Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0062000 | OGI:01012520 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:3337507-3340997 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATAAATCACACATGCCAACTCGTTGATTCAGAACATCACTAGTATGTAATGTAAACTCTGTATATCAGTATATGATGTGTGCATCCTACTGGCTTGTGTAACTCTAAAGTAAATAAATATAACACCATTATCACCCATACTTACAGTGATTCAAATATTATCTTGCGACAACACTGACATGGCCCTGATTACAATAATGCACTGCAAGTGACCTTGATACAGAAAAAAGTTTATTTCAATACATGATACAGAGGGCTCTCTGTCTTACTGTAGCCTGTTTTCTAATGGGTATTCCCCATGATACTACAACAGCAATGGCCAACCCAAGGCCGAATCCCAATCCAGAAAAGAGGAACAACACAATATCTACGGATTTCTTCTTGGAAGGGATCACATTCAGAATTGTCATGTTGATGCAACCTTTAGATAGCGGAGGACCACACAAATCATTATTCCCCAGAAATGAGCTGTTGGTGAATGTCAAGAAATGAAGTGATTCAGGTATTTTTCCCTCAAGCTTGTTGTAGGATAGGTTTAGCATTTCGAGGAAGTCCAAGGATGCTAATTCTTGTGGAATGACTCCTGAAAGCTGATTTGAAGATAGATCCAAAGCTTCCAGCTGCTTCAGCCCACCAAGTTGAGATGGAATTGGCCCAGTGAGGAAGTTATGTGACATATTTATCCCATGAGTTAAAACAAGTTCCCCAACAATTTCTGGGATGCTACCATTGAATGCATTATTGGAGAAATCAATGAATACAAGGGTTCTTAGTATTTGAGCAAGTGTGGTGTCATGACCTTTGTATGTGAGTGAGGCTTTATATCTATATACTAGTCCTACACTTGGCACAGCATGATCCATGACCAATGATGTATTTGTGTCTATATGTAGCATCGACTCCAACTTCTTAAACCACTTGTCTTTGGGCAACGGACCAGAGAAGTTATTTGAGGATATGTCAATAATTATTGCATTTGGAAATGCACATGTGCTTTCTTCATCGGTGAGAGATTGAACGACATGTCCAAATAGCTTATTGGATTTCAGTACAAGCACTTGGAGTCTACGAAGTTTACTCATCCAACATGGGAAAATGTCATTTATTTGATTTTTCCCAGCATCAAGGATCTCCAAATTTTGACATGCAAGTAGGGATCTGGGTAGCTGTCCTTCAATCCTATTGCCACTAAAATATAGTGCATGAAATGAGCAGCCTTCCTTTATAGTATCTGGGATCTCCCCATCGAGTTGATTTGCATTTAGATTTAATATTTGTATTCCATTAACGTTCTCGATCAAACAAGATGGTATTGAGCCACTAAAGTTGTTGTTAGAGAGATCAAGGTATTGTAATTCAGTTGCAGTACAGAAAGATGGTGGGATTTCTCCGGAGAAGTTGTTTCCAGGGGCATTGAAAAGTGTGACATGACTAAGATGGGCAGTGAAATTAAAAGGAATCGATGAGAACATGTTGTTTGAGTAATCTAGAAATCTTGCAGAACCTTGAGGTATAGGTATAGTCCCCTCAAACATGTTGTTGCTAAGATCAAGCCAATCAATTTGTAAAGGGATAAAAGGGTTAGATCCAACACTAGTAAATTTATTATGTGCTAAAATCAAACTAGCAACGCCAGAATCATTCCAAGACTCCCATGCCCACGATGGTATAGCCCCATGGATTTGGTTTTTTGAAAGGTCGAGCCAAAGGAGTTCATCTTGACTCCTCAAGAAATCAGGGAATTTAGTGATGTTGCAACCCGATAAAGCTAATATTTGTAGTTTAGGGATGTGTGTTGATGAAGAATTGACTTTTCCATCCACCACCACAAGATTATTATCAGATATATCCAAGTAACGGAGGTGTTGTAGTCCCCATAATGATGCAAGTTTCATTGTACCGACAAGATTGTTTGAATTAAGGAAGAGTGTGCTCAGATTGGTGAAGTTTGAGATATGTTGTGGTAGTTTTCCTGAAAAGTTGCATTCATACAACACTAATTTTCTCAATTTCGTTAACTTACCTAAAAAAGAAGGGATAGATCCAGTTAGACCACACCTAGAGAATTGAAGGATTGTTAAAGAGGTAAGGTTTGTGATCCATGATGGTATGGTTCCTACTATTGTTGTTCCAGAAATCTCCAACGAATTCAATGATTTAAGCCACCCGATTGATGAGGGCAGCTCCCCTGAAAACTGACTTGCACCGACGCCAAGGTTCTTCAAATATTTGAGATTTCCAATGGAACTTGGTATTTCACCGTAGAAACTAGTCTCAGAGACAAATATATTTTCCAAATTACTAGCAACTGAGAAATTTGGTAACGAACCAGATAGTTCTAGATTATTGTAAAGATCAACTGTTACTAATTTCTTGTGTTGGAAGATTAATGGAGATACCTGTCCTTGAAGAAAATTGTGTCCCAGTTGTAGAACACGCAAAGAGGAGAAGGTGGCGAAGTTTGGAATGGGACCAGACAAATCATTAAACCGTAGGTCAATAACAGCAAGCGAGTGCATGGCAGAAAAGGATCCACAAATAGGACCAGAGAGCCCACAGTTTGGTAAGCTAAGAACCCGAAGGTTAGGAGTGGACGAGGATAGAGCATCGCACCATGTCATCCCGTTGTCGGACAAGTCCACAGCGCCGAGGTAGAGCTCCCTCAATTTTTTATGATTTGCGATTAAAGTTTCAAAGTTGGCTCTTTGAACGCTAGATTCAACTGAATCAAAGGACAACACAGCATGACCTTGTGTGAATTCTTCGACTTCAAATCGAGTAGATAGGTCGAGAGATACTAGATTTGTTAGGCGACTGATGCTAGCGGTTGGTACCTGGCCCACGAAATCGGAGCTGGAGAGGTTGAGATAGGTGAGCATGGTGAGCCGCTCAAACCCTGTCTGCGGGAGTTGGGATCCATTGAAGCTGTTGCAAGCGAGGTTGAGGTGGTTGAGGGAGGTTAGATGGAAGATCGCAGGATCAAGACCGCCGCTCTCCAATCTACGCCCTCCCAGGTCCAGAGACGTCACACGCCCATCCCCATTCCTGCAGTGGATGCCCTCCCAATGGCAACAGTCTGTGCCGGCCTTCCATGACCGGAAGGTGGAACTGGAGTTTTTGGTGATGGAGAACGAACGTTTCAACCGGAGCAGCTCCGATGCCTGGTCCGGCAAGCATGGAACAACCGCCGGCGGCAGGGCTCCGGTGTGGTTGGCGTACGTAGCTGCTGATGAAGAAGGGACAATAATGAGCTGGGTGTGTAAGAGGATCAGCATCAACGGCAACACCAATGGCTTGTAACGGGTCATTGTGGAGTAGCAACTAGCAAGTACAGCAGTTTGATTGGGTTTTCTGCTAGTCTGCTATACGTAAGAGGGTGTATCGATCGGTGTATGGACGGAGGATTCTACCGCATACCCTCGCACATTCTTATACACGATAACTCGCCAACTCGGATTCGTACGTTGCTAGCTGGATTAACAGAAGATCA
More
|
||||||||||
| CDS seq | ATGACCCGTTACAAGCCATTGGTGTTGCCGTTGATGCTGATCCTCTTACACACCCAGCTCATTATTGTCCCTTCTTCATCAGCAGCTACGTACGCCAACCACACCGGAGCCCTGCCGCCGGCGGTTGTTCCATGCTTGCCGGACCAGGCATCGGAGCTGCTCCGGTTGAAACGTTCGTTCTCCATCACCAAAAACTCCAGTTCCACCTTCCGGTCATGGAAGGCCGGCACAGACTGTTGCCATTGGGAGGGCATCCACTGCAGGAATGGGGATGGGCGTGTGACGTCTCTGGACCTGGGAGGGCGTAGATTGGAGAGCGGCGGTCTTGATCCTGCGATCTTCCATCTAACCTCCCTCAACCACCTCAACCTCGCTTGCAACAGCTTCAATGGATCCCAACTCCCGCAGACAGGGTTTGAGCGGCTCACCATGCTCACCTATCTCAACCTCTCCAGCTCCGATTTCGTGGGCCAGGTACCAACCGCTAGCATCAGTCGCCTAACAAATCTAGTATCTCTCGACCTATCTACTCGATTTGAAGTCGAAGAATTCACACAAGGTCATGCTGTGTTGTCCTTTGATTCAGTTGAATCTAGCGTTCAAAGAGCCAACTTTGAAACTTTAATCGCAAATCATAAAAAATTGAGGGAGCTCTACCTCGGCGCTGTGGACTTGTCCGACAACGGGATGACATGGTGCGATGCTCTATCCTCGTCCACTCCTAACCTTCGGGTTCTTAGCTTACCAAACTGTGGGCTCTCTGGTCCTATTTGTGGATCCTTTTCTGCCATGCACTCGCTTGCTGTTATTGACCTACGGTTTAATGATTTGTCTGGTCCCATTCCAAACTTCGCCACCTTCTCCTCTTTGCGTGTTCTACAACTGGGACACAATTTTCTTCAAGGACAGGTATCTCCATTAATCTTCCAACACAAGAAATTAGTAACAGTTGATCTTTACAATAATCTAGAACTATCTGGTTCGTTACCAAATTTCTCAGTTGCTAGTAATTTGGAAAATATATTTGTCTCTGAGACTAGTTTCTACGGTGAAATACCAAGTTCCATTGGAAATCTCAAATATTTGAAGAACCTTGGCGTCGGTGCAAGTCAGTTTTCAGGGGAGCTGCCCTCATCAATCGGGTGGCTTAAATCATTGAATTCGTTGGAGATTTCTGGAACAACAATAGTAGGAACCATACCATCATGGATCACAAACCTTACCTCTTTAACAATCCTTCAATTCTCTAGGTGTGGTCTAACTGGATCTATCCCTTCTTTTTTAGGACTAGTATATAGATATAAAGCCTCACTCACATACAAAGGTCATGACACCACACTTGCTCAAATACTAAGAACCCTTGTATTCATTGATTTCTCCAATAATGCATTCAATGGTAGCATCCCAGAAATTGTTGGGGAACTTGTTTTAACTCATGGGATAAATATGTCACATAACTTCCTCACTGGGCCAATTCCATCTCAACTTGGTGGGCTGAAGCAGCTGGAAGCTTTGGATCTATCTTCAAATCAGCTTTCAGGAGTCATTCCACAAGAATTAGCATCCTTGGACTTCCTCGAAATGCTAAACCTATCCTACAACAAGCTTGAGGGAAAAATACCTGAATCACTTCATTTCTTGACATTCACCAACAGCTCATTTCTGGGGAATAATGATTTGTGTGGTCCTCCGCTATCTAAAGGTTGCATCAACATGACAATTCTGAATGTGATCCCTTCCAAGAAGAAATCCGTAGATATTGTGTTGTTCCTCTTTTCTGGATTGGGATTCGGCCTTGGGTTGGCCATTGCTGTTGTAGTATCATGGGGAATACCCATTAGAAAACAGGCTACAGTAAGACAGAGAGCCCTCTGTATCATGTATTGA
More
|
||||||||||
| Protein seq | MTRYKPLVLPLMLILLHTQLIIVPSSSAATYANHTGALPPAVVPCLPDQASELLRLKRSFSITKNSSSTFRSWKAGTDCCHWEGIHCRNGDGRVTSLDLGGRRLESGGLDPAIFHLTSLNHLNLACNSFNGSQLPQTGFERLTMLTYLNLSSSDFVGQVPTASISRLTNLVSLDLSTRFEVEEFTQGHAVLSFDSVESSVQRANFETLIANHKKLRELYLGAVDLSDNGMTWCDALSSSTPNLRVLSLPNCGLSGPICGSFSAMHSLAVIDLRFNDLSGPIPNFATFSSLRVLQLGHNFLQGQVSPLIFQHKKLVTVDLYNNLELSGSLPNFSVASNLENIFVSETSFYGEIPSSIGNLKYLKNLGVGASQFSGELPSSIGWLKSLNSLEISGTTIVGTIPSWITNLTSLTILQFSRCGLTGSIPSFLGLVYRYKASLTYKGHDTTLAQILRTLVFIDFSNNAFNGSIPEIVGELVLTHGINMSHNFLTGPIPSQLGGLKQLEALDLSSNQLSGVIPQELASLDFLEMLNLSYNKLEGKIPESLHFLTFTNSSFLGNNDLCGPPLSKGCINMTILNVIPSKKKSVDIVLFLFSGLGFGLGLAIAVVVSWGIPIRKQATVRQRALCIMY |
||||||||||
| Function | Receptor-like protein 9DC3 [UniProtKB/Swiss-Prot:Q5MR23] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0062000 | OsZS97_01T0062000.1 | Chr01 | 3337744 | 3340815 | - | makerRMon | ||
| CDS seq | ATGACCCGTTACAAGCCATTGGTGTTGCCGTTGATGCTGATCCTCTTACACACCCAGCTCATTATTGTCCCTTCTTCATCAGCAGCTACGTACGCCAACCACACCGGAGCCCTGCCGCCGGCGGTTGTTCCATGCTTGCCGGACCAGGCATCGGAGCTGCTCCGGTTGAAACGTTCGTTCTCCATCACCAAAAACTCCAGTTCCACCTTCCGGTCATGGAAGGCCGGCACAGACTGTTGCCATTGGGAGGGCATCCACTGCAGGAATGGGGATGGGCGTGTGACGTCTCTGGACCTGGGAGGGCGTAGATTGGAGAGCGGCGGTCTTGATCCTGCGATCTTCCATCTAACCTCCCTCAACCACCTCAACCTCGCTTGCAACAGCTTCAATGGATCCCAACTCCCGCAGACAGGGTTTGAGCGGCTCACCATGCTCACCTATCTCAACCTCTCCAGCTCCGATTTCGTGGGCCAGGTACCAACCGCTAGCATCAGTCGCCTAACAAATCTAGTATCTCTCGACCTATCTACTCGATTTGAAGTCGAAGAATTCACACAAGGTCATGCTGTGTTGTCCTTTGATTCAGTTGAATCTAGCGTTCAAAGAGCCAACTTTGAAACTTTAATCGCAAATCATAAAAAATTGAGGGAGCTCTACCTCGGCGCTGTGGACTTGTCCGACAACGGGATGACATGGTGCGATGCTCTATCCTCGTCCACTCCTAACCTTCGGGTTCTTAGCTTACCAAACTGTGGGCTCTCTGGTCCTATTTGTGGATCCTTTTCTGCCATGCACTCGCTTGCTGTTATTGACCTACGGTTTAATGATTTGTCTGGTCCCATTCCAAACTTCGCCACCTTCTCCTCTTTGCGTGTTCTACAACTGGGACACAATTTTCTTCAAGGACAGGTATCTCCATTAATCTTCCAACACAAGAAATTAGTAACAGTTGATCTTTACAATAATCTAGAACTATCTGGTTCGTTACCAAATTTCTCAGTTGCTAGTAATTTGGAAAATATATTTGTCTCTGAGACTAGTTTCTACGGTGAAATACCAAGTTCCATTGGAAATCTCAAATATTTGAAGAACCTTGGCGTCGGTGCAAGTCAGTTTTCAGGGGAGCTGCCCTCATCAATCGGGTGGCTTAAATCATTGAATTCGTTGGAGATTTCTGGAACAACAATAGTAGGAACCATACCATCATGGATCACAAACCTTACCTCTTTAACAATCCTTCAATTCTCTAGGTGTGGTCTAACTGGATCTATCCCTTCTTTTTTAGGACTAGTATATAGATATAAAGCCTCACTCACATACAAAGGTCATGACACCACACTTGCTCAAATACTAAGAACCCTTGTATTCATTGATTTCTCCAATAATGCATTCAATGGTAGCATCCCAGAAATTGTTGGGGAACTTGTTTTAACTCATGGGATAAATATGTCACATAACTTCCTCACTGGGCCAATTCCATCTCAACTTGGTGGGCTGAAGCAGCTGGAAGCTTTGGATCTATCTTCAAATCAGCTTTCAGGAGTCATTCCACAAGAATTAGCATCCTTGGACTTCCTCGAAATGCTAAACCTATCCTACAACAAGCTTGAGGGAAAAATACCTGAATCACTTCATTTCTTGACATTCACCAACAGCTCATTTCTGGGGAATAATGATTTGTGTGGTCCTCCGCTATCTAAAGGTTGCATCAACATGACAATTCTGAATGTGATCCCTTCCAAGAAGAAATCCGTAGATATTGTGTTGTTCCTCTTTTCTGGATTGGGATTCGGCCTTGGGTTGGCCATTGCTGTTGTAGTATCATGGGGAATACCCATTAGAAAACAGGCTACAGTAAGACAGAGAGCCCTCTGTATCATGTATTGA
More
|
|||||||
| Protein seq | MTRYKPLVLPLMLILLHTQLIIVPSSSAATYANHTGALPPAVVPCLPDQASELLRLKRSFSITKNSSSTFRSWKAGTDCCHWEGIHCRNGDGRVTSLDLGGRRLESGGLDPAIFHLTSLNHLNLACNSFNGSQLPQTGFERLTMLTYLNLSSSDFVGQVPTASISRLTNLVSLDLSTRFEVEEFTQGHAVLSFDSVESSVQRANFETLIANHKKLRELYLGAVDLSDNGMTWCDALSSSTPNLRVLSLPNCGLSGPICGSFSAMHSLAVIDLRFNDLSGPIPNFATFSSLRVLQLGHNFLQGQVSPLIFQHKKLVTVDLYNNLELSGSLPNFSVASNLENIFVSETSFYGEIPSSIGNLKYLKNLGVGASQFSGELPSSIGWLKSLNSLEISGTTIVGTIPSWITNLTSLTILQFSRCGLTGSIPSFLGLVYRYKASLTYKGHDTTLAQILRTLVFIDFSNNAFNGSIPEIVGELVLTHGINMSHNFLTGPIPSQLGGLKQLEALDLSSNQLSGVIPQELASLDFLEMLNLSYNKLEGKIPESLHFLTFTNSSFLGNNDLCGPPLSKGCINMTILNVIPSKKKSVDIVLFLFSGLGFGLGLAIAVVVSWGIPIRKQATVRQRALCIMY
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0062000 | OsZS97_01T0062000.2 | Chr01 | 3337507 | 3340997 | - | makerRMon | ||
| CDS seq | ATGACCCGTTACAAGCCATTGGTGTTGCCGTTGATGCTGATCCTCTTACACACCCAGCTCATTATTGTCCCTTCTTCATCAGCAGCTACGTACGCCAACCACACCGGAGCCCTGCCGCCGGCGGTTGTTCCATGCTTGCCGGACCAGGCATCGGAGCTGCTCCGGTTGAAACGTTCGTTCTCCATCACCAAAAACTCCAGTTCCACCTTCCGGTCATGGAAGGCCGGCACAGACTGTTGCCATTGGGAGGGCATCCACTGCAGGAATGGGGATGGGCGTGTGACGTCTCTGGACCTGGGAGGGCGTAGATTGGAGAGCGGCGGTCTTGATCCTGCGATCTTCCATCTAACCTCCCTCAACCACCTCAACCTCGCTTGCAACAGCTTCAATGGATCCCAACTCCCGCAGACAGGGTTTGAGCGGCTCACCATGCTCACCTATCTCAACCTCTCCAGCTCCGATTTCGTGGGCCAGTTGAATCTAGCGTTCAAAGAGCCAACTTTGAAACTTTAA
More
|
|||||||
| Protein seq | MTRYKPLVLPLMLILLHTQLIIVPSSSAATYANHTGALPPAVVPCLPDQASELLRLKRSFSITKNSSSTFRSWKAGTDCCHWEGIHCRNGDGRVTSLDLGGRRLESGGLDPAIFHLTSLNHLNLACNSFNGSQLPQTGFERLTMLTYLNLSSSDFVGQLNLAFKEPTLKL |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.9710145 | 1.120284 | 2.4665285 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0162500 | SBH | 0.310161 | 0.0 | 0.379350 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g06520 | SBH | 0.547116 | 0.600843 | 0.587500 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0162500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0004470 | SBH | 0.559630 | 0.0 | 0.906528 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0004220 | SBH | 0.000000 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0004790 | RBH | 0.000000 | 0.0 | 0.620122 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0004130 | SBH | 0.134132 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0004680 | RBH | 0.968978 | 0.923680 | 1.727262 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0056800 | SBH | 0.10463 | 0.270119 | 0.10602 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0004600 | RBH | 0.028458 | 0.0 | 0.194113 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0059200 | SBH | 1.0742935 | 4.84075 | 3.963143 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0004450 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0004610 | RBH | 0.000000 | 1.732945 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0004670 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0004630 | RBH | 0.054140 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0004190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G004280 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0004170 | SBH | 0.0 | 0.0 | 0.194386 |
