Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0023830 | OGI:11079660 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:30485504-30492718 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atccctgtttgagatcatccctgcaccaaaaatccaactcataaagaaattcatattttgcaagtgaaattgtgggaacaaaaggaaaaaaagcccaaagccaaaagccaaagccaaaggcaagacagattgtgacagattccatatattgttttgattgtttgctcctatctctaaggaactctccaacctgaaaggattccaacttgaaaccaaagcttgctgcttcttttctctcatttgtctgaaattcatccattttttcagtagacaaggcaagaaaaggcaagttgtgcaaagttttgttcttcagattagcttggaggcaggcaaaagaaaaaaaaaaaaggcgccaaactttgtgtgctcctggatcataggaagaaatatccaagagattggtaaaaaaaggcgccatttttgagagaaaggcgtctccttgcgatcaagctggtgatgtgatcgaagagtagaggcggcgatggaggcggcggagctggtgaagaagatacgggagctggaggagggccaggccgagctcaagcgggagatatccaggatcgtgccggagcgcggcggcgcgcggcggccgccgacgctgcccgcgcagcagaggcgcaccgcgctcccgcaggcggcggcggcggcgccgtcgtcgcggctcctgcagcgcgtgggccgcgccggactCcccgaccggcactacgtcaggatcctgcactcgctggggcaggccgtgcacgtcatctccctcgacggcaagctcatgtattggtgagcctttgttgcttgttttcttgctcatcaggtgcttgacgaaatgctagactagtttgatgcagagggttgaagcgaaatttactgaaattagtttgacggttgagctgtagttcgtgcaatcttgctgctgggaatggtgtattagtgcggtattcctggctaatgtgatggtacctgcattatgacggtgtatagagaaaaatggaggtttagtgggatgaactctgttgctaaattcagaatggagaaatacttttctgtagatgccaggtctttaatttcagtgacatcctctagagttttattaaattagataatgagtatggaagtaaattaatagtggaataattgatcaagtgcctactgtgaatagctatgagtgcaagcaactccaagtatctattccttcttgtattactgtacagagaattgcacttgttttctggaaaaactattagaatgtatggtgcaggacctgaagagacatgttgcaagaataatggttgtagtttcctatttccTtatatgaatatacatctggaatacttttaaggtaactaaatacatagcattgttcaatgcatgtaactatatcagatctcatgcacaatcttatcattaacctgcctcagcaggcatgttttctctaaatttcattttaccacagtttgatgcaacaagtacaacattccttaccagatatttctatttttacttcaacccaggaaccggtacgcggagcatctgtacggctattctgttcctgaagcagttggtcaggatgcccttgaattaattgttcatcctagtgactatggtgcagcaaacgacatcatacagaatatattcatggggaagtgttggagagggaaatttccagttaaacacaagtcaggggagcgtttcaacatcgtcgccagtaacacgcctttgtatgatgatgatggtagcttggtaggcctcatctgtctctcaactgatacgcggacattggaggagatacttggccattcaacctcagggaaagtgtatccgagttcagcaaagccgcgcgttcaactcaatgggtccaaaagtggtttgctaaacAaagtttcttgtgactcccagcaacctcttcaatctgctatcacctccaggataacaaatttggtaagtcatacctctgagcaaacaaaagaattgactataatagaaagtctcttctggtatttcttcatgatttattttgtagtgtatactttgatttttagagtaacaaacacaggctaccagggttacaaatagagttcgctctcgggtcaagacgggtcagaattgcgatgatcagttcggtggtgcctgtgagagccattattctgaacatgatgccagagaagagcagacatctagtgaaggaagcaccccaagtGgggatgttcttcatggggcctttgttagcgaagacaattactctGggaagtcaagcaaaacAaacagtgatgactcaggagaaggaaaactggggcttcacaaaattcttagctcaacagcagaggcactgtgggccaacaggggaattccatggccttggagaggtcatggaaatgatgatgctgggaagaatcgaacgaacttgccacagttccatgaaattcaagagaatggacagagccataaggaagttccagagccaatcatactaccagactgccaagatactgaatttgtccaggaagtcaaatatgaggtttcaggttcctggtggtctttcaatgccagcacaagtagtatgagcagtactggaagcactaatagcagtgctatcgagagagcagatcgtgaagcagactgcctggattttgaaattctgtgggaagacctggcaattggagaacaagttggtcaaggtagttatttctcacttggtaaattttctgtgtacacatgtagaaacacatttacttcaacacatttgtactcaagcataatcactttagttggtttcatgatctctcaatggtcatggtaccatgactagtcttgcatatcaagacaggctacacggatggcactttgcctccatatggTtttttttcgataatggaagctttattaaaactcagtcaaatacaccaagatgatacatttcaactgagcccactCccggcctctgcataaaatgcacacaaccacacacaaagaaagaCctatgaagacccctctcacaaaacagaaatattagtggctatcaatccgtagactagatcgccaaccatgctcctgggtaaaaaaaactcctgtgccaccttgtccaaacgtcgcgataccaccacaatagtatcctgaagacccggtttgtggaggatagctcaggtgcgaagccaccgggtgactaaagtaataacctctagatcgtgaattccaagcccatcttaatctttgggacgacaaataatgtcccacttagcaagccgatattttttcttatgtccatccccttgccaatagaacctagatcgaaagtagtcaagtttcttacataccccgctaggtattgcaaggaaagacatcatatacatttgttctccaaagagcaaatgtatatagcctccatatggttatatctgaaagttaatggaacttccttttgtttacttacgaatgttcatgtgcataattagaaaaaaaatgagggagaaataatctattaattgcctgaattgcCTGctatatgcatacgggcgccgttctgTTtttctaatagatatacttctttccatgtttgaccaaacaggttcttgtggaacagtgtatcatgctctgtggtatggttcggtatgtatgccccattatgtgattattgaagtaacagttaacaataaatcctgaatatttatcatgtccttgtaggatgtggcagttaaagtattctccaaatatgaatactcagaagacatgatactcaccttcaggcaagaggtagatatttactgtcctattgagtcaaataattaggactgcaatttctttttcagattgcacacactagagttcacagggctcatagtagttatgtctttcTttttttctatgtattgacacggtcatatagacaaacatgaaaaataagggtgagctgctgagagacagaatattttttttatcttatgaattgttttaggccgtaatgccatagagatcaataatatgctcttagcTttgtttatcctattattatgatttataatctgtaattatatacatagcccatatttccatctttcatttgtctaggtagcattgatgaagaaactacgccaccccaatgtgatactcttcatgggtgcagttgcgtctctccaacgactttgcattgttacggagtttctgccacggtatgcttcatatctccttcgactgaaagaatcaagacactgtaaaaaattgtgtacatatttccctctggttgtgaatttcttctttattgttgtaagAgagggtgtgtattttgaaaaaggtatatggcttaattatgatgatacagataacagcaaaatttaaatatttattgaggattctcgatgatctatgtcacagtatgaaatctaagtagtacccaacatttgtttttttgtttccactcttcgcaagccagggtgatttgaaggacactttcctgtttaagaagttaacatctaagactgaactttcctgtatacatatattttgaaaagctctgtaaaatttccaatccatagattatgtacctgtgagatgattagagtggggCcataaaatgatgaacctgaagtcttgatggttacagacatagtgatgtataatgtattattaacattagttgtgtagtaagtgaaccttttctttatggaacttgaagtattactgcggatttacttgtgttattcttatgtaattgtttctatgctcataagaggccaaagctttctttcttctttcttttttttgcctacctttactttacaccaaaaactgtaccacataatgcagagggagtttgtttcgcttacttcaaaagaatgctggcaagctggatccaagacggcgagttcacatggctatagacattgtgagtgcattttctcttaaaagctcgttctaaaaatggccagtacattatgttctgcggaacatctgtggcatgagcagattgtaacaaaaactggatgaacattcttcacctgaagaaatcaagagaagttttttactgttatggaattattttcacaaatgtgtagaaaaaaaagctgaattgtgtgtgactaaaccatgtctttaagattcagcatgtgaaatgatgaaatgcaaaaaataaaatgatatcatatatgttccatctaacaaagttgcttcttctatttccccgcaaaaaaggctgcttgttctatattatacattccattactatgatttaactgaggattctatcactgaaatccaatcaataattgaactgatttgattatgatttgaattattgttgttccaaccaacttttgtatcattcttattcttgttgaggctttggaactacaggAATaatatattgtgactccaaattttgttcaataattacatattttgcctgtgtagaaacttcgattaccatgttgtgtttcagaacataacttatatatttctgcaggcaagaggcatgaattatctccacaattccagcccacctattgtccatcgtgatttaaaatcatcaaaccttttggtcgataagaactggactgttaaggtaaatccgaaagttagttctttcttcatatcttttatgtattaattatcttctcattgtttttaattttatcaggttgcggactttggtctttcacgtctcaaactcgaaacatttctgacaacaaaaactggaaaaggaacagtaagtgcaagcaagctctacttaatttcacatggattctccggactgacaagacttagataaattttaaatttgtgctaatgttttctgtttattgcaaaatatcttatttttgttttgatattcagccacaatggatggctccagaggtattacgtaatgaaccttcaaatgaaaagtaagtttaccgttcagaattgctcaacataatttctctgactatccataggtggtttgctcaattttgttttccttttcataaagcataggtctgatgtgtacagctacggagttatcctatgggaaattgctactcagaagataccatgggataatctcaatacaatgcaggtacattttggcaatgtatttgtctgttggttagtttattcatcagagtttttttatcatattattcgttgaaaaactatgcagttgtgaattcgatagcataatttacttatagcatataaaaaaagCaaacctcaataatataattgtgtactggtggtgatattaggacttaacagccgtttgcaagttgcaacaacatatatctttcatcatgtgtttgggtgcactggtcattgtctaaatttatctgcacgtaattttcctgtttcagactatgcttgtcagtttgctgttgctaaaaaaaaaagaccatattatcttgtcaaaatggtcctcattgtcaggataggataggagaagtccataaataccatctctgcaatttatacataagtattagcaatgtgtctaattgaactgttggtaaagcattactagaacatgaaagattcctaacagtgtgatcccaaatgttgcaggttgttggagcagtggggttcatggaccacaggttggacattccaagcgatgttgatcctcattgggcgtcgatgatcgagagttgctgggacaggtgcacatactatatatattttttcgacatttcaacatactacttctttgcaaattccgaagaaacaactgttctcaatgtaaaacaactgatcctagtattcaacaaacctatcctttctgcgagcagtgacccgcagcgtcgcccttcgttccaagaactgctagatcagctccgagatctgcagaagcaatacaacttgcaggctcaactgcagcgaactgcagctgccaagatgagtgttgacgattgctaacttcaaaatctgaatggtccatgttcagcttgttgccaatatgaggtcccagcaggccagcaaaatgggattcgttaggagtccagtctaaccaaaaagggttctgaattctgaacattttgctacttttctgaagaagctgtggcagcaattgagtttgtgccagaaaaagatggtgcattcgatctgaagcctgaagctctgcaactgcaattcaatcaatcttccagcaGtgatgaccgatgaaatttcggcagtcatcgaatacaatgctgtattcaccctattaaccatgtacatgatttttttaaaaagaaaaggttgttgttggtattctgcaat
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| CDS seq | atggaggcggcggagctggtgaagaagatacgggagctggaggagggccaggccgagctcaagcgggagatatccaggatcgtgccggagcgcggcggcgcgcggcggccgccgacgctgcccgcgcagcagaggcgcaccgcgctcccgcaggcggcggcggcggcgccgtcgtcgcggctcctgcagcgcgtgggccgcgccggactCcccgaccggcactacgtcaggatcctgcactcgctggggcaggccgtgcacgtcatctccctcgacggcaagctcatgaaccggtacgcggagcatctgtacggctattctgttcctgaagcagttggtcaggatgcccttgaattaattgttcatcctagtgactatggtgcagcaaacgacatcatacagaatatattcatggggaagtgttggagagggaaatttccagttaaacacaagtcaggggagcgtttcaacatcgtcgccagtaacacgcctttgtatgatgatgatggtagcttggtaggcctcatctgtctctcaactgatacgcggacattggaggagatacttggccattcaacctcagggaaagtgtatccgagttcagcaaagccgcgcgttcaactcaatgggtccaaaagtggtttgctaaacAaagtttcttgtgactcccagcaacctcttcaatctgctatcacctccaggataacaaatttggctaccagggttacaaatagagttcgctctcgggtcaagacgggtcagaattgcgatgatcagttcggtggtgcctgtgagagccattattctgaacatgatgccagagaagagcagacatctagtgaaggaagcaccccaagtGgggatgttcttcatggggcctttgttagcgaagacaattactctGggaagtcaagcaaaacAaacagtgatgactcaggagaaggaaaactggggcttcacaaaattcttagctcaacagcagaggcactgtgggccaacaggggaattccatggccttggagaggtcatggaaatgatgatgctgggaagaatcgaacgaacttgccacagttccatgaaattcaagagaatggacagagccataaggaagttccagagccaatcatactaccagactgccaagatactgaatttgtccaggaagtcaaatatgaggtttcaggttcctggtggtctttcaatgccagcacaagtagtatgagcagtactggaagcactaatagcagtgctatcgagagagcagatcgtgaagcagactgcctggattttgaaattctgtgggaagacctggcaattggagaacaagttggtcaaggttcttgtggaacagtgtatcatgctctgtggtatggttcggatgtggcagttaaagtattctccaaatatgaatactcagaagacatgatactcaccttcaggcaagaggtagcattgatgaagaaactacgccaccccaatgtgatactcttcatgggtgcagttgcgtctctccaacgactttgcattgttacggagtttctgccacgagggagtttgtttcgcttacttcaaaagaatgctggcaagctggatccaagacggcgagttcacatggctatagacattgcaagaggcatgaattatctccacaattccagcccacctattgtccatcgtgatttaaaatcatcaaaccttttggtcgataagaactggactgttaaggttgcggactttggtctttcacgtctcaaactcgaaacatttctgacaacaaaaactggaaaaggaacaccacaatggatggctccagaggtattacgtaatgaaccttcaaatgaaaagtctgatgtgtacagctacggagttatcctatgggaaattgctactcagaagataccatgggataatctcaatacaatgcaggttgttggagcagtggggttcatggaccacaggttggacattccaagcgatgttgatcctcattgggcgtcgatgatcgagagttgctgggacagtgacccgcagcgtcgcccttcgttccaagaactgctagatcagctccgagatctgcagaagcaatacaacttgcaggctcaactgcagcgaactgcagctgccaagatgagtgttgacgattgctaa
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| Protein seq | MEAAELVKKIRELEEGQAELKREISRIVPERGGARRPPTLPAQQRRTALPQAAAAAPSSRLLQRVGRAGLPDRHYVRILHSLGQAVHVISLDGKLMNRYAEHLYGYSVPEAVGQDALELIVHPSDYGAANDIIQNIFMGKCWRGKFPVKHKSGERFNIVASNTPLYDDDGSLVGLICLSTDTRTLEEILGHSTSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAITSRITNLATRVTNRVRSRVKTGQNCDDQFGGACESHYSEHDAREEQTSSEGSTPSGDVLHGAFVSEDNYSGKSSKTNSDDSGEGKLGLHKILSSTAEALWANRGIPWPWRGHGNDDAGKNRTNLPQFHEIQENGQSHKEVPEPIILPDCQDTEFVQEVKYEVSGSWWSFNASTSSMSSTGSTNSSAIERADREADCLDFEILWEDLAIGEQVGQGSCGTVYHALWYGSDVAVKVFSKYEYSEDMILTFRQEVALMKKLRHPNVILFMGAVASLQRLCIVTEFLPRGSLFRLLQKNAGKLDPRRRVHMAIDIARGMNYLHNSSPPIVHRDLKSSNLLVDKNWTVKVADFGLSRLKLETFLTTKTGKGTPQWMAPEVLRNEPSNEKSDVYSYGVILWEIATQKIPWDNLNTMQVVGAVGFMDHRLDIPSDVDPHWASMIESCWDSDPQRRPSFQELLDQLRDLQKQYNLQAQLQRTAAAKMSVDDC |
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| Function | Serine/threonine-protein kinase EDR1 [UniProtKB/Swiss-Prot:Q9FPR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0023830 | OsPr106_11g0023830.02 | Chr11 | 30485504 | 30491471 | + | NAM | ||
| CDS seq | atggaggcggcggagctggtgaagaagatacgggagctggaggagggccaggccgagctcaagcgggagatatccaggatcgtgccggagcgcggcggcgcgcggcggccgccgacgctgcccgcgcagcagaggcgcaccgcgctcccgcaggcggcggcggcggcgccgtcgtcgcggctcctgcagcgcgtgggccgcgccggactCcccgaccggcactacgtcaggatcctgcactcgctggggcaggccgtgcacgtcatctccctcgacggcaagctcatgtattggaaccggtacgcggagcatctgtacggctattctgttcctgaagcagttggtcaggatgcccttgaattaattgttcatcctagtgactatggtgcagcaaacgacatcatacagaatatattcatggggaagtgttggagagggaaatttccagttaaacacaagtcaggggagcgtttcaacatcgtcgccagtaacacgcctttgtatgatgatgatggtagcttggtaggcctcatctgtctctcaactgatacgcggacattggaggagatacttggccattcaacctcagggaaagtgtatccgagttcagcaaagccgcgcgttcaactcaatgggtccaaaagtggtttgctaaacAaagtttcttgtgactcccagcaacctcttcaatctgctatcacctccaggataacaaatttggctaccagggttacaaatagagttcgctctcgggtcaagacgggtcagaattgcgatgatcagttcggtggtgcctgtgagagccattattctgaacatgatgccagagaagagcagacatctagtgaaggaagcaccccaagtGgggatgttcttcatggggcctttgttagcgaagacaattactctGggaagtcaagcaaaacAaacagtgatgactcaggagaaggaaaactggggcttcacaaaattcttagctcaacagcagaggcactgtgggccaacaggggaattccatggccttggagaggtcatggaaatgatgatgctgggaagaatcgaacgaacttgccacagttccatgaaattcaagagaatggacagagccataaggaagttccagagccaatcatactaccagactgccaagatactgaatttgtccaggaagtcaaatatgaggtttcaggttcctggtggtctttcaatgccagcacaagtagtatgagcagtactggaagcactaatagcagtgctatcgagagagcagatcgtgaagcagactgcctggattttgaaattctgtgggaagacctggcaattggagaacaagttggtcaaggttcttgtggaacagtgtatcatgctctgtggtatggttcggatgtggcagttaaagtattctccaaatatgaatactcagaagacatgatactcaccttcaggcaagaggtagcattgatgaagaaactacgccaccccaatgtgatactcttcatgggtgcagttgcgtctctccaacgactttgcattgttacggagtttctgccacgagggagtttgtttcgcttacttcaaaagaatgctggcaagctggatccaagacggcgagttcacatggctatagacattgcaagaggcatgaattatctccacaattccagcccacctattgtccatcgtgatttaaaatcatcaaaccttttggtcgataagaactggactgttaagtaa
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| Protein seq | MEAAELVKKIRELEEGQAELKREISRIVPERGGARRPPTLPAQQRRTALPQAAAAAPSSRLLQRVGRAGLPDRHYVRILHSLGQAVHVISLDGKLMYWNRYAEHLYGYSVPEAVGQDALELIVHPSDYGAANDIIQNIFMGKCWRGKFPVKHKSGERFNIVASNTPLYDDDGSLVGLICLSTDTRTLEEILGHSTSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAITSRITNLATRVTNRVRSRVKTGQNCDDQFGGACESHYSEHDAREEQTSSEGSTPSGDVLHGAFVSEDNYSGKSSKTNSDDSGEGKLGLHKILSSTAEALWANRGIPWPWRGHGNDDAGKNRTNLPQFHEIQENGQSHKEVPEPIILPDCQDTEFVQEVKYEVSGSWWSFNASTSSMSSTGSTNSSAIERADREADCLDFEILWEDLAIGEQVGQGSCGTVYHALWYGSDVAVKVFSKYEYSEDMILTFRQEVALMKKLRHPNVILFMGAVASLQRLCIVTEFLPRGSLFRLLQKNAGKLDPRRRVHMAIDIARGMNYLHNSSPPIVHRDLKSSNLLVDKNWTVK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0023830 | OsPr106_11g0023830.03 | Chr11 | 30485985 | 30492715 | + | NAM | ||
| CDS seq | atggaggcggcggagctggtgaagaagatacgggagctggaggagggccaggccgagctcaagcgggagatatccaggatcgtgccggagcgcggcggcgcgcggcggccgccgacgctgcccgcgcagcagaggcgcaccgcgctcccgcaggcggcggcggcggcgccgtcgtcgcggctcctgcagcgcgtgggccgcgccggactCcccgaccggcactacgtcaggatcctgcactcgctggggcaggccgtgcacgtcatctccctcgacggcaagctcatgaaccggtacgcggagcatctgtacggctattctgttcctgaagcagttggtcaggatgcccttgaattaattgttcatcctagtgactatggtgcagcaaacgacatcatacagaatatattcatggggaagtgttggagagggaaatttccagttaaacacaagtcaggggagcgtttcaacatcgtcgccagtaacacgcctttgtatgatgatgatggtagcttggtaggcctcatctgtctctcaactgatacgcggacattggaggagatacttggccattcaacctcagggaaagtgtatccgagttcagcaaagccgcgcgttcaactcaatgggtccaaaagtggtttgctaaacAaagtttcttgtgactcccagcaacctcttcaatctgctatcacctccaggataacaaatttggctaccagggttacaaatagagttcgctctcgggtcaagacgggtcagaattgcgatgatcagttcggtggtgcctgtgagagccattattctgaacatgatgccagagaagagcagacatctagtgaaggaagcaccccaagtGgggatgttcttcatggggcctttgttagcgaagacaattactctGggaagtcaagcaaaacAaacagtgatgactcaggagaaggaaaactggggcttcacaaaattcttagctcaacagcagaggcactgtgggccaacaggggaattccatggccttggagaggtcatggaaatgatgatgctgggaagaatcgaacgaacttgccacagttccatgaaattcaagagaatggacagagccataaggaagttccagagccaatcatactaccagactgccaagatactgaatttgtccaggaagtcaaatatgaggtttcaggttcctggtggtctttcaatgccagcacaagtagtatgagcagtactggaagcactaatagcagtgctatcgagagagcagatcgtgaagcagactgcctggattttgaaattctgtgggaagacctggcaattggagaacaagttggtcaaggttcttgtggaacagtgtatcatgctctgtggtatggttcggatgtggcagttaaagtattctccaaatatgaatactcagaagacatgatactcaccttcaggcaagaggtagcattgatgaagaaactacgccaccccaatgtgatactcttcatgggtgcagttgcgtctctccaacgactttgcattgttacggagtttctgccacgagggagtttgtttcgcttacttcaaaagaatgctggcaagctggatccaagacggcgagttcacatggctatagacattgcaagaggcatgaattatctccacaattccagcccacctattgtccatcgtgatttaaaatcatcaaaccttttggtcgataagaactggactgttaaggttgcggactttggtctttcacgtctcaaactcgaaacatttctgacaacaaaaactggaaaaggaacaccacaatggatggctccagaggtattacgtaatgaaccttcaaatgaaaagtctgatgtgtacagctacggagttatcctatgggaaattgctactcagaagataccatgggataatctcaatacaatgcaggttgttggagcagtggggttcatggaccacaggttggacattccaagcgatgttgatcctcattgggcgtcgatgatcgagagttgctgggacagtgacccgcagcgtcgcccttcgttccaagaactgctagatcagctccgagatctgcagaagcaatacaacttgcaggctcaactgcagcgaactgcagctgccaagatgagtgttgacgattgctaa
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| Protein seq | MEAAELVKKIRELEEGQAELKREISRIVPERGGARRPPTLPAQQRRTALPQAAAAAPSSRLLQRVGRAGLPDRHYVRILHSLGQAVHVISLDGKLMNRYAEHLYGYSVPEAVGQDALELIVHPSDYGAANDIIQNIFMGKCWRGKFPVKHKSGERFNIVASNTPLYDDDGSLVGLICLSTDTRTLEEILGHSTSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAITSRITNLATRVTNRVRSRVKTGQNCDDQFGGACESHYSEHDAREEQTSSEGSTPSGDVLHGAFVSEDNYSGKSSKTNSDDSGEGKLGLHKILSSTAEALWANRGIPWPWRGHGNDDAGKNRTNLPQFHEIQENGQSHKEVPEPIILPDCQDTEFVQEVKYEVSGSWWSFNASTSSMSSTGSTNSSAIERADREADCLDFEILWEDLAIGEQVGQGSCGTVYHALWYGSDVAVKVFSKYEYSEDMILTFRQEVALMKKLRHPNVILFMGAVASLQRLCIVTEFLPRGSLFRLLQKNAGKLDPRRRVHMAIDIARGMNYLHNSSPPIVHRDLKSSNLLVDKNWTVKVADFGLSRLKLETFLTTKTGKGTPQWMAPEVLRNEPSNEKSDVYSYGVILWEIATQKIPWDNLNTMQVVGAVGFMDHRLDIPSDVDPHWASMIESCWDSDPQRRPSFQELLDQLRDLQKQYNLQAQLQRTAAAKMSVDDC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0023830 | OsPr106_11g0023830.01 | Chr11 | 30485504 | 30492718 | + | NAM | ||
| CDS seq | atggaggcggcggagctggtgaagaagatacgggagctggaggagggccaggccgagctcaagcgggagatatccaggatcgtgccggagcgcggcggcgcgcggcggccgccgacgctgcccgcgcagcagaggcgcaccgcgctcccgcaggcggcggcggcggcgccgtcgtcgcggctcctgcagcgcgtgggccgcgccggactCcccgaccggcactacgtcaggatcctgcactcgctggggcaggccgtgcacgtcatctccctcgacggcaagctcatgtattggaaccggtacgcggagcatctgtacggctattctgttcctgaagcagttggtcaggatgcccttgaattaattgttcatcctagtgactatggtgcagcaaacgacatcatacagaatatattcatggggaagtgttggagagggaaatttccagttaaacacaagtcaggggagcgtttcaacatcgtcgccagtaacacgcctttgtatgatgatgatggtagcttggtaggcctcatctgtctctcaactgatacgcggacattggaggagatacttggccattcaacctcagggaaagtgtatccgagttcagcaaagccgcgcgttcaactcaatgggtccaaaagtggtttgctaaacAaagtttcttgtgactcccagcaacctcttcaatctgctatcacctccaggataacaaatttggctaccagggttacaaatagagttcgctctcgggtcaagacgggtcagaattgcgatgatcagttcggtggtgcctgtgagagccattattctgaacatgatgccagagaagagcagacatctagtgaaggaagcaccccaagtGgggatgttcttcatggggcctttgttagcgaagacaattactctGggaagtcaagcaaaacAaacagtgatgactcaggagaaggaaaactggggcttcacaaaattcttagctcaacagcagaggcactgtgggccaacaggggaattccatggccttggagaggtcatggaaatgatgatgctgggaagaatcgaacgaacttgccacagttccatgaaattcaagagaatggacagagccataaggaagttccagagccaatcatactaccagactgccaagatactgaatttgtccaggaagtcaaatatgaggtttcaggttcctggtggtctttcaatgccagcacaagtagtatgagcagtactggaagcactaatagcagtgctatcgagagagcagatcgtgaagcagactgcctggattttgaaattctgtgggaagacctggcaattggagaacaagttggtcaaggttcttgtggaacagtgtatcatgctctgtggtatggttcggatgtggcagttaaagtattctccaaatatgaatactcagaagacatgatactcaccttcaggcaagaggtagcattgatgaagaaactacgccaccccaatgtgatactcttcatgggtgcagttgcgtctctccaacgactttgcattgttacggagtttctgccacgagggagtttgtttcgcttacttcaaaagaatgctggcaagctggatccaagacggcgagttcacatggctatagacattgcaagaggcatgaattatctccacaattccagcccacctattgtccatcgtgatttaaaatcatcaaaccttttggtcgataagaactggactgttaaggttgcggactttggtctttcacgtctcaaactcgaaacatttctgacaacaaaaactggaaaaggaacaccacaatggatggctccagaggttgttggagcagtggggttcatggaccacaggttggacattccaagcgatgttgatcctcattgggcgtcgatgatcgagagttgctgggacagtgacccgcagcgtcgcccttcgttccaagaactgctagatcagctccgagatctgcagaagcaatacaacttgcaggctcaactgcagcgaactgcagctgccaagatgagtgttgacgattgctaa
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| Protein seq | MEAAELVKKIRELEEGQAELKREISRIVPERGGARRPPTLPAQQRRTALPQAAAAAPSSRLLQRVGRAGLPDRHYVRILHSLGQAVHVISLDGKLMYWNRYAEHLYGYSVPEAVGQDALELIVHPSDYGAANDIIQNIFMGKCWRGKFPVKHKSGERFNIVASNTPLYDDDGSLVGLICLSTDTRTLEEILGHSTSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAITSRITNLATRVTNRVRSRVKTGQNCDDQFGGACESHYSEHDAREEQTSSEGSTPSGDVLHGAFVSEDNYSGKSSKTNSDDSGEGKLGLHKILSSTAEALWANRGIPWPWRGHGNDDAGKNRTNLPQFHEIQENGQSHKEVPEPIILPDCQDTEFVQEVKYEVSGSWWSFNASTSSMSSTGSTNSSAIERADREADCLDFEILWEDLAIGEQVGQGSCGTVYHALWYGSDVAVKVFSKYEYSEDMILTFRQEVALMKKLRHPNVILFMGAVASLQRLCIVTEFLPRGSLFRLLQKNAGKLDPRRRVHMAIDIARGMNYLHNSSPPIVHRDLKSSNLLVDKNWTVKVADFGLSRLKLETFLTTKTGKGTPQWMAPEVVGAVGFMDHRLDIPSDVDPHWASMIESCWDSDPQRRPSFQELLDQLRDLQKQYNLQAQLQRTAAAKMSVDDC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr11 | 30486271 | 30487009 | + | OsPr106_11g0023830.02,OsPr106_11g0023830.01 | OsPr106_11g0023830.03,OsPr106_11g0023830.02,OsPr106_11g0023830.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.971438 | 2.385758 | 2.159230 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0678000 | RBH | 0.693318 | 1.603514 | 1.674132 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45280 | RBH | 0.608206 | 1.002679 | 0.419268 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0678000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023920 | RBH | 0.609199 | 54.542740 | 3.541677 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023610 | RBH | 0.038202 | 2.751530 | 0.301558 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023250 | RBH | 1.121356 | 10.170435 | 2.066834 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023210 | RBH | 0.077487 | 0.361866 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0016750 | RBH | 16.643642 | 22.940460 | 15.755850 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0424100 | RBH | 2.09662 | 24.128329 | 0.433957 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024140 | RBH | 0.308424 | 0.468116 | 0.394672 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0433300 | RBH | 12.9982085 | 96.731735 | 25.4280875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023890 | RBH | 0.080734 | 0.131174 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023890 | RBH | 0.221293 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023460 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023150 | RBH | 0.064113 | 0.0 | 0.523483 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023370 | RBH | 0.155779 | 5.685730 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023440 | RBH | 0.545073 | 6.742310 | 2.836434 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023870 | RBH | 1.396027 | 76.272987 | 5.452818 |
