Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0386300 | OGI:01013090 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:25245002-25246447 | ||||||||
| Gene Symbol | OsSTA22, - | ||||||||||
| DNA seq | ATGTTGGAGGAATTTCTTCCAAACATATACTGCATTAGTTCTCAACAAGGGTTGCATTGCATAGCGTGCAATATCACCAACACAATGGCTAGAACGGCTAGAACTCCAGTTCCTCCACGATCCTCCTCGATTGCAGCTGCAGTCACTTGCCTTTTGCTAGTCGTCTCCCGAGACGCCATCACCAGCGCAGCCGCATCTCCCAAAGCTCCAGCATCCACCGGTGGCTGCATCGCGGCCGAGAGGGATGCCCTGCTCTCGTTCAAGGCTGGCATCACAAGCGACCCCAAGAAACGCCTCAGCTCATGGCTAGGTGAGAATTGCTGCCAGTGGAGCGGCGTGAGGTGTAGCAACAGGACGGGGCATGTTATCATCCTCAACCTCAGCAACACTATCTTACAGCATGATGATCCGCATTATTACAAGTTTCCCAATGTTGATTTTCAGTTGTATGGGATCATAAGTTCGTCTTTGGTAAGCCTGCGACAACTGAAACGCCTGGATCTTAGCGGGAACATCCTTGGAGAAAGTATGCCAGAGTTCTTGGGCTCCCTTCAAAGTTTGACCCATCTCAACCTAGCATATATGGGTTTTTACGGCAGAGTACCTCATCAGCTTGGTAATCTGTCTAATTTGCAGTTTCTTGACATAACACCAAGATTTTATGAGTATCCTCCTATGCACGCAGCTGACATCTCATGGTTGGCACGCCTTCCTTCATTGAAGTATCTTGATATGAGTTATGTGAATCTAAGCTCAGTGGTTGATTGGGTCCGTCCAGTGAATATGCTTTCCCGTCTTGAGGTTCTACGCCTTACAGGGTGTTGGATCATGAGTTCATCATCAACAGGACTCACCAATCTGACAAGCCTTGAAACACTTGACCTCTCTGAGAACACTTTGTTTGGCACGGTAATTCCCAACTGGGTGTGGAGCATGAAGACGGTTAAGATGCTTAACCTGGCCTTATGCCACTTGTCTGGTTCATTTCCTGATGGATTAGGCAACTTAACTTTGTTGGAAGGCCTTGACCTTGGAGGTGATAGCTACCTTGGGACGCTGCCATCAACATTAAACAACACTTGCAATCTGAGGGTCCTATACCTCAATGAGAATTTGATCGGCGTGGAAATCAAAGATCTGATGGATAAGCTTCCAAGGTGTACTTGGAATAAATTGGAGGAGCTTGATTTGTCTTATAATGACATTACTGGAAACCTGGATTGGCTGGGGAGCCAAACTAGCTTAACAAGCCTTTACCTATCTTGGAACAAATTCAGTGGTCATTTGCCCTTGGTAATCAGAGAAATGACTAATTTGATAACTCTATTGTCATGTACGGTCGCACATATACCAGGCGCGGGCGAGCACGTGATGTGCGCCGAGCAGCTGAACGCGCGGATCGCGCGCGCGACGAGCCAGCTCCCAGTGGCTAGAAAAGGAAGTTAG
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| CDS seq | ATGTTGGAGGAATTTCTTCCAAACATATACTGCATTAGTTCTCAACAAGGGTTGCATTGCATAGCGTGCAATATCACCAACACAATGGCTAGAACGGCTAGAACTCCAGTTCCTCCACGATCCTCCTCGATTGCAGCTGCAGTCACTTGCCTTTTGCTAGTCGTCTCCCGAGACGCCATCACCAGCGCAGCCGCATCTCCCAAAGCTCCAGCATCCACCGGTGGCTGCATCGCGGCCGAGAGGGATGCCCTGCTCTCGTTCAAGGCTGGCATCACAAGCGACCCCAAGAAACGCCTCAGCTCATGGCTAGGTGAGAATTGCTGCCAGTGGAGCGGCGTGAGGTGTAGCAACAGGACGGGGCATGTTATCATCCTCAACCTCAGCAACACTATCTTACAGCATGATGATCCGCATTATTACAAGTTTCCCAATGTTGATTTTCAGTTGTATGGGATCATAAGTTCGTCTTTGGTAAGCCTGCGACAACTGAAACGCCTGGATCTTAGCGGGAACATCCTTGGAGAAAGTATGCCAGAGTTCTTGGGCTCCCTTCAAAGTTTGACCCATCTCAACCTAGCATATATGGGTTTTTACGGCAGAGTACCTCATCAGCTTGGTAATCTGTCTAATTTGCAGTTTCTTGACATAACACCAAGATTTTATGAGTATCCTCCTATGCACGCAGCTGACATCTCATGGTTGGCACGCCTTCCTTCATTGAAGTATCTTGATATGAGTTATGTGAATCTAAGCTCAGTGGTTGATTGGGTCCGTCCAGTGAATATGCTTTCCCGTCTTGAGGTTCTACGCCTTACAGGGTGTTGGATCATGAGTTCATCATCAACAGGACTCACCAATCTGACAAGCCTTGAAACACTTGACCTCTCTGAGAACACTTTGTTTGGCACGGTAATTCCCAACTGGGTGTGGAGCATGAAGACGGTTAAGATGCTTAACCTGGCCTTATGCCACTTGTCTGGTTCATTTCCTGATGGATTAGGCAACTTAACTTTGTTGGAAGGCCTTGACCTTGGAGGTGATAGCTACCTTGGGACGCTGCCATCAACATTAAACAACACTTGCAATCTGAGGGTCCTATACCTCAATGAGAATTTGATCGGCGTGGAAATCAAAGATCTGATGGATAAGCTTCCAAGGTGTACTTGGAATAAATTGGAGGAGCTTGATTTGTCTTATAATGACATTACTGGAAACCTGGATTGGCTGGGGAGCCAAACTAGCTTAACAAGCCTTTACCTATCTTGGAACAAATTCAGTGGTCATTTGCCCTTGGTAATCAGAGAAATGACTAATTTGATAACTCTATTGTCATGTACGGTCGCACATATACCAGGCGCGGGCGAGCACGTGATGTGCGCCGAGCAGCTGAACGCGCGGATCGCGCGCGCGACGAGCCAGCTCCCAGTGGCTAGAAAAGGAAGTTAG
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| Protein seq | MLEEFLPNIYCISSQQGLHCIACNITNTMARTARTPVPPRSSSIAAAVTCLLLVVSRDAITSAAASPKAPASTGGCIAAERDALLSFKAGITSDPKKRLSSWLGENCCQWSGVRCSNRTGHVIILNLSNTILQHDDPHYYKFPNVDFQLYGIISSSLVSLRQLKRLDLSGNILGESMPEFLGSLQSLTHLNLAYMGFYGRVPHQLGNLSNLQFLDITPRFYEYPPMHAADISWLARLPSLKYLDMSYVNLSSVVDWVRPVNMLSRLEVLRLTGCWIMSSSSTGLTNLTSLETLDLSENTLFGTVIPNWVWSMKTVKMLNLALCHLSGSFPDGLGNLTLLEGLDLGGDSYLGTLPSTLNNTCNLRVLYLNENLIGVEIKDLMDKLPRCTWNKLEELDLSYNDITGNLDWLGSQTSLTSLYLSWNKFSGHLPLVIREMTNLITLLSCTVAHIPGAGEHVMCAEQLNARIARATSQLPVARKGS |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0386300 | OsZS97_01T0386300.1 | Chr01 | 25245002 | 25246447 | + | makerRMon | ||
| CDS seq | ATGTTGGAGGAATTTCTTCCAAACATATACTGCATTAGTTCTCAACAAGGGTTGCATTGCATAGCGTGCAATATCACCAACACAATGGCTAGAACGGCTAGAACTCCAGTTCCTCCACGATCCTCCTCGATTGCAGCTGCAGTCACTTGCCTTTTGCTAGTCGTCTCCCGAGACGCCATCACCAGCGCAGCCGCATCTCCCAAAGCTCCAGCATCCACCGGTGGCTGCATCGCGGCCGAGAGGGATGCCCTGCTCTCGTTCAAGGCTGGCATCACAAGCGACCCCAAGAAACGCCTCAGCTCATGGCTAGGTGAGAATTGCTGCCAGTGGAGCGGCGTGAGGTGTAGCAACAGGACGGGGCATGTTATCATCCTCAACCTCAGCAACACTATCTTACAGCATGATGATCCGCATTATTACAAGTTTCCCAATGTTGATTTTCAGTTGTATGGGATCATAAGTTCGTCTTTGGTAAGCCTGCGACAACTGAAACGCCTGGATCTTAGCGGGAACATCCTTGGAGAAAGTATGCCAGAGTTCTTGGGCTCCCTTCAAAGTTTGACCCATCTCAACCTAGCATATATGGGTTTTTACGGCAGAGTACCTCATCAGCTTGGTAATCTGTCTAATTTGCAGTTTCTTGACATAACACCAAGATTTTATGAGTATCCTCCTATGCACGCAGCTGACATCTCATGGTTGGCACGCCTTCCTTCATTGAAGTATCTTGATATGAGTTATGTGAATCTAAGCTCAGTGGTTGATTGGGTCCGTCCAGTGAATATGCTTTCCCGTCTTGAGGTTCTACGCCTTACAGGGTGTTGGATCATGAGTTCATCATCAACAGGACTCACCAATCTGACAAGCCTTGAAACACTTGACCTCTCTGAGAACACTTTGTTTGGCACGGTAATTCCCAACTGGGTGTGGAGCATGAAGACGGTTAAGATGCTTAACCTGGCCTTATGCCACTTGTCTGGTTCATTTCCTGATGGATTAGGCAACTTAACTTTGTTGGAAGGCCTTGACCTTGGAGGTGATAGCTACCTTGGGACGCTGCCATCAACATTAAACAACACTTGCAATCTGAGGGTCCTATACCTCAATGAGAATTTGATCGGCGTGGAAATCAAAGATCTGATGGATAAGCTTCCAAGGTGTACTTGGAATAAATTGGAGGAGCTTGATTTGTCTTATAATGACATTACTGGAAACCTGGATTGGCTGGGGAGCCAAACTAGCTTAACAAGCCTTTACCTATCTTGGAACAAATTCAGTGGTCATTTGCCCTTGGTAATCAGAGAAATGACTAATTTGATAACTCTATTGTCATGTACGGTCGCACATATACCAGGCGCGGGCGAGCACGTGATGTGCGCCGAGCAGCTGAACGCGCGGATCGCGCGCGCGACGAGCCAGCTCCCAGTGGCTAGAAAAGGAAGTTAG
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| Protein seq | MLEEFLPNIYCISSQQGLHCIACNITNTMARTARTPVPPRSSSIAAAVTCLLLVVSRDAITSAAASPKAPASTGGCIAAERDALLSFKAGITSDPKKRLSSWLGENCCQWSGVRCSNRTGHVIILNLSNTILQHDDPHYYKFPNVDFQLYGIISSSLVSLRQLKRLDLSGNILGESMPEFLGSLQSLTHLNLAYMGFYGRVPHQLGNLSNLQFLDITPRFYEYPPMHAADISWLARLPSLKYLDMSYVNLSSVVDWVRPVNMLSRLEVLRLTGCWIMSSSSTGLTNLTSLETLDLSENTLFGTVIPNWVWSMKTVKMLNLALCHLSGSFPDGLGNLTLLEGLDLGGDSYLGTLPSTLNNTCNLRVLYLNENLIGVEIKDLMDKLPRCTWNKLEELDLSYNDITGNLDWLGSQTSLTSLYLSWNKFSGHLPLVIREMTNLITLLSCTVAHIPGAGEHVMCAEQLNARIARATSQLPVARKGS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.3995995 | 1.9358075 | 1.0150115 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0603800 | RBH | 0.640083 | 0.837041 | 0.999380 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41930 | RBH | 0.330381 | 0.432374 | 0.217218 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0603800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024300 | SBH | 0.097523 | 0.0 | 0.252339 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0024010 | RBH | 0.087010 | 0.000000 | 0.256139 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024320 | RBH | 0.000000 | 0.362509 | 0.276520 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023680 | RBH | 0.180688 | 0.154439 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023440 | SBH | 2.775532 | 0.472948 | 3.969628 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0397600 | RBH | 0.2911085 | 2.632865 | 0.4291925 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023240 | SBH | 0.015733 | 0.067010 | 0.040080 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0471700 | SBH | 5.374635 | 2.1254265 | 1.267234 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023380 | SBH | 0.048732 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023340 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023590 | SBH | 0.000000 | 1.506554 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023610 | SBH | 0.082126 | 0.215587 | 0.227766 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023510 | SBH | 0.042830 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023710 | SBH | 0.588999 | 0.462985 | 2.210793 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023420 | RBH | 0.877057 | 0.810886 | 3.737909 |
