATTTATCAGGAGATGTTATTTCAAGAGCAGCATTTGGTGTCAGACACCACGAAGGCAGACAAATTTTCCTACTTCAGGCCGAGCAAGCTGAACGCCTTGTTCAATCTTTCCGGAGTAATTACATCCCAGGCTTATCTCTTTTACCGACAGAAAACAACAGAAGGATGAAGGCAATAGACAGAGAGATCAAGAGTATTCTAAGAGGCATAATAGAAAAGAGGCAGAAGGCCACGAAGAACGGCGAAGCCAGCAAGGACGATCTGCTCGGCTTGCTCCTACAATCCAACATGGATTATTACAGCGACGAGGACGGCAAATCCAGCAAGGGGATGACCGTCGAGGAGATCATCGACGAATGCAAGCTGTTCTACTTCGCCGGGATGGAGACAACCGCCGTGTTGCTCACCTGGACAATGGTTTCCCTGAGCATGCACCCGGAGTGGCAGGATCGCGCCAGGGAGGAGATTCTGCAGGTCTTTGGGCGAAACAAACCTGATATCAATGGCGTTAGCCGCCTGAAAGTCGTGACCATGGTGCTGCACGAGGTGCTGCGCCTGTACCCGCCGGTGGTGATGATGAACCGCCGCACGTACAAGGAGATCGAGCTCGGCGGCGTCAGGTACCCGGCGGGCGTGATGCTGTCGCTGCCCGTGCTGTTCATCCACCGCGACGCCGCCGCGTGGGGGCACGACGCCGGCGAGTTCGACCCGGGGAGGTTCGCGGAGGGCGTGGCCAGGGCGTGCAAGGACCCCGGCGCCGGCGCGTTCTTCCCGTTCAGCTGGGGCCCGCGCATCTGCATCGGCCAGAACTTCGCACTGCTGGAGGCCAAGGTGGCGCTCGGCATGATCCTGCAGCGCTTCGCGTTCGAGCTGTCGCCGGCGTACGCGCACGCGCCCTACACCGTGCTGACGCTGCACCCGCAGCACGGCGTTCCGGTTAGGCTGCGCCGACTCTGA More
Protein seq		MQREKEAMGIGIGIGIGTGTGAALPFGEASPWSLLGGAVAALLLVWAAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLVTAARSKPVPMDRPHDFIPRVAPLLHRALEEHGRVSFTWFGPMPRVTITDPDLVREVLSNKFGHFEKTKLATRLSKLLVGGLVILHGEKWVKHRRIMNPAFHAEKLKRMLPAFSASCSELIGRWENAVAASVGKAELDIWPDFQNLSGDVISRAAFGVRHHEGRQIFLLQAEQAERLVQSFRSNYIPGLSLLPTENNRRMKAIDREIKSILRGIIEKRQKATKNGEASKDDLLGLLLQSNMDYYSDEDGKSSKGMTVEEIIDECKLFYFAGMETTAVLLTWTMVSLSMHPEWQDRAREEILQVFGRNKPDINGVSRLKVVTMVLHEVLRLYPPVVMMNRRTYKEIELGGVRYPAGVMLSLPVLFIHRDAAAWGHDAGEFDPGRFAEGVARACKDPGAGAFFPFSWGPRICIGQNFALLEAKVALGMILQRFAFELSPAYAHAPYTVLTLHPQHGVPVRLRRL
Function		Cytochrome P450 72A13 [UniProtKB/Swiss-Prot:Q9LUC8]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_01G0409600	OsZS97_01T0409600.1	Chr01	26588349	26592468	+	makerRMon
CDS seq	ATGGGCATCGGCATCGGCATCGGCATCGGCACCGGCACCGGCGCGGCGCTACCATTCGGCGAGGCCTCGCCGTGGAGCCTGCTCGGCGGCGCGGTGGCCGCGCTGCTGCTGGTCTGGGCCGCGCAGATGCTGGAGTGGGCCTGGCTGGCCCCGCGGCGGATGGAACGGGCCCTCAGGGCCCAGGGCCTGAGGGGCACCCAGTACCGCTTCCTCCATGGCGACCTCACCGAGGACCTGCGGCTCGTCACGGCGGCCCGCTCCAAGCCCGTGCCCATGGACCGGCCCCACGACTTCATCCCGCGCGTCGCGCCTCTGCTTCACCGTGCCTTGGAGGAACACGGTAGGGTTTCTTTTACATGGTTCGGGCCAATGCCAAGGGTTACAATCACTGATCCGGACTTGGTCCGTGAAGTTCTATCGAACAAATTTGGTCACTTTGAGAAGACAAAGCTGGCCACTCGGCTTTCTAAGTTACTCGTTGGTGGGCTTGTGATCCTTCATGGTGAAAAATGGGTCAAACATAGGAGGATTATGAATCCAGCCTTTCATGCAGAAAAGCTAAAGCGGATGTTGCCAGCATTCTCCGCATCTTGTAGCGAACTAATTGGCAGATGGGAGAATGCGGTTGCTGCTTCTGTTGGAAAAGCCGAGCTGGACATTTGGCCAGATTTTCAGAATTTATCAGGAGATGTTATTTCAAGAGCAGCATTTGGTGTCAGACACCACGAAGGCAGACAAATTTTCCTACTTCAGGCCGAGCAAGCTGAACGCCTTGTTCAATCTTTCCGGAGTAATTACATCCCAGGCTTATCTCTTTTACCGACAGAAAACAACAGAAGGATGAAGGCAATAGACAGAGAGATCAAGAGTATTCTAAGAGGCATAATAGAAAAGAGGCAGAAGGCCACGAAGAACGGCGAAGCCAGCAAGGACGATCTGCTCGGCTTGCTCCTACAATCCAACATGGATTATTACAGCGACGAGGACGGCAAATCCAGCAAGGGGATGACCGTCGAGGAGATCATCGACGAATGCAAGCTGTTCTACTTCGCCGGGATGGAGACAACCGCCGTGTTGCTCACCTGGACAATGGTTTCCCTGAGCATGCACCCGGAGTGGCAGGATCGCGCCAGGGAGGAGATTCTGCAGGTCTTTGGGCGAAACAAACCTGATATCAATGGCGTTAGCCGCCTGAAAGTCGTGACCATGGTGCTGCACGAGGTGCTGCGCCTGTACCCGCCGGTGGTGATGATGAACCGCCGCACGTACAAGGAGATCGAGCTCGGCGGCGTCAGGTACCCGGCGGGCGTGATGCTGTCGCTGCCCGTGCTGTTCATCCACCGCGACGCCGCCGCGTGGGGGCACGACGCCGGCGAGTTCGACCCGGGGAGGTTCGCGGAGGGCGTGGCCAGGGCGTGCAAGGACCCCGGCGCCGGCGCGTTCTTCCCGTTCAGCTGGGGCCCGCGCATCTGCATCGGCCAGAACTTCGCACTGCTGGAGGCCAAGGTGGCGCTCGGCATGATCCTGCAGCGCTTCGCGTTCGAGCTGTCGCCGGCGTACGCGCACGCGCCCTACACCGTGCTGACGCTGCACCCGCAGCACGGCGTTCCGGTTAGGCTGCGCCGACTCTGA More
Protein seq	MGIGIGIGIGTGTGAALPFGEASPWSLLGGAVAALLLVWAAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLVTAARSKPVPMDRPHDFIPRVAPLLHRALEEHGRVSFTWFGPMPRVTITDPDLVREVLSNKFGHFEKTKLATRLSKLLVGGLVILHGEKWVKHRRIMNPAFHAEKLKRMLPAFSASCSELIGRWENAVAASVGKAELDIWPDFQNLSGDVISRAAFGVRHHEGRQIFLLQAEQAERLVQSFRSNYIPGLSLLPTENNRRMKAIDREIKSILRGIIEKRQKATKNGEASKDDLLGLLLQSNMDYYSDEDGKSSKGMTVEEIIDECKLFYFAGMETTAVLLTWTMVSLSMHPEWQDRAREEILQVFGRNKPDINGVSRLKVVTMVLHEVLRLYPPVVMMNRRTYKEIELGGVRYPAGVMLSLPVLFIHRDAAAWGHDAGEFDPGRFAEGVARACKDPGAGAFFPFSWGPRICIGQNFALLEAKVALGMILQRFAFELSPAYAHAPYTVLTLHPQHGVPVRLRRL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_01G0409600	OsZS97_01T0409600.2	Chr01	26588333	26592468	+	makerRMon
CDS seq	ATGGGCATCGGCATCGGCATCGGCATCGGCACCGGCACCGGCGCGGCGCTACCATTCGGCGAGGCCTCGCCGTGGAGCCTGCTCGGCGGCGCGGTGGCCGCGCTGCTGCTGGTCTGGGCCGCGCAGATGCTGGAGTGGGCCTGGCTGGCCCCGCGGCGGATGGAACGGGCCCTCAGGGCCCAGGGCCTGAGGGGCACCCAGTACCGCTTCCTCCATGGCGACCTCACCGAGGACCTGCGGCTCGTCACGGCGGCCCGCTCCAAGCCCGTGCCCATGGACCGGCCCCACGACTTCATCCCGCGCGTCGCGCCTCTGCTTCACCGTGCCTTGGAGGAACACGGTAGGGTTTCTTTTACATGGTTCGGGCCAATGCCAAGGGTTACAATCACTGATCCGGACTTGGTCCGTGAAGTTCTATCGAACAAATTTGGTCACTTTGAGAAGACAAAGCTGGCCACTCGGCTTTCTAAGTTACTCGTTGGTGGGCTTGTGATCCTTCATGGTGAAAAATGGGTCAAACATAGGAGGATTATGAATCCAGCCTTTCATGCAGAAAAGCTAAAGCGGATGTTGCCAGCATTCTCCGCATCTTGTAGCGAACTAATTGGCAGATGGGAGAATGCGGTTGCTGCTTCTGTTGGAAAAGCCGAGCTGGACATTTGGCCAGATTTTCAGAATTTATCAGGAGATGTTATTTCAAGAGCAGCATTTGGTGTCAGACACCACGAAGGCAGACAAATTTTCCTACTTCAGGCCGAGCAAGCTGAACGCCTTGTTCAATCTTTCCGGAGTAATTACATCCCAGGCTTATCTCTTTTACCGACAGAAAACAACAGAAGGATGAAGGCAATAGACAGAGAGATCAAGAGTATTCTAAGAGGCATAATAGAAAAGAGGCAGAAGGCCACGAAGAACGGCGAAGCCAGCAAGGACGATCTGCTCGGCTTGCTCCTACAATCCAACATGGATTATTACAGCGACGAGGACGGCAAATCCAGCAAGGGGATGACCGTCGAGGAGATCATCGACGAATGCAAGCTGTTCTACTTCGCCGGGATGGAGACAACCGCCGTGTTGCTCACCTGGACAATGGTTTCCCTGAGCATGCACCCGGAGTGGCAGGATCGCGCCAGGGAGGAGATTCTGCAGGTCTTTGGGCGAAACAAACCTGATATCAATGGCGTTAGCCGCCTGAAAGTCGTGACCATGGTGCTGCACGAGGTGCTGCGCCTGTACCCGCCGGTGGTGATGATGAACCGCCGCACGTACAAGGAGATCGAGCTCGGCGGCGTCAGGTACCCGGCGGGCGTGATGCTGTCGCTGCCCGTGCTGTTCATCCACCGCGACGCCGCCGCGTGGGGGCACGACGCCGGCGAGTTCGACCCGGGGAGGTTCGCGGAGGGCGTGGCCAGGGCGTGCAAGGACCCCGGCGCCGGCGCGTTCTTCCCGTTCAGCTGGGGCCCGCGCATCTGCATCGGCCAGAACTTCGCACTGCTGGAGGCCAAGGTGGCGCTCGGCATGATCCTGCAGCGCTTCGCGTTCGAGCTGTCGCCGGCGTACGCGCACGCGCCCTACACCGTGCTGACGCTGCACCCGCAGCACGGCGTTCCGGTTAGGCTGCGCCGACTCTGA More
Protein seq	MGIGIGIGIGTGTGAALPFGEASPWSLLGGAVAALLLVWAAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLVTAARSKPVPMDRPHDFIPRVAPLLHRALEEHGRVSFTWFGPMPRVTITDPDLVREVLSNKFGHFEKTKLATRLSKLLVGGLVILHGEKWVKHRRIMNPAFHAEKLKRMLPAFSASCSELIGRWENAVAASVGKAELDIWPDFQNLSGDVISRAAFGVRHHEGRQIFLLQAEQAERLVQSFRSNYIPGLSLLPTENNRRMKAIDREIKSILRGIIEKRQKATKNGEASKDDLLGLLLQSNMDYYSDEDGKSSKGMTVEEIIDECKLFYFAGMETTAVLLTWTMVSLSMHPEWQDRAREEILQVFGRNKPDINGVSRLKVVTMVLHEVLRLYPPVVMMNRRTYKEIELGGVRYPAGVMLSLPVLFIHRDAAAWGHDAGEFDPGRFAEGVARACKDPGAGAFFPFSWGPRICIGQNFALLEAKVALGMILQRFAFELSPAYAHAPYTVLTLHPQHGVPVRLRRL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_01G0409600	OsZS97_01T0409600.3	Chr01	26588349	26592468	+	makerRMon
CDS seq	ATGCAGAGAGAAAAAGAAGCAATGGGCATCGGCATCGGCATCGGCATCGGCACCGGCACCGGCGCGGCGCTACCATTCGGCGAGGCCTCGCCGTGGAGCCTGCTCGGCGGCGCGGTGGCCGCGCTGCTGCTGGTCTGGGCCGCGCAGATGCTGGAGTGGGCCTGGCTGGCCCCGCGGCGGATGGAACGGGCCCTCAGGGCCCAGGGCCTGAGGGGCACCCAGTACCGCTTCCTCCATGGCGACCTCACCGAGGACCTGCGGCTCGTCACGGCGGCCCGCTCCAAGCCCGTGCCCATGGACCGGCCCCACGACTTCATCCCGCGCGTCGCGCCTCTGCTTCACCGTGCCTTGGAGGAACACGGTAGGGTTTCTTTTACATGGTTCGGGCCAATGCCAAGGGTTACAATCACTGATCCGGACTTGGTCCGTGAAGTTCTATCGAACAAATTTGGTCACTTTGAGAAGACAAAGCTGGCCACTCGGCTTTCTAAGTTACTCGTTGGTGGGCTTGTGATCCTTCATGGTGAAAAATGGGTCAAACATAGGAGGATTATGAATCCAGCCTTTCATGCAGAAAAGCTAAAGCGGATGTTGCCAGCATTCTCCGCATCTTGTAGCGAACTAATTGGCAGATGGGAGAATGCGGTTGCTGCTTCTGTTGGAAAAGCCGAGCTGGACATTTGGCCAGATTTTCAGAATTTATCAGGAGATGTTATTTCAAGAGCAGCATTTGGTGTCAGACACCACGAAGGCAGACAAATTTTCCTACTTCAGGCCGAGCAAGCTGAACGCCTTGTTCAATCTTTCCGGAGTAATTACATCCCAGGCTTATCTCTTTTACCGACAGAAAACAACAGAAGGATGAAGGCAATAGACAGAGAGATCAAGAGTATTCTAAGAGGCATAATAGAAAAGAGGCAGAAGGCCACGAAGAACGGCGAAGCCAGCAAGGACGATCTGCTCGGCTTGCTCCTACAATCCAACATGGATTATTACAGCGACGAGGACGGCAAATCCAGCAAGGGGATGACCGTCGAGGAGATCATCGACGAATGCAAGCTGTTCTACTTCGCCGGGATGGAGACAACCGCCGTGTTGCTCACCTGGACAATGGTTTCCCTGAGCATGCACCCGGAGTGGCAGGATCGCGCCAGGGAGGAGATTCTGCAGGTCTTTGGGCGAAACAAACCTGATATCAATGGCGTTAGCCGCCTGAAAGTCGTGACCATGGTGCTGCACGAGGTGCTGCGCCTGTACCCGCCGGTGGTGATGATGAACCGCCGCACGTACAAGGAGATCGAGCTCGGCGGCGTCAGGTACCCGGCGGGCGTGATGCTGTCGCTGCCCGTGCTGTTCATCCACCGCGACGCCGCCGCGTGGGGGCACGACGCCGGCGAGTTCGACCCGGGGAGGTTCGCGGAGGGCGTGGCCAGGGCGTGCAAGGACCCCGGCGCCGGCGCGTTCTTCCCGTTCAGCTGGGGCCCGCGCATCTGCATCGGCCAGAACTTCGCACTGCTGGAGGCCAAGGTGGCGCTCGGCATGATCCTGCAGCGCTTCGCGTTCGAGCTGTCGCCGGCGTACGCGCACGCGCCCTACACCGTGCTGACGCTGCACCCGCAGCACGGCGTTCCGGTTAGGCTGCGCCGACTCTGA More
Protein seq	MQREKEAMGIGIGIGIGTGTGAALPFGEASPWSLLGGAVAALLLVWAAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLVTAARSKPVPMDRPHDFIPRVAPLLHRALEEHGRVSFTWFGPMPRVTITDPDLVREVLSNKFGHFEKTKLATRLSKLLVGGLVILHGEKWVKHRRIMNPAFHAEKLKRMLPAFSASCSELIGRWENAVAASVGKAELDIWPDFQNLSGDVISRAAFGVRHHEGRQIFLLQAEQAERLVQSFRSNYIPGLSLLPTENNRRMKAIDREIKSILRGIIEKRQKATKNGEASKDDLLGLLLQSNMDYYSDEDGKSSKGMTVEEIIDECKLFYFAGMETTAVLLTWTMVSLSMHPEWQDRAREEILQVFGRNKPDINGVSRLKVVTMVLHEVLRLYPPVVMMNRRTYKEIELGGVRYPAGVMLSLPVLFIHRDAAAWGHDAGEFDPGRFAEGVARACKDPGAGAFFPFSWGPRICIGQNFALLEAKVALGMILQRFAFELSPAYAHAPYTVLTLHPQHGVPVRLRRL More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.238406	7.1368185	0.089831

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0627400	RBH	2.295184	1.390115	1.377823
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g43700	RBH	1.705036	0.897580	0.346982
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0627400	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0026010	SBH	0.380584	1.018520	0.660300
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0025650	SBH	0.089938	0.415210	0.324732
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0025980	RBH	0.343233	0.0	1.553312
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0025250	RBH	0.000000	0.141043	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0025000	RBH	10.386683	12.951579	6.181221
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0421000	SBH	0.892174	1.455999	0.3114915
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0024670	RBH	0.081862	0.447179	0.596240
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0385300	SBH	5.83854	4.3827855	1.476269
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0024950	RBH	0.342327	0.442177	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0024940	RBH	0.864597	2.947353	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0025180	RBH	6.671305	19.920635	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0025180	RBH	0.0	0.553892	1.066489
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0025060	RBH	0.0	0.676423	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G025320	RBH	0.229186	0.416659	0.843846
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0025100	SBH	0.0	0.000000	0.227597

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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