Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_12g0016750 | OGI:12060120 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr12:21359282-21366536 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | cttgagctcgaatctgcctcgggaaccgcgcgaaggagcagccgccctttggagctccgagaggtcgcggccgcgtggtggtggtgatgccgcggcgagctcgatttggttgagattttGggcgccgatttcgtggccgtggcggcgtcgtcgtcggcgtcggagatggaggcgagcggcgaggagctcctgaagaagatccgggagctggaggtggggcaagcgcagctcaagcaggagatgtccaagctcggcggcgccgccgccgccgcggagcggaggcggtcgcagtcggtctcgccgcggcgcggcgcggcgccgccgccgccgcaccagccgccgctgccggcgaggcggctctccggggggttcgagggcggggcgcgcgcctgggcgcgcggctccgcgtcgttcccgcactcgtcgccgctgcagcgcgagggccgcgccgccgcggccgcgggcggcgggttgacggagaagcagtacaccagggtgttgcagtcgctggggcagtccgtacacattcttgacctcgaagggaagatcatgtactggtgagattttcttcttcttgttctttttttttcatagcatatgctaaatgtttgaggaaatgccgtgtttgatgatgtaggatgatctagtgttgtcgtgtgctttagatgaagtgacccgtatatcggaatgtatcagcttgagatttaggctattttatctctttccaactttgaaacagtactaacccctagaagagactcttgatgcattttggttgtggtctcattttcaccatggatggatttaacaagtttgagcagcagtacacgcacgtacttgaagtaacgaaaccttacgcgtgtaaggctatagtttttttttgactgtgttgaatcaaataaattttgtagtggatgtctagattttagttgcttttagtaatgagtttttgcattctttgaaagggaacttttaccagattgaagaagacattaacttcggtagtacatagcaaagcgataaggcatgtcgtaagttagtggatcaagatcagtagtcaagatttgagcttaacttggtaagctaacactgcttatatgtagatgtaattgatataatattgtctgacgcatattgcttgtggatagaaccatttaggagtacgttagaaaagaaacatagttcgataagcacatacctactcctcaactttgttatcataagctttggtattttcttgcagtctgcaattgtgcacagatcttctcttctccttcctcattaaaccTtgcatttactatgacgcaggaatcgatctgcagagaaactgtatggttatccagcatcagaagcacttggtcaggatggcctcatgctgctgattgattcctgtgatatcaatgtggtaaatgacatcttccgacgcatatctctgggtgagagttggaccggaaagtttccagttaagaacagagctggagatagattttcagctgttgccaccaacactcctttttatgatgaggatggcagtttggtgggcattgtttgcgtttcaagtgatttgcgcacaatggaggagataatcagtggcccttcaatctgtgcaaggccccatccagaatcttctaggacctactgtgaagctagttgcagcaacagcaatcgcaaagccagtttgttgagcagaagcccatttgactctcagcaacctttgcagtctactatagcctccaagataacaaatttggtgagttcttatttctagcaaacagcagatataaatacgaactgcaataaaatattgtctatgtttatttgttcctagcatattcctttttgatttttagaataacaacacaggctacgaaggtcacaaataaagttcgttctagagtcagggcagatgaaaatggcattgagcgggaaggtggtagcggtgagagtcattgttctgatcgtgatgccaaggaggagccaacgtctagtggaacaactacgccaagaggggacgcaccacgcggagcctttgctacagaagagagttcccctgggaaaactgccaaaatgaacagtgatgaatcagaaggaaaagtagggttccacaggatcttgagttcaaaggcagaggcactgctgaacaagaaagggatatcatggccttggaaggggcgggataacgatggacctgatgtgaagaaccaagcaacctggccgtggttgcatggggagcaagatggcagccagaatcatcagaaaatttctgattctgccataactcaagatggtcaaggtgctgaatataaccaacctaacaaaaatgaggcatcaggttcctggtcctctttcaacaataacagcacaagcagtgcaagcagcacgggtagtactaatagtagtgctctttacaaagtagatcatgaagcagattgtttggattatgaaatcctgtgggaagaccttgtcattggagaacaaattggtcaaggtagtccattctccttttttgaatgcttccttaaaacctttgtgcatacaagtattgtatgggagtttttaaaTtttttatgcacagtttcattatttccatagtatttgtccaaacttgccttttctgcatagagttagtttaggatacctactatgctcccctcttcattttctaaatctatatctgttgcataacctctttttatcaagacaactctataatttatcgctcgaccttctgatattctaaataacgttattagcatttcttggccttcgagatgtgatgttcaccgttactatttatagttctaactcattagaaattagtaaaacctacaatattatggaaatagtattagctacagttatgctcaccatatatgcatatacccttaccgtgtaatatcaaatttatctactgttttgctgaattctgtttctaagtccttagctctaacctgagtagaaccaaaccatatagttgctttaactcctaatgagagcctagagctttgggctctttggatagtatcagttttagtatgttttaaaatttgcagtcattttctagctgaccaatccctaggacttcaaacattaggtaaacttgcatccaccaagtaggttgctcttgaacttttccaaacatttgtgtttggacgcttgtaaagcttcaaataagctttgtaggttaagctactcttccaggatctctccatgtctagcctagaaactctggagctgaagcttttctagtgaagccatcgtctattcagttgctaaggcttagatgaaattcaaaaatctcaaaggagtgcaagcatgactaaaatcatatgaacgattaaaatacacacctgtttgtagtgtattatgctgaatgcccttttaaattgtgtccctctcaattttgatctctgcaggctcgtgtggaacagtatatcatgctttgtggtatggctcggtatgttcgattgttccaatgtttcatgaataagtgttatatatttacttttgctattaatttcttcattttctgtggcatgttttgcaggatgtggctgttaaagttttctctaagcaagaatattcagaagaagtgatacagaccttccgacaagaggtagatttccatctccagctacaacatctgaaaataaaccttgtctctctttccagttgactttctttctgttgttaaacctgattagcagtataattgtgatgctttctttttagtttgagaggcttaaaagaaacttgaaatgtaaagccaattcaggttttcaggatgcccataaaacctatcattgccatggttgccaagtatattgatctaagtaaatataaaaataacatactgaaaaagtttgaatatatttgatgattctcaaacatgaatatgaagtactttcagTTtaaatattctacTttttgaatgtatattgttaatcctgtgaaggtatCccttatgaagaaactacgccatcctAatatacttctcttcatgggtgcggttacatctccacAacgcctctgtatcgtaacagagttcctcccacggtatatcccctaccttttaaagacagcttagatttttgaattatctaattgattactatgtgtatgtagtattgctctcttgcaaggctacctgcaattgagcagagctgcttgtttaaatttggttatatcgttgattttgtaataagttatcaaggaattaatgtttaaggccctccccccccccccccccacccaaccagacacacaaaaaaataattaaggataacataggaatcattatccctttccccttgataagcatattatgatgacagtgatggactaaagaaattgaagcgggccactctattattatgcaccgtgcagtgtttggcctgggaacaaaatcttaggttcactctttagaaatgatttttccagctacagatagatgtattgcctaccataataataaatcaagacttcgctaaaagttttacttggattggttctattcatattttgaatagctgatccttttcttgtacttacacaatatttcatctaggtctcattttcatcacattgtttctcgaatgcagtggaagtttgtttcgcttacttcaaaggaacaataccaagttggattggagacgacgtgttcacatggctttagatattgtaagttcatttaatttaatttgtgaacataagttatatatggatttttgtcatatatcaagtcagcaacagatccaaggtttagtaaaagttgcagtaaatgatagggcaaccagtgcaacattctctgatcgcagtgtctaataatagatattgagtaaagttagaatctaaaagtttttttattgaccgaaagaatcaaaaggtgattgtgctgcatgaacttgaaagttgaAtTGCAACATCGCATGTAAaaaaaaagccacgtgtctcagcaagtagttttgggccagctcagttttgcttcatatttgagtgatgaacttgttaatctctgtataattaatatttttttattatcttacatttgtttgccatatgtataattctttagcagttgttagttagttttttttttattttttttaaaaaaatacttctacaggcaagggggatgaactatcttcaccatttcagcccacttattattcatcgggatttaaaatcatccaatcttttggttgataagaactggactgtcaaggtacagtgaagttaatttgcattccaggcctttttgctttttttgcttgccgcctcacattttatccgacttaatcaggttgcagattttggtctttcacgtctcaagcgtgaaacattcctgacaacaaaaactggaaaaggaacagtaagtaccagcatgcataatgtgattagcagaagagctttcccttgcagtttgccctgattaactctattgatgttgacttgatatccagccacaatggatggctccagaggtgttgcgcaatgagccttctgacgagaagtaagttgggacagtcctaatcaataaaaaatcctagtcatgtctgtagaaaatgattactaatgctttccattgctatataggtctgatgtttatagttatGgggtcatcctgtgggagcttgttactcagaagataccctgggaaaatcttaattcgatgcaggtatattcttttgtctttaaaacttattttgaccatatgtttggttatagttatgaccactagattgttaagagcaatatttattttagcagcttcatgtaatgtaaaaaaataTttggatgacagttatcgtagaagtaagcaatagaattaaccatttttgtcggctacattgcttttcctttcattttggtactacaacatgagctagggcctaggagatggtgcatatggatgttgaatcaaactctttgaatgtaatgctggtatgattgttcacccagaaatttgaactttgggcttacaagaaacagttattgtctttttgtatttgtgattttgtagagaccagaaatttcccaagatagtgatattttactgagtagcccagcatgtttgcgcgttgtaactcttattgggctaattctttcttatatcatacttgttgtcaaagttttgactaGggtcgtattaatttgtgagactgtttcttatgtaggtcattggtgcagttggtttcatgaaccacaggttggagattcctagtgaaacagatcctcagtggacatcacttatcctgagttgttgggAaacgtatgcactcttttttCcctttgctttttacggttcatgaaaagttaccttttttctttattatgtcttttgatggacttgaacttctcaaacccttatcttcattgaatgaagttgtattctcttgcctgttacattttctgatgacaaacatatccttgctgtgaacagtgactcacaactccgtccatcgttccaacaacttctggagagacttcgagagctgcaaaggcagtacaatgtccagactcagatgcagcgaaatgcatccgctgctgcaaaaaatagcagcattgaggaatgaatggagatcccttatgaggcgaacgatcAattgacacaattttgcaggcggtgcagcgacacgctagcctgatcaggattcgcacctcccgcgtggttactgctgatgatgctgattgatacagccattgctgaagattgagcaagacgagggagctgcctcctgaatcctcttggcctgaagttccacctgcagcttcggaattctgaccaaggtagagagtactggagctgaggctggcacttttggtgaattcttccatgacaactccaatttatgcctagtcgaatgtcgaccaagctcgactctgtaacgcgaaggcgacaatgatcttgtgtagattgttctgacgatcgacaACcaaattgtattcgagttgctgatcctgattatgcatgaaagttgcaccatcaacattgtaaggttcaacctgttcttttgttctgctctgattccttctctgttactgtaaccatgttgTttagaatCccatcagaacccaatcattcttgctacttcgaccatggatggaagaaatatggaattgtgccttcaatttcacattattcaaactttggctgcaaataatttAaatgtcatctaagaaatacccagtagcattattagatttgacatctgtttttAagttttaacacgaatttattcataaagattgaagt
More
|
||||||||||
| CDS seq | atggaggcgagcggcgaggagctcctgaagaagatccgggagctggaggtggggcaagcgcagctcaagcaggagatgtccaagctcggcggcgccgccgccgccgcggagcggaggcggtcgcagtcggtctcgccgcggcgcggcgcggcgccgccgccgccgcaccagccgccgctgccggcgaggcggctctccggggggttcgagggcggggcgcgcgcctgggcgcgcggctccgcgtcgttcccgcactcgtcgccgctgcagcgcgagggccgcgccgccgcggccgcgggcggcgggttgacggagaagcagtacaccagggtgttgcagtcgctggggcagtccgtacacattcttgacctcgaagggaagatcatgtactggaatcgatctgcagagaaactgtatggttatccagcatcagaagcacttggtcaggatggcctcatgctgctgattgattcctgtgatatcaatgtggtaaatgacatcttccgacgcatatctctgggtgagagttggaccggaaagtttccagttaagaacagagctggagatagattttcagctgttgccaccaacactcctttttatgatgaggatggcagtttggtgggcattgtttgcgtttcaagtgatttgcgcacaatggaggagataatcagtggcccttcaatctgtgcaaggccccatccagaatcttctaggacctactgtgaagctagttgcagcaacagcaatcgcaaagccagtttgttgagcagaagcccatttgactctcagcaacctttgcagtctactatagcctccaagataacaaatttggctacgaaggtcacaaataaagttcgttctagagtcagggcagatgaaaatggcattgagcgggaaggtggtagcggtgagagtcattgttctgatcgtgatgccaaggaggagccaacgtctagtggaacaactacgccaagaggggacgcaccacgcggagcctttgctacagaagagagttcccctgggaaaactgccaaaatgaacagtgatgaatcagaaggaaaagtagggttccacaggatcttgagttcaaaggcagaggcactgctgaacaagaaagggatatcatggccttggaaggggcgggataacgatggacctgatgtgaagaaccaagcaacctggccgtggttgcatggggagcaagatggcagccagaatcatcagaaaatttctgattctgccataactcaagatggtcaaggtgctgaatataaccaacctaacaaaaatgaggcatcaggttcctggtcctctttcaacaataacagcacaagcagtgcaagcagcacgggtagtactaatagtagtgctctttacaaagtagatcatgaagcagattgtttggattatgaaatcctgtgggaagaccttgtcattggagaacaaattggtcaaggctcgtgtggaacagtatatcatgctttgtggtatggctcggatgtggctgttaaagttttctctaagcaagaatattcagaagaagtgatacagaccttccgacaagaggtatCccttatgaagaaactacgccatcctAatatacttctcttcatgggtgcggttacatctccacAacgcctctgtatcgtaacagagttcctcccacgtggaagtttgtttcgcttacttcaaaggaacaataccaagttggattggagacgacgtgttcacatggctttagatattgcaagggggatgaactatcttcaccatttcagcccacttattattcatcgggatttaaaatcatccaatcttttggttgataagaactggactgtcaaggttgcagattttggtctttcacgtctcaagcgtgaaacattcctgacaacaaaaactggaaaaggaacaccacaatggatggctccagaggtgttgcgcaatgagccttctgacgagaagtctgatgtttatagttatGgggtcatcctgtgggagcttgttactcagaagataccctgggaaaatcttaattcgatgcaggtcattggtgcagttggtttcatgaaccacaggttggagattcctagtgaaacagatcctcagtggacatcacttatcctgagttgttgggAaactgactcacaactccgtccatcgttccaacaacttctggagagacttcgagagctgcaaaggcagtacaatgtccagactcagatgcagcgaaatgcatccgctgctgcaaaaaatagcagcattgaggaatga
More
|
||||||||||
| Protein seq | MEASGEELLKKIRELEVGQAQLKQEMSKLGGAAAAAERRRSQSVSPRRGAAPPPPHQPPLPARRLSGGFEGGARAWARGSASFPHSSPLQREGRAAAAAGGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSCDINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRTMEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLATKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEESSPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLHGEQDGSQNHQKISDSAITQDGQGAEYNQPNKNEASGSWSSFNNNSTSSASSTGSTNSSALYKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNNTKLDWRRRVHMALDIARGMNYLHHFSPLIIHRDLKSSNLLVDKNWTVKVADFGLSRLKRETFLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSYGVILWELVTQKIPWENLNSMQVIGAVGFMNHRLEIPSETDPQWTSLILSCWETDSQLRPSFQQLLERLRELQRQYNVQTQMQRNASAAAKNSSIEE |
||||||||||
| Function | Probable serine/threonine-protein kinase SIS8 [UniProtKB/Swiss-Prot:Q9C9U5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0016750 | OsPr106_12g0016750.02 | Chr12 | 21359282 | 21365237 | + | NAM | ||
| CDS seq | atggaggcgagcggcgaggagctcctgaagaagatccgggagctggaggtggggcaagcgcagctcaagcaggagatgtccaagctcggcggcgccgccgccgccgcggagcggaggcggtcgcagtcggtctcgccgcggcgcggcgcggcgccgccgccgccgcaccagccgccgctgccggcgaggcggctctccggggggttcgagggcggggcgcgcgcctgggcgcgcggctccgcgtcgttcccgcactcgtcgccgctgcagcgcgagggccgcgccgccgcggccgcgggcggcgggttgacggagaagcagtacaccagggtgttgcagtcgctggggcagtccgtacacattcttgacctcgaagggaagatcatgtactggaatcgatctgcagagaaactgtatggttatccagcatcagaagcacttggtcaggatggcctcatgctgctgattgattcctgtgatatcaatgtggtaaatgacatcttccgacgcatatctctgggtgagagttggaccggaaagtttccagttaagaacagagctggagatagattttcagctgttgccaccaacactcctttttatgatgaggatggcagtttggtgggcattgtttgcgtttcaagtgatttgcgcacaatggaggagataatcagtggcccttcaatctgtgcaaggccccatccagaatcttctaggacctactgtgaagctagttgcagcaacagcaatcgcaaagccagtttgttgagcagaagcccatttgactctcagcaacctttgcagtctactatagcctccaagataacaaatttggctacgaaggtcacaaataaagttcgttctagagtcagggcagatgaaaatggcattgagcgggaaggtggtagcggtgagagtcattgttctgatcgtgatgccaaggaggagccaacgtctagtggaacaactacgccaagaggggacgcaccacgcggagcctttgctacagaagagagttcccctgggaaaactgccaaaatgaacagtgatgaatcagaaggaaaagtagggttccacaggatcttgagttcaaaggcagaggcactgctgaacaagaaagggatatcatggccttggaaggggcgggataacgatggacctgatgtgaagaaccaagcaacctggccgtggttgcatggggagcaagatggcagccagaatcatcagaaaatttctgattctgccataactcaagatggtcaaggtgctgaatataaccaacctaacaaaaatgaggcatcaggttcctggtcctctttcaacaataacagcacaagcagtgcaagcagcacgggtagtactaatagtagtgctctttacaaagtagatcatgaagcagattgtttggattatgaaatcctgtgggaagaccttgtcattggagaacaaattggtcaaggctcgtgtggaacagtatatcatgctttgtggtatggctcggatgtggctgttaaagttttctctaagcaagaatattcagaagaagtgatacagaccttccgacaagaggtatCccttatgaagaaactacgccatcctAatatacttctcttcatgggtgcggttacatctccacAacgcctctgtatcgtaacagagttcctcccacgtggaagtttgtttcgcttacttcaaaggaacaataccaagttggattggagacgacgtgttcacatggctttagatattgcaagggggatgaactatcttcaccatttcagcccacttattattcatcgggatttaaaatcatccaatcttttggttgataagaactggactgtcaaggttgcagattttggtctttcacgtctcaagcgtgaaacattcctgacaacaaaaactggaaaaggaacagtaagtaccagcatgcataatgtgattagcagaagagctttcccttgcagtttgccctga
More
|
|||||||
| Protein seq | MEASGEELLKKIRELEVGQAQLKQEMSKLGGAAAAAERRRSQSVSPRRGAAPPPPHQPPLPARRLSGGFEGGARAWARGSASFPHSSPLQREGRAAAAAGGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSCDINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRTMEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLATKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEESSPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLHGEQDGSQNHQKISDSAITQDGQGAEYNQPNKNEASGSWSSFNNNSTSSASSTGSTNSSALYKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNNTKLDWRRRVHMALDIARGMNYLHHFSPLIIHRDLKSSNLLVDKNWTVKVADFGLSRLKRETFLTTKTGKGTVSTSMHNVISRRAFPCSLP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0016750 | OsPr106_12g0016750.01 | Chr12 | 21359282 | 21366536 | + | NAM | ||
| CDS seq | atggaggcgagcggcgaggagctcctgaagaagatccgggagctggaggtggggcaagcgcagctcaagcaggagatgtccaagctcggcggcgccgccgccgccgcggagcggaggcggtcgcagtcggtctcgccgcggcgcggcgcggcgccgccgccgccgcaccagccgccgctgccggcgaggcggctctccggggggttcgagggcggggcgcgcgcctgggcgcgcggctccgcgtcgttcccgcactcgtcgccgctgcagcgcgagggccgcgccgccgcggccgcgggcggcgggttgacggagaagcagtacaccagggtgttgcagtcgctggggcagtccgtacacattcttgacctcgaagggaagatcatgtactggaatcgatctgcagagaaactgtatggttatccagcatcagaagcacttggtcaggatggcctcatgctgctgattgattcctgtgatatcaatgtggtaaatgacatcttccgacgcatatctctgggtgagagttggaccggaaagtttccagttaagaacagagctggagatagattttcagctgttgccaccaacactcctttttatgatgaggatggcagtttggtgggcattgtttgcgtttcaagtgatttgcgcacaatggaggagataatcagtggcccttcaatctgtgcaaggccccatccagaatcttctaggacctactgtgaagctagttgcagcaacagcaatcgcaaagccagtttgttgagcagaagcccatttgactctcagcaacctttgcagtctactatagcctccaagataacaaatttggctacgaaggtcacaaataaagttcgttctagagtcagggcagatgaaaatggcattgagcgggaaggtggtagcggtgagagtcattgttctgatcgtgatgccaaggaggagccaacgtctagtggaacaactacgccaagaggggacgcaccacgcggagcctttgctacagaagagagttcccctgggaaaactgccaaaatgaacagtgatgaatcagaaggaaaagtagggttccacaggatcttgagttcaaaggcagaggcactgctgaacaagaaagggatatcatggccttggaaggggcgggataacgatggacctgatgtgaagaaccaagcaacctggccgtggttgcatggggagcaagatggcagccagaatcatcagaaaatttctgattctgccataactcaagatggtcaaggtgctgaatataaccaacctaacaaaaatgaggcatcaggttcctggtcctctttcaacaataacagcacaagcagtgcaagcagcacgggtagtactaatagtagtgctctttacaaagtagatcatgaagcagattgtttggattatgaaatcctgtgggaagaccttgtcattggagaacaaattggtcaaggctcgtgtggaacagtatatcatgctttgtggtatggctcggatgtggctgttaaagttttctctaagcaagaatattcagaagaagtgatacagaccttccgacaagaggtatCccttatgaagaaactacgccatcctAatatacttctcttcatgggtgcggttacatctccacAacgcctctgtatcgtaacagagttcctcccacgtggaagtttgtttcgcttacttcaaaggaacaataccaagttggattggagacgacgtgttcacatggctttagatattgcaagggggatgaactatcttcaccatttcagcccacttattattcatcgggatttaaaatcatccaatcttttggttgataagaactggactgtcaaggttgcagattttggtctttcacgtctcaagcgtgaaacattcctgacaacaaaaactggaaaaggaacaccacaatggatggctccagaggtgttgcgcaatgagccttctgacgagaagtctgatgtttatagttatGgggtcatcctgtgggagcttgttactcagaagataccctgggaaaatcttaattcgatgcaggtcattggtgcagttggtttcatgaaccacaggttggagattcctagtgaaacagatcctcagtggacatcacttatcctgagttgttgggAaactgactcacaactccgtccatcgttccaacaacttctggagagacttcgagagctgcaaaggcagtacaatgtccagactcagatgcagcgaaatgcatccgctgctgcaaaaaatagcagcattgaggaatga
More
|
|||||||
| Protein seq | MEASGEELLKKIRELEVGQAQLKQEMSKLGGAAAAAERRRSQSVSPRRGAAPPPPHQPPLPARRLSGGFEGGARAWARGSASFPHSSPLQREGRAAAAAGGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSCDINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRTMEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLATKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEESSPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLHGEQDGSQNHQKISDSAITQDGQGAEYNQPNKNEASGSWSSFNNNSTSSASSTGSTNSSALYKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNNTKLDWRRRVHMALDIARGMNYLHHFSPLIIHRDLKSSNLLVDKNWTVKVADFGLSRLKRETFLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSYGVILWELVTQKIPWENLNSMQVIGAVGFMNHRLEIPSETDPQWTSLILSCWETDSQLRPSFQQLLERLRELQRQYNVQTQMQRNASAAAKNSSIEE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr12 | 21364584 | 21364793 | + | OsPr106_12g0016750.02 | OsPr106_12g0016750.01,OsPr106_12g0016750.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 16.643642 | 22.940460 | 15.755850 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0562600 | RBH | 1.910295 | 0.570604 | 2.749361 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g37570 | RBH | 2.179900 | 1.133163 | 1.444003 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0562500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0017360 | RBH | 1.042352 | 11.570944 | 6.791826 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0017480 | RBH | 0.381625 | 4.142974 | 1.681865 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0017850 | RBH | 1.981169 | 7.446720 | 9.866451 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0017170 | RBH | 0.307990 | 0.347670 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023830 | RBH | 1.971438 | 2.385758 | 2.159230 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0305900 | RBH | 10.520541 | 16.8465615 | 18.998652 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0016670 | RBH | 0.564525 | 1.032068 | 1.463800 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0337500 | RBH | 14.5943 | 15.3629325 | 19.238286 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0016900 | RBH | 0.693524 | 0.248849 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0017140 | RBH | 0.784126 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0017110 | RBH | 14.111374 | 33.977070 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0017100 | RBH | 1.478551 | 0.0 | 2.024333 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0017260 | RBH | 0.466696 | 8.740726 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G017030 | RBH | 0.604905 | 5.804376 | 2.604701 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0016700 | RBH | 2.161720 | 15.461743 | 7.265716 |
